Articles | Volume 16, issue 2
https://doi.org/10.5194/essd-16-1107-2024
© Author(s) 2024. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/essd-16-1107-2024
© Author(s) 2024. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Data description article
| 
27 Feb 2024
Data description article |
| 27 Feb 2024
| 27 Feb 2024
A global database of dissolved organic matter (DOM) concentration measurements in coastal waters (CoastDOM v1)
Section for Marine Diversity and Experimental Ecology, Department of Ecoscience, Aarhus University, 4000 Roskilde, Denmark
Cátia Carreira
Centre for Environmental and Marine Studies (CESAM), University of Aveiro, Portugal
Gwenaël Abril
Laboratoire de Biologie des Organismes et Ecosystèmes Aquatiques (BOREA), CNRS, Muséum National d'Histoire Naturelle, 61 Rue Buffon, 75005, Paris, France
Susana Agustí
King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
Valentina Amaral
Departamento Interdisciplinario de Sistemas Costero Marinos, Centro Universitario Regional Este, Universidad de la República, Ruta 9 y 15, CP 27000, Rocha, Uruguay
Agneta Andersson
Umeå Marine Sciences Centre, Umeå University, Sweden
Javier Arístegui
Instituto de Oceanografía y Cambio Global (IOCAG), Universidad de Las Palmas de Gran Canaria, Las Palmas, Spain
Punyasloke Bhadury
Centre for Climate and Environmental Studies, Indian Institute of Science Education and Research Kolkata, Mohanpur, Nadia, West Bengal, India
Mariana B. Bif
Monterey Bay Aquarium Research Institute, Moss Landing, California, United States
Alberto V. Borges
Chemical Oceanography Unit, University of Liège, Liège, Belgium
Steven Bouillon
Department of Earth and Environmental Sciences, KU Leuven, Leuven, Belgium
Maria Ll. Calleja
Marine Ecology and Systematics (MarES), Department of Biology, Universitat de les Illes Balears, 07122 Palma de Mallorca, Spain
Luiz C. Cotovicz Jr.
Departamento de Geoquímica, Universidade Federal Fluminense, Outeiro São João Batista s/n, 24020015 Niterói, Rio de Janeiro, Brazil
Leibniz Institute for Baltic Sea Research Warnemünde, 18119 Rostock-Warnemünde, Germany
Stefano Cozzi
Consiglio Nazionale delle Ricerche, Istituto di Scienze Marine (CNR-ISMAR), Strada Statale 14, km 163.5, 34149 Trieste, Italy
Maryló Doval
Instituto Tecnolóxico para o Control do Medio Mariño de Galicia, 36611 Vilagarcía de Arousa, Spain
Carlos M. Duarte
King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
Bradley Eyre
Centre for Coastal Biogeochemistry, Faculty of Science and Engineering, Southern Cross University, Lismore, NSW, 2480, Australia
Cédric G. Fichot
Department of Earth and Environment, Boston University, Boston, Massachusetts, United States
E. Elena García-Martín
National Oceanography Centre, European Way, Southampton, SO14 3ZH, United Kingdom
Alexandra Garzon-Garcia
Department of Environment and Science, PO Box 5078, Brisbane, QLD, 4001, Australia
Michele Giani
National Institute of Oceanography and Applied Geophysics (OGS), Trieste, Italy
Istituto Centrale per la Ricerca scientifica e tecnologia Applicata al Mare, Chioggia, Italy
Rafael Gonçalves-Araujo
National Institute of Aquatic Resources, Technical University of Denmark, Kongens Lyngby, Denmark
Renee Gruber
Australian Institute of Marine Science, PMB 3, Townsville, QLD, 4810, Australia
Dennis A. Hansell
Department of Ocean Sciences, Rosenstiel School of Marine, Atmospheric & Earth Science, University of Miami, Miami, Florida, United States
Fuminori Hashihama
Department of Ocean Sciences, Tokyo University of Marine Science and Technology, Japan
Department of Ocean Science and Center for Ocean Research in Hong Kong and Macau, The Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong, China
Johnna M. Holding
Department of Ecoscience, Aarhus University, 8000 Aarhus, Denmark
William R. Hunter
Fisheries and Aquatic Ecosystems Branch, Agri-Food and Biosciences Institute, Belfast, Northern Ireland, United Kingdom
J. Severino P. Ibánhez
CSIC, Instituto de Investigacións Mariñas, Eduardo Cabello 6, 36208 Vigo, Spain
Valeria Ibello
Institute of Marine Sciences, Middle East Technical University, 33731 Erdemli, Mersin, Türkiye
Shan Jiang
State Key Laboratory of Estuarine and Coastal Research, East China Normal University, 200241, Shanghai, China
Guebuem Kim
School of Earth and Environmental Sciences, Seoul National University, Seoul 08826, South Korea
Katja Klun
Marine Biology Station, National Institute of Biology, Fornače 41, 6330 Piran, Slovenia
Piotr Kowalczuk
Remote Sensing Laboratory, Institute of Oceanology, Polish Academy of Sciences, Sopot, Poland
Atsushi Kubo
Department of Geosciences, Shizuoka University, 836 Ohya, Suruga-ku, Shizuoka, 422-8529, Japan
Choon-Weng Lee
Laboratory of Microbial Ecology, Institute of Biological Sciences, Institute of Ocean and Earth Sciences, Universiti Malaya, 50603 Kuala Lumpur, Malaysia
Cláudia B. Lopes
CICECO – Aveiro Institute of Materials, Department of Chemistry, University of Aveiro, Campus de Santiago, 3810-193 Aveiro, Portugal
Federica Maggioni
ENTROPIE, IRD, Université de la Réunion, CNRS, IFREMER, Université de Nouvelle-Calédonie, Nouméa 98800, New Caledonia
Paolo Magni
Consiglio Nazionale delle Ricerche, Istituto per lo studio degli impatti Antropici e Sostenibilità in ambiente marino (CNR-IAS), Loc. Sa Mardini, Torregrande, 09170, Oristano, Italy
Celia Marrase
Institut de Ciències del Mar (CSIC), Passeig Marítim de la Barceloneta, 37, 08003 Barcelona, Spain
Patrick Martin
Asian School of the Environment, Nanyang Technological University, 639798, Singapore
S. Leigh McCallister
Virginia Commonwealth University, Department of Biology, Richmond, Virginia, United States
Roisin McCallum
Centre for Marine Ecosystems Research, School of Science, Edith Cowan University, 270 Joondalup Drive, Joondalup, WA, 6027, Australia
Patricia M. Medeiros
Department of Marine Sciences, University of Georgia, Athens, Georgia, United States
Xosé Anxelu G. Morán
King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
Centro Oceanográfico de Gijón/Xixón (IEO-CSIC), 33212 Gijón/Xixón, Spain
Frank E. Muller-Karger
College of Marine Science, University of South Florida, Saint Petersburg, Florida 33701, United States
Allison Myers-Pigg
Pacific Northwest National Laboratory, Marine and Coastal Research Laboratory, Sequim, Washington, United States
Marit Norli
Norwegian Institute for Water Research, Oslo, Norway
Joanne M. Oakes
Centre for Coastal Biogeochemistry, Faculty of Science and Engineering, Southern Cross University, Lismore, NSW, 2480, Australia
Helena Osterholz
Leibniz Institute for Baltic Sea Research Warnemünde, 18119 Rostock-Warnemünde, Germany
Hyekyung Park
School of Earth and Environmental Sciences, Seoul National University, Seoul 08826, South Korea
Maria Lund Paulsen
Marine microbiology, University of Bergen, Bergen, Norway
Judith A. Rosentreter
Centre for Coastal Biogeochemistry, Faculty of Science and Engineering, Southern Cross University, Lismore, NSW, 2480, Australia
Yale School of the Environment, Yale University, New Haven, Connecticut, United States
Jeff D. Ross
Institute for Marine and Antarctic Studies, University of Tasmania, Private Bag 49, Hobart, TAS, 7001, Australia
Digna Rueda-Roa
