Data description paper
16 Oct 2020
Data description paper
| 16 Oct 2020
Apparent ecosystem carbon turnover time: uncertainties and robust features
Naixin Fan et al.
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Tina Trautmann, Sujan Koirala, Nuno Carvalhais, Andreas Güntner, and Martin Jung
Hydrol. Earth Syst. Sci., 26, 1089–1109, https://doi.org/10.5194/hess-26-1089-2022, https://doi.org/10.5194/hess-26-1089-2022, 2022
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Yeonuk Kim, Monica Garcia, Laura Morillas, Ulrich Weber, T. Andrew Black, and Mark S. Johnson
Hydrol. Earth Syst. Sci., 25, 5175–5191, https://doi.org/10.5194/hess-25-5175-2021, https://doi.org/10.5194/hess-25-5175-2021, 2021
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Earth Syst. Sci. Data, 13, 4263–4274, https://doi.org/10.5194/essd-13-4263-2021, https://doi.org/10.5194/essd-13-4263-2021, 2021
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Maurizio Santoro, Oliver Cartus, Nuno Carvalhais, Danaë M. A. Rozendaal, Valerio Avitabile, Arnan Araza, Sytze de Bruin, Martin Herold, Shaun Quegan, Pedro Rodríguez-Veiga, Heiko Balzter, João Carreiras, Dmitry Schepaschenko, Mikhail Korets, Masanobu Shimada, Takuya Itoh, Álvaro Moreno Martínez, Jura Cavlovic, Roberto Cazzolla Gatti, Polyanna da Conceição Bispo, Nasheta Dewnath, Nicolas Labrière, Jingjing Liang, Jeremy Lindsell, Edward T. A. Mitchard, Alexandra Morel, Ana Maria Pacheco Pascagaza, Casey M. Ryan, Ferry Slik, Gaia Vaglio Laurin, Hans Verbeeck, Arief Wijaya, and Simon Willcock
Earth Syst. Sci. Data, 13, 3927–3950, https://doi.org/10.5194/essd-13-3927-2021, https://doi.org/10.5194/essd-13-3927-2021, 2021
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Forests play a crucial role in Earth’s carbon cycle. To understand the carbon cycle better, we generated a global dataset of forest above-ground biomass, i.e. carbon stocks, from satellite data of 2010. This dataset provides a comprehensive and detailed portrait of the distribution of carbon in forests, although for dense forests in the tropics values are somewhat underestimated. This dataset will have a considerable impact on climate, carbon, and socio-economic modelling schemes.
Christopher Krich, Mirco Migliavacca, Diego G. Miralles, Guido Kraemer, Tarek S. El-Madany, Markus Reichstein, Jakob Runge, and Miguel D. Mahecha
Biogeosciences, 18, 2379–2404, https://doi.org/10.5194/bg-18-2379-2021, https://doi.org/10.5194/bg-18-2379-2021, 2021
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Ecosystems and the atmosphere interact with each other. These interactions determine e.g. the water and carbon fluxes and thus are crucial to understand climate change effects. We analysed the interactions for many ecosystems across the globe, showing that very different ecosystems can have similar interactions with the atmosphere. Meteorological conditions seem to be the strongest interaction-shaping factor. This means that common principles can be identified to describe ecosystem behaviour.
Milan Flach, Alexander Brenning, Fabian Gans, Markus Reichstein, Sebastian Sippel, and Miguel D. Mahecha
Biogeosciences, 18, 39–53, https://doi.org/10.5194/bg-18-39-2021, https://doi.org/10.5194/bg-18-39-2021, 2021
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Drought and heat events affect the uptake and sequestration of carbon in terrestrial ecosystems. We study the impact of droughts and heatwaves on the uptake of CO2 of different vegetation types at the global scale. We find that agricultural areas are generally strongly affected. Forests instead are not particularly sensitive to the events under scrutiny. This implies different water management strategies of forests but also a lack of sensitivity to remote-sensing-derived vegetation activity.
B. Kraft, M. Jung, M. Körner, and M. Reichstein
Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci., XLIII-B2-2020, 1537–1544, https://doi.org/10.5194/isprs-archives-XLIII-B2-2020-1537-2020, https://doi.org/10.5194/isprs-archives-XLIII-B2-2020-1537-2020, 2020
Daniel E. Pabon-Moreno, Talie Musavi, Mirco Migliavacca, Markus Reichstein, Christine Römermann, and Miguel D. Mahecha
Biogeosciences, 17, 3991–4006, https://doi.org/10.5194/bg-17-3991-2020, https://doi.org/10.5194/bg-17-3991-2020, 2020
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Ecosystem CO2 uptake changes in time depending on climate conditions. In this study, we analyze how different climate variables affect the timing when CO2 uptake is at a maximum (DOYGPPmax). We found that the joint effects of radiation, temperature, and vapor pressure deficit are the most relevant controlling factors of DOYGPPmax and that if they increase, DOYGPPmax will happen earlier. These results help us to better understand how CO2 uptake could be affected by climate change.
Veronika Eyring, Lisa Bock, Axel Lauer, Mattia Righi, Manuel Schlund, Bouwe Andela, Enrico Arnone, Omar Bellprat, Björn Brötz, Louis-Philippe Caron, Nuno Carvalhais, Irene Cionni, Nicola Cortesi, Bas Crezee, Edouard L. Davin, Paolo Davini, Kevin Debeire, Lee de Mora, Clara Deser, David Docquier, Paul Earnshaw, Carsten Ehbrecht, Bettina K. Gier, Nube Gonzalez-Reviriego, Paul Goodman, Stefan Hagemann, Steven Hardiman, Birgit Hassler, Alasdair Hunter, Christopher Kadow, Stephan Kindermann, Sujan Koirala, Nikolay Koldunov, Quentin Lejeune, Valerio Lembo, Tomas Lovato, Valerio Lucarini, François Massonnet, Benjamin Müller, Amarjiit Pandde, Núria Pérez-Zanón, Adam Phillips, Valeriu Predoi, Joellen Russell, Alistair Sellar, Federico Serva, Tobias Stacke, Ranjini Swaminathan, Verónica Torralba, Javier Vegas-Regidor, Jost von Hardenberg, Katja Weigel, and Klaus Zimmermann
Geosci. Model Dev., 13, 3383–3438, https://doi.org/10.5194/gmd-13-3383-2020, https://doi.org/10.5194/gmd-13-3383-2020, 2020
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The Earth System Model Evaluation Tool (ESMValTool) is a community diagnostics and performance metrics tool designed to improve comprehensive and routine evaluation of earth system models (ESMs) participating in the Coupled Model Intercomparison Project (CMIP). It has undergone rapid development since the first release in 2016 and is now a well-tested tool that provides end