College of Marine Science, University of South Florida, Saint Petersburg, Florida 33701, United States
Chiara Santinelli
Biophysics Institute, CNR, Pisa, Italy
Yuan Shen
State Key Laboratory of Marine Environmental Science (MEL) & College of Ocean and Earth Sciences, Xiamen University, China
Eva Teira
Departamento de Ecología y Biología Animal, Universidade de Vigo, Centro de Investigacion Mariña da Universidade de Vigo (CIM-UVigo), Vigo, Spain
Tinkara Tinta
Marine Biology Station, National Institute of Biology, Fornače 41, 6330 Piran, Slovenia
Guenther Uher
School of Natural and Environmental Science, Newcastle University, Newcastle upon Tyne, United Kingdom
Masahide Wakita
Mutsu Institute for Oceanography, Research Institute for Global Change, Japan Agency for Marine-Earth Science and Technology, 690 Kitasekine, Sekine, Mutsu, Aomori, Japan
Nicholas Ward
Pacific Northwest National Laboratory, Marine and Coastal Research Laboratory, Sequim, Washington, United States
Kenta Watanabe
Coastal and Estuarine Environment Research Group, Port and Airport Research Institute, Yokosuka 239-0826, Japan
Yu Xin
Key Laboratory of Marine Chemistry Theory and Technology, Ministry of Education, Institute for Advanced Ocean Study, Ocean University of China, Qingdao, Shandong, China
Youhei Yamashita
Faculty of Environmental Earth Science, Hokkaido University, Hokkaido 060-0810, Japan
Liyang Yang
College of Environment and Safety Engineering, Fuzhou University, China
Jacob Yeo
Centre for Coastal Biogeochemistry, Faculty of Science and Engineering, Southern Cross University, Lismore, NSW, 2480, Australia
Huamao Yuan
Key Laboratory of Marine Ecology and Environmental Sciences, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China
Qiang Zheng
State Key Laboratory of Marine Environmental Science (MEL) & College of Ocean and Earth Sciences, Xiamen University, China
Fujian Key Laboratory of Marine Carbon Sequestration, Xiamen University, Xiamen 361102, China
Xosé Antón Álvarez-Salgado
CSIC, Instituto de Investigacións Mariñas, Eduardo Cabello 6, 36208 Vigo, Spain
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Yuzo Miyazaki, Yunhan Wang, Eri Tachibana, Koji Suzuki, Youhei Yamashita, and Jun Nishioka
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It is essential to understand how biologically productive oceanic regions during spring phytoplankton blooms after sea ice melting contribute to the sea-to-air emission flux of atmospheric organic aerosols (OAs) in the subarctic oceans. Our shipboard measurements highlight the preferential formation of N-containing secondary water-soluble OAs associated with the predominant diatoms including ice algae during the bloom after sea ice melting/retreat in the subarctic ocean.
Junyan Ding, Nate McDowell, Vanessa Bailey, Nate Conroy, Donnie J. Day, Yilin Fang, Kenneth M. Kemner, Matthew L. Kirwan, Charlie D. Koven, Matthew Kovach, Patrick Megonigal, Kendalynn A. Morris, Teri O'Meara, Stephanie C. Pennington, Roberta B. Peixoto, Peter Thornton, Mike Weintraub, Peter Regier, Leticia Sandoval, Fausto Machado-Silva, Alice Stearns, Nick Ward, and Stephanie J. Wilson
Biogeosciences, 22, 6963–6978, https://doi.org/10.5194/bg-22-6963-2025, https://doi.org/10.5194/bg-22-6963-2025, 2025
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We used a vegetation model to study why coastal forests are dying due to rising water levels and what happens to the ecosystem when marshes take over. We found that tree death is mainly caused by water-damaged roots, leading to major changes in the environment, such as reduced water use and carbon storage. Our study helps explain how coastal ecosystems are shifting and offers new ideas to explore in future field research.
Isabel Seguro, Kevin Vikström, Jonathan D. Todd, Stephen J. Giovannoni, E. Elena García-Martín, Robert Utting, and Carol Robinson
Biogeosciences, 22, 6225–6242, https://doi.org/10.5194/bg-22-6225-2025, https://doi.org/10.5194/bg-22-6225-2025, 2025
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This study is the first to test the iodonitrotetrazolium reduction (INTR) method for respiration in prokaryotes. The method was successfully used with γ-proteobacteria, α-proteobacteria (including SAR11), actinobacteria and cyanobacteria. We show that the current use of a single conversion from INTR to oxygen consumption may not be universally applicable but should be determined for each community. The results provide further confidence in the INT method to determine plankton respiration.
Maggi M. Laan, Stephanie G. Fulton, Vanessa A. Garayburu-Caruso, Morgan E. Barnes, Mikayla A. Borton, Xingyuan Chen, Yuliya Farris, Brieanne Forbes, Amy E. Goldman, Samantha Grieger, Robert O. Hall Jr., Matthew H. Kaufman, Xinming Lin, Erin L. M. Zionce, Sophia A. McKever, Allison Myers-Pigg, Opal Otenburg, Aaron C. Pelly, Huiying Ren, Lupita Renteria, Timothy D. Scheibe, Kyongho Son, Jerry Tagestad, Joshua M. Torgeson, and James C. Stegen
Biogeosciences, 22, 6137–6152, https://doi.org/10.5194/bg-22-6137-2025, https://doi.org/10.5194/bg-22-6137-2025, 2025
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Respiration is a process that combines carbon and oxygen to generate energy for living organisms. Within a river, respiration in sediments and water makes variable contributions to the respiration of the whole river system. Contrary to conventional wisdom, we found that water column respiration did not increase strongly when moving from small streams to big rivers. Instead, it was locally influenced by temperature, nutrients, and suspended solids.
Mark Chatting, Markus Diesing, William Ross Hunter, Anthony Grey, Brian P. Kelleher, and Mark Coughlan
Biogeosciences, 22, 5975–5990, https://doi.org/10.5194/bg-22-5975-2025, https://doi.org/10.5194/bg-22-5975-2025, 2025
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Marine sediments store carbon and are critical in the global carbon cycle, but data gaps reduce the accuracy of carbon stock estimates. This study improves estimates in the Irish Sea by refining key data inputs. Using machine learning and bias adjustments, the new model suggests previous estimates overestimated carbon stocks by 31.4 %. The findings highlight the need for more accurate sediment measurements to guide environmental policies and better protect carbon storage in marine ecosystems.
Jérémy Mayen, Pierre Polsenaere, Aurore Regaudie de Gioux, Jonathan Deborde, Karine Collin, Yoann Le Merrer, Élodie Foucault, Vincent Ouisse, Laurent André, Marie Arnaud, Pierre Kostyrka, Éric Lamaud, Gwenaël Abril, and Philippe Souchu
Biogeosciences, 22, 5387–5411, https://doi.org/10.5194/bg-22-5387-2025, https://doi.org/10.5194/bg-22-5387-2025, 2025
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In a salt marsh, we performed seasonal 24 h cycles to look for aquatic metabolism influence on water carbon dynamics and net ecosystem CO2 exchanges (NEEs). From high to low tide in winter, marsh anaerobic respiration generated the highest levels of dissolved inorganic carbon and alkalinity. On the contrary, in spring and summer, marsh primary production led to CO2-depleted water exports downstream. At high tide, aquatic heterotrophy can influence NEE during the highest immersion levels only.
Luis P. Valencia, Ángel Rodríguez-Santana, Borja Aguiar-González, Javier Arístegui, Xosé A. Álvarez-Salgado, Josep Coca, María D. Gelado-Caballero, and Antonio Martínez-Marrero
Ocean Sci., 21, 2305–2344, https://doi.org/10.5194/os-21-2305-2025, https://doi.org/10.5194/os-21-2305-2025, 2025
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We studied a rotating body of water south of the Canary Islands, known as an intrathermocline eddy. With an isolated core below the surface, it showed distinct energy patterns and structure. Satellite images and field data suggest it interacted with productive coastal waters, while its year-long life cycle unfolded surrounded by other vortices. These features point to a role in offshore transport and regional circulation, emphasizing the need for sustained, integrated ocean monitoring.
An Truong Nguyen, Gwenaël Abril, Jacob S. Diamond, Raphaël Lamouroux, Cécile Martinet, and Florentina Moatar
Biogeosciences, 22, 4923–4951, https://doi.org/10.5194/bg-22-4923-2025, https://doi.org/10.5194/bg-22-4923-2025, 2025
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To understand the role of rivers in the global carbon cycle, this 32-year study tracked carbon dioxide in France's Loire River. We found emissions decreased over the long term, despite varying more than tenfold from year to year. While the river ecosystem shifted from algae to plant dominance, this decrease in emissions was primarily driven by reduced groundwater inputs. This shows that catchment-scale hydrology can be more important than in-river biology for a river's carbon footprint.
Morgan E. Barnes, J. Alan Roebuck Jr., Samantha Grieger, Paul J. Aronstein, Vanessa A. Garayburu-Caruso, Kathleen Munson, Robert P. Young, Kevin D. Bladon, John D. Bailey, Emily B. Graham, Lupita Renteria, Peggy A. O'Day, Timothy D. Scheibe, and Allison N. Myers-Pigg
Biogeosciences, 22, 4491–4505, https://doi.org/10.5194/bg-22-4491-2025, https://doi.org/10.5194/bg-22-4491-2025, 2025
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Wildfires impact nutrient cycles on land and in water. We used burning experiments to understand the types of phosphorous (P), an essential nutrient, that might be released to the environment after different types of fires. We found the amount of P moving through the environment post-fire is dependent on the type of vegetation and degree of burning, which may influence when and where this material is processed or stored.
Junhyeong Seo, Heejun Han, Intae Kim, and Guebuem Kim
Biogeosciences, 22, 4423–4431, https://doi.org/10.5194/bg-22-4423-2025, https://doi.org/10.5194/bg-22-4423-2025, 2025
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This study examines methodological uncertainties in FDOM (fluorescent dissolved organic matter) measurements due to filter blanks, pore sizes, and storage conditions. Results show that pre-cleaning filters and optimizing storage improve measurement reliability. These findings minimize procedural errors and provide clear guidelines for FDOM analysis, emphasizing the need for method standardization in marine biogeochemical research.
Thomas Bauduin, Nathalie Gypens, and Alberto V. Borges
Biogeosciences, 22, 3785–3805, https://doi.org/10.5194/bg-22-3785-2025, https://doi.org/10.5194/bg-22-3785-2025, 2025
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To investigate if greenhouse gases (GHG) emissions from ponds vary among clear-water ponds with macrophytes and turbid-water ponds with phytoplankton, we measured CO2, CH4, and N2O concentrations and emissions in two clear- and two turbid-water urban ponds in the city of Brussels from June 2021 to December 2023. Differences in CH4 ebullitive emissions were observed between clear- and turbid-water ponds but none for CO2 and N2O emissions.
Manuel Bensi, Giuseppe Civitarese, Diego Borme, Carmela Caroppo, Gabriella Caruso, Federica Cerino, Franco Decembrini, Alessandra de Olazabal, Tommaso Diociaiuti, Michele Giani, Vedrana Kovacevic, Martina Kralj, Angelina Lo Giudice, Giovanna Maimone, Marina Monti, Maria Papale, Luisa Patrolecco, Elisa Putelli, Alessandro Ciro Rappazzo, Federica Relitti, Carmen Rizzo, Francesca Spataro, Valentina Tirelli, Clara Turetta, and Maurizio Azzaro
Earth Syst. Sci. Data, 17, 3701–3719, https://doi.org/10.5194/essd-17-3701-2025, https://doi.org/10.5194/essd-17-3701-2025, 2025
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In September 2021, the Italian Arctic Research Programme funded a multidisciplinary study along 75° N in the Greenland Sea as part of the CASSANDRA project and the Synoptic Arctic Survey (SAS) programme. This study emphasises the spatial variability of water properties, nutrient distribution, and biological communities determined by oceanographic dynamics in a region influenced by sea ice melting, Atlantic Water inflow, and climatic teleconnections during a record low summer sea ice extent.
Detong Tian, Xuegang Li, Jinming Song, Jun Ma, Huamao Yuan, and Liqin Duan
Ocean Sci., 21, 1627–1639, https://doi.org/10.5194/os-21-1627-2025, https://doi.org/10.5194/os-21-1627-2025, 2025
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Particulate organic carbon plays a vital role in the ocean's carbon cycle, yet its transformation involves complex processes that are not fully understood. This study examines the vertical distribution of stable carbon isotopes in the Tropical Northwestern Pacific, identifying three distinct biogeochemical layers of POC transformation, and contributes to a deeper understanding of the ocean's carbon cycle.
Zita Kelemen, David P. Gillikin, and Steven Bouillon
Biogeosciences, 22, 2621–2635, https://doi.org/10.5194/bg-22-2621-2025, https://doi.org/10.5194/bg-22-2621-2025, 2025
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We analysed the C and O stable isotope composition (δ13C, δ18O) across the growth axis of museum-archived and recent Chambardia wissmanni shells from the Oubangui River (Congo basin) covering sections of the past ~120 years. Recent shells showed a much wider range of δ18O values compared to historical specimens, consistent with the suggestion that dry periods in the upper Congo basin have become more extreme in recent times and highlighting the potential of this species to reconstruct hydroclimatic conditions.
Vao Fenotiana Razanamahandry, Alberto Vieira Borges, Liesa Brosens, Cedric Morana, Tantely Razafimbelo, Tovonarivo Rafolisy, Gerard Govers, and Steven Bouillon
Biogeosciences, 22, 2403–2424, https://doi.org/10.5194/bg-22-2403-2025, https://doi.org/10.5194/bg-22-2403-2025, 2025
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A comprehensive survey of the biogeochemistry of the Lake Alaotra system showed that the lake and surrounding wetlands acted as a substantial source of new organic carbon (OC), which was exported downstream. Marsh vegetation was the main source of dissolved OC, while phytoplankton contributed to the particulate OC pool. The biogeochemical functioning of Lake Alaotra differs from most East African lakes studied, likely due to its large surface area, shallow water depth, and surrounding wetlands.
Marielle Saunois, Adrien Martinez, Benjamin Poulter, Zhen Zhang, Peter A. Raymond, Pierre Regnier, Josep G. Canadell, Robert B. Jackson, Prabir K. Patra, Philippe Bousquet, Philippe Ciais, Edward J. Dlugokencky, Xin Lan, George H. Allen, David Bastviken, David J. Beerling, Dmitry A. Belikov, Donald R. Blake, Simona Castaldi, Monica Crippa, Bridget R. Deemer, Fraser Dennison, Giuseppe Etiope, Nicola Gedney, Lena Höglund-Isaksson, Meredith A. Holgerson, Peter O. Hopcroft, Gustaf Hugelius, Akihiko Ito, Atul K. Jain, Rajesh Janardanan, Matthew S. Johnson, Thomas Kleinen, Paul B. Krummel, Ronny Lauerwald, Tingting Li, Xiangyu Liu, Kyle C. McDonald, Joe R. Melton, Jens Mühle, Jurek Müller, Fabiola Murguia-Flores, Yosuke Niwa, Sergio Noce, Shufen Pan, Robert J. Parker, Changhui Peng, Michel Ramonet, William J. Riley, Gerard Rocher-Ros, Judith A. Rosentreter, Motoki Sasakawa, Arjo Segers, Steven J. Smith, Emily H. Stanley, Joël Thanwerdas, Hanqin Tian, Aki Tsuruta, Francesco N. Tubiello, Thomas S. Weber, Guido R. van der Werf, Douglas E. J. Worthy, Yi Xi, Yukio Yoshida, Wenxin Zhang, Bo Zheng, Qing Zhu, Qiuan Zhu, and Qianlai Zhuang
Earth Syst. Sci. Data, 17, 1873–1958, https://doi.org/10.5194/essd-17-1873-2025, https://doi.org/10.5194/essd-17-1873-2025, 2025
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Methane (CH4) is the second most important human-influenced greenhouse gas in terms of climate forcing after carbon dioxide (CO2). A consortium of multi-disciplinary scientists synthesise and update the budget of the sources and sinks of CH4. This edition benefits from important progress in estimating emissions from lakes and ponds, reservoirs, and streams and rivers. For the 2010s decade, global CH4 emissions are estimated at 575 Tg CH4 yr-1, including ~65 % from anthropogenic sources.
Librada Ramírez, Leonardo J. Pozzo-Pirotta, Aja Trebec, Víctor Manzanares-Vázquez, José L. Díez, Javier Arístegui, Ulf Riebesell, Stephen D. Archer, and María Segovia
Biogeosciences, 22, 1865–1886, https://doi.org/10.5194/bg-22-1865-2025, https://doi.org/10.5194/bg-22-1865-2025, 2025
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We studied the potential effects of increasing ocean alkalinity on a natural plankton community in subtropical waters of the Atlantic near Gran Canaria, Spain. Alkalinity is the capacity of water to resist acidification, and plankton are usually microscopic plants (phytoplankton) and animals (zooplankton), often less than 2.5 cm in length. This study suggests that increasing ocean alkalinity did not have a significant negative impact on the plankton community studied.
Kristin Jones, Lenaïg G. Hemery, Nicholas D. Ward, Peter J. Regier, Mallory C. Ringham, and Matthew D. Eisaman
Biogeosciences, 22, 1615–1630, https://doi.org/10.5194/bg-22-1615-2025, https://doi.org/10.5194/bg-22-1615-2025, 2025
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Ocean alkalinity enhancement is a marine carbon dioxide removal method that aims to mitigate the effects of climate change. This method causes localized increases in ocean pH, but the biological impacts of such changes are not well known. Our study investigated the response of two nearshore invertebrate species to increased pH and found the sea hare to be sensitive to pH changes, whereas the isopod was more resilient. Understanding interactions with biology is important as this field expands.
Naoya Kanna, Kazutaka Tateyama, Takuji Waseda, Anna Timofeeva, Maria Papadimitraki, Laura Whitmore, Hajime Obata, Daiki Nomura, Hiroshi Ogawa, Youhei Yamashita, and Igor Polyakov
Biogeosciences, 22, 1057–1076, https://doi.org/10.5194/bg-22-1057-2025, https://doi.org/10.5194/bg-22-1057-2025, 2025
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This article presents data on iron and manganese, essential micronutrients for primary producers in the Arctic Laptev and East Siberian seas (LESS). There, observations were made through international cooperation with the Nansen and Amundsen Basin Observational System expedition during the late summer of 2021. The results from this study indicate that the major sources controlling the iron and manganese distributions on the LESS continental margins are river discharge and shelf sediment input.
Guorong Zhong, Xuegang Li, Jinming Song, Baoxiao Qu, Fan Wang, Yanjun Wang, Bin Zhang, Lijing Cheng, Jun Ma, Huamao Yuan, Liqin Duan, Ning Li, Qidong Wang, Jianwei Xing, and Jiajia Dai
Earth Syst. Sci. Data, 17, 719–740, https://doi.org/10.5194/essd-17-719-2025, https://doi.org/10.5194/essd-17-719-2025, 2025
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The continuous uptake of atmospheric CO2 by the ocean leads to decreasing seawater pH, which is an ongoing threat to the marine ecosystem. This pH change has been globally documented in the surface ocean, but information is limited below the surface. Here, we present a monthly 1° gridded product of global seawater pH based on a machine learning method and real pH observations. The pH product covers the years from 1992 to 2020 and depths from 0 to 2000 m.
Maria G. Digernes, Yasemin V. Bodur, Martí Amargant-Arumí, Oliver Müller, Jeffrey A. Hawkes, Stephen G. Kohler, Ulrike Dietrich, Marit Reigstad, and Maria L. Paulsen
Biogeosciences, 22, 601–623, https://doi.org/10.5194/bg-22-601-2025, https://doi.org/10.5194/bg-22-601-2025, 2025
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Dissolved (DOM) and particulate organic matter (POM) are in constant exchange but are usually studied as distinct entities. We investigated the dynamics between POM and DOM in a sub-Arctic fjord across different seasons by conducting bi-monthly aggregation–dissolution experiments. During the productive period, POM concentrations increased in the experiment, and DOM molecules became more recalcitrant. During the winter period, POM concentrations decreased, and DOM molecules became more labile.
Jessica Breavington, Alexandra Steckbauer, Chuancheng Fu, Mongi Ennasri, and Carlos M. Duarte
Biogeosciences, 22, 117–134, https://doi.org/10.5194/bg-22-117-2025, https://doi.org/10.5194/bg-22-117-2025, 2025
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Mangrove carbon storage in the Red Sea is lower than average due to challenging growth conditions. We collected mangrove soil cores over multiple seasons to measure greenhouse gas (GHG) flux of carbon dioxide and methane. GHG emissions are a small offset to mangrove carbon storage overall but punctuated by periods of high emission. This variation is linked to environmental and soil properties, which were also measured. The findings aid understanding of GHG dynamics in arid mangrove ecosystems.
Bennet Juhls, Anne Morgenstern, Jens Hölemann, Antje Eulenburg, Birgit Heim, Frederieke Miesner, Hendrik Grotheer, Gesine Mollenhauer, Hanno Meyer, Ephraim Erkens, Felica Yara Gehde, Sofia Antonova, Sergey Chalov, Maria Tereshina, Oxana Erina, Evgeniya Fingert, Ekaterina Abramova, Tina Sanders, Liudmila Lebedeva, Nikolai Torgovkin, Georgii Maksimov, Vasily Povazhnyi, Rafael Gonçalves-Araujo, Urban Wünsch, Antonina Chetverova, Sophie Opfergelt, and Pier Paul Overduin
Earth Syst. Sci. Data, 17, 1–28, https://doi.org/10.5194/essd-17-1-2025, https://doi.org/10.5194/essd-17-1-2025, 2025
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The Siberian Arctic is warming fast: permafrost is thawing, river chemistry is changing, and coastal ecosystems are affected. We aimed to understand changes in the Lena River, a major Arctic river flowing to the Arctic Ocean, by collecting 4.5 years of detailed water data, including temperature and carbon and nutrient contents. This dataset records current conditions and helps us to detect future changes. Explore it at https://doi.org/10.1594/PANGAEA.913197 and https://lena-monitoring.awi.de/.
Laura Marín-Samper, Javier Arístegui, Nauzet Hernández-Hernández, and Ulf Riebesell
Biogeosciences, 21, 5707–5724, https://doi.org/10.5194/bg-21-5707-2024, https://doi.org/10.5194/bg-21-5707-2024, 2024
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This study exposed a natural community to two non-CO2-equilibrated ocean alkalinity enhancement (OAE) deployments using different minerals. Adding alkalinity in this manner decreases dissolved CO2, essential for photosynthesis. While photosynthesis was not suppressed, bloom formation was mildly delayed, potentially impacting marine food webs. The study emphasizes the need for further research on OAE without prior equilibration and on its ecological implications.
Katherine A. Muller, Peishi Jiang, Glenn Hammond, Tasneem Ahmadullah, Hyun-Seob Song, Ravi Kukkadapu, Nicholas Ward, Madison Bowe, Rosalie K. Chu, Qian Zhao, Vanessa A. Garayburu-Caruso, Alan Roebuck, and Xingyuan Chen
Geosci. Model Dev., 17, 8955–8968, https://doi.org/10.5194/gmd-17-8955-2024, https://doi.org/10.5194/gmd-17-8955-2024, 2024
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The new Lambda-PFLOTRAN workflow incorporates organic matter chemistry into reaction networks to simulate aerobic respiration and biogeochemistry. Lambda-PFLOTRAN is a Python-based workflow in a Jupyter notebook interface that digests raw organic matter chemistry data via Fourier transform ion cyclotron resonance mass spectrometry, develops a representative reaction network, and completes a biogeochemical simulation with the open-source, parallel-reactive-flow, and transport code PFLOTRAN.
Riccardo Martellucci, Michele Giani, Elena Mauri, Laurent Coppola, Melf Paulsen, Marine Fourrier, Sara Pensieri, Vanessa Cardin, Carlotta Dentico, Roberto Bozzano, Carolina Cantoni, Anna Lucchetta, Alfredo Izquierdo, Miguel Bruno, and Ingunn Skjelvan
Earth Syst. Sci. Data, 16, 5333–5356, https://doi.org/10.5194/essd-16-5333-2024, https://doi.org/10.5194/essd-16-5333-2024, 2024
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As part of the ATL2MED demonstration experiment, two autonomous surface vehicles undertook a 9-month mission from the northeastern Atlantic to the Adriatic Sea. Biofouling affected the measurement of variables such as conductivity and dissolved oxygen. COVID-19 limited the availability of discrete samples for validation. We present correction methods for salinity and dissolved oxygen. We use model products to correct salinity and apply the Argo floats in-air correction method for oxygen
Chiara Santinelli, Silvia Valsecchi, Simona Retelletti Brogi, Giancarlo Bachi, Giovanni Checcucci, Mirco Guerrazzi, Elisa Camatti, Stefano Caserini, Arianna Azzellino, and Daniela Basso
Biogeosciences, 21, 5131–5141, https://doi.org/10.5194/bg-21-5131-2024, https://doi.org/10.5194/bg-21-5131-2024, 2024
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Ocean liming is a technique proposed to mitigate ocean acidification. Every action we take has an impact on the environment and the effects on the invisible world are often overlooked. With this study, we show that lime addition impacts the dynamics of dissolved organic matter, one of the largest reservoirs of carbon on Earth, representing the main source of energy for marine microbes. Further studies to assess the impacts on marine ecosystems are therefore crucial before taking any action.
Justin A. Nghiem, Gen K. Li, Joshua P. Harringmeyer, Gerard Salter, Cédric G. Fichot, Luca Cortese, and Michael P. Lamb
Earth Surf. Dynam., 12, 1267–1294, https://doi.org/10.5194/esurf-12-1267-2024, https://doi.org/10.5194/esurf-12-1267-2024, 2024
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Fine sediment grains in freshwater can cohere into faster-settling particles called flocs, but floc settling velocity theory has not been fully validated. Combining three data sources in novel ways in the Wax Lake Delta, we verified a semi-empirical model relying on turbulence and geochemical factors. For a physics-based model, we showed that the representative grain diameter within flocs relies on floc structure and that heterogeneous flow paths inside flocs increase floc settling velocity.
William Kew, Allison Myers-Pigg, Christine H. Chang, Sean M. Colby, Josie Eder, Malak M. Tfaily, Jeffrey Hawkes, Rosalie K. Chu, and James C. Stegen
Biogeosciences, 21, 4665–4679, https://doi.org/10.5194/bg-21-4665-2024, https://doi.org/10.5194/bg-21-4665-2024, 2024
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Natural organic matter (NOM) is often studied via Fourier transform mass spectrometry (FTMS), which identifies organic molecules as mass spectra peaks. The intensity of peaks is data that is often discarded due to technical concerns. We review the theory behind these concerns and show they are supported empirically. However, simulations show that ecological analyses of NOM data that include FTMS peak intensities are often valid. This opens a path for robust use of FTMS peak intensities for NOM.
Esdoorn Willcox, Marcos Lemes, Thomas Juul-Pedersen, Mikael Kristian Sejr, Johnna Marchiano Holding, and Søren Rysgaard
Biogeosciences, 21, 4037–4050, https://doi.org/10.5194/bg-21-4037-2024, https://doi.org/10.5194/bg-21-4037-2024, 2024
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In this work, we measured the chemistry of seawater from samples obtained from different depths and locations off the east coast of the Northeast Greenland National Park to determine what is influencing concentrations of dissolved CO2. Historically, the region has always been thought to take up CO2 from the atmosphere, but we show that it is possible for the region to become a source in late summer. We discuss the variables that may be related to such changes.
Katie A. Wampler, Kevin D. Bladon, and Allison N. Myers-Pigg
Biogeosciences, 21, 3093–3120, https://doi.org/10.5194/bg-21-3093-2024, https://doi.org/10.5194/bg-21-3093-2024, 2024
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Following a high-severity wildfire, we sampled 129 sites during four different times of the year across a stream network to quantify dissolved organic carbon. The results from our study suggested that dissolved organic carbon may decrease with increasing burn severity. They also suggest that landscape characteristics can override wildfire impacts, with the seasonal timing of sampling influencing the observed response of dissolved organic carbon concentrations to wildfire.
Amanda Y. L. Cheong, Kogila Vani Annammala, Ee Ling Yong, Yongli Zhou, Robert S. Nichols, and Patrick Martin
Biogeosciences, 21, 2955–2971, https://doi.org/10.5194/bg-21-2955-2024, https://doi.org/10.5194/bg-21-2955-2024, 2024
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We measured nutrients and dissolved organic matter for 1 year in a eutrophic tropical estuary to understand their sources and cycling. Our data show that the dissolved organic matter originates partly from land and partly from microbial processes in the water. Internal recycling is likely important for maintaining high nutrient concentrations, and we found that there is often excess nitrogen compared to silicon and phosphorus. Our data help to explain how eutrophication persists in this system.
Laura Marín-Samper, Javier Arístegui, Nauzet Hernández-Hernández, Joaquín Ortiz, Stephen D. Archer, Andrea Ludwig, and Ulf Riebesell
Biogeosciences, 21, 2859–2876, https://doi.org/10.5194/bg-21-2859-2024, https://doi.org/10.5194/bg-21-2859-2024, 2024
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Our planet is facing a climate crisis. Scientists are working on innovative solutions that will aid in capturing the hard to abate emissions before it is too late. Exciting research reveals that ocean alkalinity enhancement, a key climate change mitigation strategy, does not harm phytoplankton, the cornerstone of marine ecosystems. Through meticulous study, we may have uncovered a positive relationship: up to a specific limit, enhancing ocean alkalinity boosts photosynthesis by certain species.
Hanqin Tian, Naiqing Pan, Rona L. Thompson, Josep G. Canadell, Parvadha Suntharalingam, Pierre Regnier, Eric A. Davidson, Michael Prather, Philippe Ciais, Marilena Muntean, Shufen Pan, Wilfried Winiwarter, Sönke Zaehle, Feng Zhou, Robert B. Jackson, Hermann W. Bange, Sarah Berthet, Zihao Bian, Daniele Bianchi, Alexander F. Bouwman, Erik T. Buitenhuis, Geoffrey Dutton, Minpeng Hu, Akihiko Ito, Atul K. Jain, Aurich Jeltsch-Thömmes, Fortunat Joos, Sian Kou-Giesbrecht, Paul B. Krummel, Xin Lan, Angela Landolfi, Ronny Lauerwald, Ya Li, Chaoqun Lu, Taylor Maavara, Manfredi Manizza, Dylan B. Millet, Jens Mühle, Prabir K. Patra, Glen P. Peters, Xiaoyu Qin, Peter Raymond, Laure Resplandy, Judith A. Rosentreter, Hao Shi, Qing Sun, Daniele Tonina, Francesco N. Tubiello, Guido R. van der Werf, Nicolas Vuichard, Junjie Wang, Kelley C. Wells, Luke M. Western, Chris Wilson, Jia Yang, Yuanzhi Yao, Yongfa You, and Qing Zhu
Earth Syst. Sci. Data, 16, 2543–2604, https://doi.org/10.5194/essd-16-2543-2024, https://doi.org/10.5194/essd-16-2543-2024, 2024
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Atmospheric concentrations of nitrous oxide (N2O), a greenhouse gas 273 times more potent than carbon dioxide, have increased by 25 % since the preindustrial period, with the highest observed growth rate in 2020 and 2021. This rapid growth rate has primarily been due to a 40 % increase in anthropogenic emissions since 1980. Observed atmospheric N2O concentrations in recent years have exceeded the worst-case climate scenario, underscoring the importance of reducing anthropogenic N2O emissions.
Nico Lange, Björn Fiedler, Marta Álvarez, Alice Benoit-Cattin, Heather Benway, Pier Luigi Buttigieg, Laurent Coppola, Kim Currie, Susana Flecha, Dana S. Gerlach, Makio Honda, I. Emma Huertas, Siv K. Lauvset, Frank Muller-Karger, Arne Körtzinger, Kevin M. O'Brien, Sólveig R. Ólafsdóttir, Fernando C. Pacheco, Digna Rueda-Roa, Ingunn Skjelvan, Masahide Wakita, Angelicque White, and Toste Tanhua
Earth Syst. Sci. Data, 16, 1901–1931, https://doi.org/10.5194/essd-16-1901-2024, https://doi.org/10.5194/essd-16-1901-2024, 2024
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The Synthesis Product for Ocean Time Series (SPOTS) is a novel achievement expanding and complementing the biogeochemical data landscape by providing consistent and high-quality biogeochemical time-series data from 12 ship-based fixed time-series programs. SPOTS covers multiple unique marine environments and time-series ranges, including data from 1983 to 2021. All in all, it facilitates a variety of applications that benefit from the collective value of biogeochemical time-series observations.
Luca Cortese, Carmine Donatelli, Xiaohe Zhang, Justin A. Nghiem, Marc Simard, Cathleen E. Jones, Michael Denbina, Cédric G. Fichot, Joshua P. Harringmeyer, and Sergio Fagherazzi
Biogeosciences, 21, 241–260, https://doi.org/10.5194/bg-21-241-2024, https://doi.org/10.5194/bg-21-241-2024, 2024
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This study shows that numerical models in coastal areas can greatly benefit from the spatial information provided by remote sensing. Three Delft3D numerical models in coastal Louisiana are calibrated using airborne SAR and hyperspectral remote sensing products from the recent NASA Delta-X mission. The comparison with the remote sensing allows areas where the models perform better to be spatially verified and yields more representative parameters for the entire area.
Tsuneo Ono, Daisuke Muraoka, Masahiro Hayashi, Makiko Yorifuji, Akihiro Dazai, Shigeyuki Omoto, Takehiro Tanaka, Tomohiro Okamura, Goh Onitsuka, Kenji Sudo, Masahiko Fujii, Ryuji Hamanoue, and Masahide Wakita
Biogeosciences, 21, 177–199, https://doi.org/10.5194/bg-21-177-2024, https://doi.org/10.5194/bg-21-177-2024, 2024
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We carried out parallel year-round observations of pH and related parameters in five stations around the Japan coast. It was found that short-term acidified situations with Omega_ar less than 1.5 occurred at four of five stations. Most of such short-term acidified events were related to the short-term low salinity event, and the extent of short-term pH drawdown at high freshwater input was positively correlated with the nutrient concentration of the main rivers that flow into the coastal area.
Stephanie G. Fulton, Morgan Barnes, Mikayla A. Borton, Xingyuan Chen, Yuliya Farris, Brieanne Forbes, Vanessa A. Garayburu-Caruso, Amy E. Goldman, Samantha Grieger, Robert Hall Jr., Matthew H. Kaufman, Xinming Lin, Erin McCann, Sophia A. McKever, Allison Myers-Pigg, Opal C. Otenburg, Aaron C. Pelly, Huiying Ren, Lupita Renteria, Timothy D. Scheibe, Kyongho Son, Jerry Tagestad, Joshua M. Torgeson, and James C. Stegen
EGUsphere, https://doi.org/10.5194/egusphere-2023-3038, https://doi.org/10.5194/egusphere-2023-3038, 2024
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This research examines oxygen use in rivers, which is central to the carbon cycle and water quality. The study focused on an environmentally diverse river basin in the western United States and found that oxygen use in river water was very slow and influenced by factors like water temperature and concentrations of nutrients and carbon in the water. Results suggest that in the study system, most of the oxygen use occurs via mechanisms directly or indirectly associated with riverbed sediments.
Masahiko Fujii, Ryuji Hamanoue, Lawrence Patrick Cases Bernardo, Tsuneo Ono, Akihiro Dazai, Shigeyuki Oomoto, Masahide Wakita, and Takehiro Tanaka
Biogeosciences, 20, 4527–4549, https://doi.org/10.5194/bg-20-4527-2023, https://doi.org/10.5194/bg-20-4527-2023, 2023
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This is the first study of the current and future impacts of climate change on Pacific oyster farming in Japan. Future coastal warming and acidification may affect oyster larvae as a result of longer exposure to lower-pH waters. A prolonged spawning period may harm oyster processing by shortening the shipping period and reducing oyster quality. To minimize impacts on Pacific oyster farming, in addition to mitigation measures, local adaptation measures may be required.
Aleksandra Cherkasheva, Rustam Manurov, Piotr Kowalczuk, Alexandra N. Loginova, Monika Zabłocka, and Astrid Bracher
EGUsphere, https://doi.org/10.5194/egusphere-2023-2495, https://doi.org/10.5194/egusphere-2023-2495, 2023
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We aimed to improve the quality of regional Greenland Sea primary production estimates. Seventy two versions of primary production model setups were tested against field data. Best performing models had local biomass and light absorption profiles. Thus by using local parametrizations for these parameters we can improve Arctic primary production model performance. Annual Greenland Sea basin estimates are larger than previously reported.
Afrah Alothman, Daffne López-Sandoval, Carlos M. Duarte, and Susana Agustí
Biogeosciences, 20, 3613–3624, https://doi.org/10.5194/bg-20-3613-2023, https://doi.org/10.5194/bg-20-3613-2023, 2023
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This study investigates bacterial dissolved inorganic carbon (DIC) fixation in the Red Sea, an oligotrophic ecosystem, using stable-isotope labeling and spectroscopy. The research reveals that bacterial DIC fixation significantly contributes to total DIC fixation, in the surface and deep water. The study demonstrates that as primary production decreases, the role of bacterial DIC fixation increases, emphasizing its importance with photosynthesis in estimating oceanic carbon dioxide production.
Emily B. Graham, Hyun-Seob Song, Samantha Grieger, Vanessa A. Garayburu-Caruso, James C. Stegen, Kevin D. Bladon, and Allison N. Myers-Pigg
Biogeosciences, 20, 3449–3457, https://doi.org/10.5194/bg-20-3449-2023, https://doi.org/10.5194/bg-20-3449-2023, 2023
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Intensifying wildfires are increasing pyrogenic organic matter (PyOM) production and its impact on water quality. Recent work indicates that PyOM may have a greater impact on aquatic biogeochemistry than previously assumed, driven by higher bioavailability. We provide a full assessment of the potential bioavailability of PyOM across its chemical spectrum. We indicate that PyOM can be actively transformed within the river corridor and, therefore, may be a growing source of riverine C emissions.
Bronwyn E. Cahill, Piotr Kowalczuk, Lena Kritten, Ulf Gräwe, John Wilkin, and Jürgen Fischer
Biogeosciences, 20, 2743–2768, https://doi.org/10.5194/bg-20-2743-2023, https://doi.org/10.5194/bg-20-2743-2023, 2023
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We quantify the impact of optically significant water constituents on surface heating rates and thermal energy fluxes in the western Baltic Sea. During productive months in 2018 (April to September) we found that the combined effect of coloured
dissolved organic matter and particulate absorption contributes to sea surface heating of between 0.4 and 0.9 K m−1 d−1 and a mean loss of heat (ca. 5 W m−2) from the sea to the atmosphere. This may be important for regional heat balance budgets.
Kristian Spilling, Jonna Piiparinen, Eric P. Achterberg, Javier Arístegui, Lennart T. Bach, Maria T. Camarena-Gómez, Elisabeth von der Esch, Martin A. Fischer, Markel Gómez-Letona, Nauzet Hernández-Hernández, Judith Meyer, Ruth A. Schmitz, and Ulf Riebesell
Biogeosciences, 20, 1605–1619, https://doi.org/10.5194/bg-20-1605-2023, https://doi.org/10.5194/bg-20-1605-2023, 2023
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We carried out an enclosure experiment using surface water off Peru with different additions of oxygen minimum zone water. In this paper, we report on enzyme activity and provide data on the decomposition of organic matter. We found very high activity with respect to an enzyme breaking down protein, suggesting that this is important for nutrient recycling both at present and in the future ocean.
Jens Hartmann, Niels Suitner, Carl Lim, Julieta Schneider, Laura Marín-Samper, Javier Arístegui, Phil Renforth, Jan Taucher, and Ulf Riebesell
Biogeosciences, 20, 781–802, https://doi.org/10.5194/bg-20-781-2023, https://doi.org/10.5194/bg-20-781-2023, 2023
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CO2 can be stored in the ocean via increasing alkalinity of ocean water. Alkalinity can be created via dissolution of alkaline materials, like limestone or soda. Presented research studies boundaries for increasing alkalinity in seawater. The best way to increase alkalinity was found using an equilibrated solution, for example as produced from reactors. Adding particles for dissolution into seawater on the other hand produces the risk of losing alkalinity and degassing of CO2 to the atmosphere.
Simone Strydom, Roisin McCallum, Anna Lafratta, Chanelle L. Webster, Caitlyn M. O'Dea, Nicole E. Said, Natasha Dunham, Karina Inostroza, Cristian Salinas, Samuel Billinghurst, Charlie M. Phelps, Connor Campbell, Connor Gorham, Rachele Bernasconi, Anna M. Frouws, Axel Werner, Federico Vitelli, Viena Puigcorbé, Alexandra D'Cruz, Kathryn M. McMahon, Jack Robinson, Megan J. Huggett, Sian McNamara, Glenn A. Hyndes, and Oscar Serrano
Earth Syst. Sci. Data, 15, 511–519, https://doi.org/10.5194/essd-15-511-2023, https://doi.org/10.5194/essd-15-511-2023, 2023
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Seagrasses are important underwater plants that provide valuable ecosystem services to humans, including mitigating climate change. Understanding the natural history of seagrass meadows across different types of environments is crucial to conserving seagrasses in the global ocean. This dataset contains data extracted from peer-reviewed publications and highlights which seagrasses have been studied and in which locations and is useful for pointing out which need further investigation.
Tsukasa Dobashi, Yuzo Miyazaki, Eri Tachibana, Kazutaka Takahashi, Sachiko Horii, Fuminori Hashihama, Saori Yasui-Tamura, Yoko Iwamoto, Shu-Kuan Wong, and Koji Hamasaki
Biogeosciences, 20, 439–449, https://doi.org/10.5194/bg-20-439-2023, https://doi.org/10.5194/bg-20-439-2023, 2023
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Water-soluble organic nitrogen (WSON) in marine aerosols is important for biogeochemical cycling of bioelements. Our shipboard measurements suggested that reactive nitrogen produced and exuded by nitrogen-fixing microorganisms in surface seawater likely contributed to the formation of WSON aerosols in the subtropical North Pacific. This study provides new implications for the role of marine microbial activity in the formation of WSON aerosols in the ocean surface.
André Valente, Shubha Sathyendranath, Vanda Brotas, Steve Groom, Michael Grant, Thomas Jackson, Andrei Chuprin, Malcolm Taberner, Ruth Airs, David Antoine, Robert Arnone, William M. Balch, Kathryn Barker, Ray Barlow, Simon Bélanger, Jean-François Berthon, Şükrü Beşiktepe, Yngve Borsheim, Astrid Bracher, Vittorio Brando, Robert J. W. Brewin, Elisabetta Canuti, Francisco P. Chavez, Andrés Cianca, Hervé Claustre, Lesley Clementson, Richard Crout, Afonso Ferreira, Scott Freeman, Robert Frouin, Carlos García-Soto, Stuart W. Gibb, Ralf Goericke, Richard Gould, Nathalie Guillocheau, Stanford B. Hooker, Chuamin Hu, Mati Kahru, Milton Kampel, Holger Klein, Susanne Kratzer, Raphael Kudela, Jesus Ledesma, Steven Lohrenz, Hubert Loisel, Antonio Mannino, Victor Martinez-Vicente, Patricia Matrai, David McKee, Brian G. Mitchell, Tiffany Moisan, Enrique Montes, Frank Muller-Karger, Aimee Neeley, Michael Novak, Leonie O'Dowd, Michael Ondrusek, Trevor Platt, Alex J. Poulton, Michel Repecaud, Rüdiger Röttgers, Thomas Schroeder, Timothy Smyth, Denise Smythe-Wright, Heidi M. Sosik, Crystal Thomas, Rob Thomas, Gavin Tilstone, Andreia Tracana, Michael Twardowski, Vincenzo Vellucci, Kenneth Voss, Jeremy Werdell, Marcel Wernand, Bozena Wojtasiewicz, Simon Wright, and Giuseppe Zibordi
Earth Syst. Sci. Data, 14, 5737–5770, https://doi.org/10.5194/essd-14-5737-2022, https://doi.org/10.5194/essd-14-5737-2022, 2022
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A compiled set of in situ data is vital to evaluate the quality of ocean-colour satellite data records. Here we describe the global compilation of bio-optical in situ data (spanning from 1997 to 2021) used for the validation of the ocean-colour products from the ESA Ocean Colour Climate Change Initiative (OC-CCI). The compilation merges and harmonizes several in situ data sources into a simple format that could be used directly for the evaluation of satellite-derived ocean-colour data.
Allanah Joy Paul, Lennart Thomas Bach, Javier Arístegui, Elisabeth von der Esch, Nauzet Hernández-Hernández, Jonna Piiparinen, Laura Ramajo, Kristian Spilling, and Ulf Riebesell
Biogeosciences, 19, 5911–5926, https://doi.org/10.5194/bg-19-5911-2022, https://doi.org/10.5194/bg-19-5911-2022, 2022
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We investigated how different deep water chemistry and biology modulate the response of surface phytoplankton communities to upwelling in the Peruvian coastal zone. Our results show that the most influential drivers were the ratio of inorganic nutrients (N : P) and the microbial community present in upwelling source water. These led to unexpected and variable development in the phytoplankton assemblage that could not be predicted by the amount of inorganic nutrients alone.
Jenny Choo, Nagur Cherukuru, Eric Lehmann, Matt Paget, Aazani Mujahid, Patrick Martin, and Moritz Müller
Biogeosciences, 19, 5837–5857, https://doi.org/10.5194/bg-19-5837-2022, https://doi.org/10.5194/bg-19-5837-2022, 2022
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This study presents the first observation of water quality changes over space and time in the coastal systems of Sarawak, Malaysian Borneo, using remote sensing technologies. While our findings demonstrate that the southwestern coast of Sarawak is within local water quality standards, historical patterns of water quality degradation that were detected can help to alert local authorities and enhance management and monitoring strategies of coastal waters in this region.
Manab Kumar Dutta, Krishnan Sreelash, Damodaran Padmalal, Nicholas D. Ward, and Thomas S. Bianchi
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-200, https://doi.org/10.5194/bg-2022-200, 2022
Revised manuscript not accepted
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Indian estuaries contribute to 2.62 % and 1.09 % of global riverine DIC and DOC export to the ocean, respectively. Major Indian estuaries emit ~9718 Gg yr-1 and 3.27 Gg yr-1 of CO2 and CH4 to the atmosphere, respectively, which contributes ~0.67 % and ~0.12 % to global CO2 and CH4 outgassing from estuaries.
Vao Fenotiana Razanamahandry, Marjolein Dewaele, Gerard Govers, Liesa Brosens, Benjamin Campforts, Liesbet Jacobs, Tantely Razafimbelo, Tovonarivo Rafolisy, and Steven Bouillon
Biogeosciences, 19, 3825–3841, https://doi.org/10.5194/bg-19-3825-2022, https://doi.org/10.5194/bg-19-3825-2022, 2022
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In order to shed light on possible past vegetation shifts in the Central Highlands of Madagascar, we measured stable isotope ratios of organic carbon in soil profiles along both forested and grassland hillslope transects in the Lake Alaotra region. Our results show that the landscape of this region was more forested in the past: soils in the C4-dominated grasslands contained a substantial fraction of C3-derived carbon, increasing with depth.
Tristan Petit, Børge Hamre, Håkon Sandven, Rüdiger Röttgers, Piotr Kowalczuk, Monika Zablocka, and Mats A. Granskog
Ocean Sci., 18, 455–468, https://doi.org/10.5194/os-18-455-2022, https://doi.org/10.5194/os-18-455-2022, 2022
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We provide the first insights on bio-optical processes in Storfjorden (Svalbard). Information on factors controlling light propagation in the water column in this arctic fjord becomes crucial in times of rapid sea ice decline. We find a significant contribution of dissolved matter to light absorption and a subsurface absorption maximum linked to phytoplankton production. Dense bottom waters from sea ice formation carry elevated levels of dissolved and particulate matter.
Rey Harvey Suello, Simon Lucas Hernandez, Steven Bouillon, Jean-Philippe Belliard, Luis Dominguez-Granda, Marijn Van de Broek, Andrea Mishell Rosado Moncayo, John Ramos Veliz, Karem Pollette Ramirez, Gerard Govers, and Stijn Temmerman
Biogeosciences, 19, 1571–1585, https://doi.org/10.5194/bg-19-1571-2022, https://doi.org/10.5194/bg-19-1571-2022, 2022
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This research shows indications that the age of the mangrove forest and its position along a deltaic gradient (upstream–downstream) play a vital role in the amount and sources of carbon stored in the mangrove sediments. Our findings also imply that carbon capture by the mangrove ecosystem itself contributes partly but relatively little to long-term sediment organic carbon storage. This finding is particularly relevant for budgeting the potential of mangrove ecosystems to mitigate climate change.
Guorong Zhong, Xuegang Li, Jinming Song, Baoxiao Qu, Fan Wang, Yanjun Wang, Bin Zhang, Xiaoxia Sun, Wuchang Zhang, Zhenyan Wang, Jun Ma, Huamao Yuan, and Liqin Duan
Biogeosciences, 19, 845–859, https://doi.org/10.5194/bg-19-845-2022, https://doi.org/10.5194/bg-19-845-2022, 2022
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A predictor selection algorithm was constructed to decrease the predicting error in the surface ocean partial pressure of CO2 (pCO2) mapping by finding better combinations of pCO2 predictors in different regions. Compared with previous research using the same combination of predictors in all regions, using different predictors selected by the algorithm in different regions can effectively decrease pCO2 predicting errors.
Federica Maggioni, Mireille Pujo-Pay, Jérome Aucan, Carlo Cerrano, Barbara Calcinai, Claude Payri, Francesca Benzoni, Yves Letourneur, and Riccardo Rodolfo-Metalpa
Biogeosciences, 18, 5117–5140, https://doi.org/10.5194/bg-18-5117-2021, https://doi.org/10.5194/bg-18-5117-2021, 2021
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Based on current experimental evidence, climate change will affect up to 90 % of coral reefs worldwide. The originality of this study arises from our recent discovery of an exceptional study site where environmental conditions (temperature, pH, and oxygen) are even worse than those forecasted for the future.
While these conditions are generally recognized as unfavorable for marine life, we found a rich and abundant coral reef thriving under such extreme environmental conditions.
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PTCRIS: CICECO-Instituto de Materiais de Aveiro, Universidade de Aveiro, https://doi.org/10.54499/UIDB/50011/2020, 2020–2023.
PTCRIS: GraphChem – Providing solutions for clean water production and recycling of technological critical elements: from ‘the wonder material’ to chemobrionics systems, Universidade de Aveiro, https://doi.org/10.54499/2021.03739.CEECIND/CP1659/CT0025, 2022–2024a.
PTCRIS: CICECO – Instituto de Materiais de Aveiro, Universidade de Aveiro, https://doi.org/10.54499/LA/P/0006/2020, 2022–2024b.
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Short summary
In this paper, we present the first edition of a global database compiling previously published and unpublished measurements of dissolved organic matter (DOM) collected in coastal waters (CoastDOM v1). Overall, the CoastDOM v1 dataset will be useful to identify global spatial and temporal patterns and to facilitate reuse in studies aimed at better characterizing local biogeochemical processes and identifying a baseline for modelling future changes in coastal waters.
In this paper, we present the first edition of a global database compiling previously published...
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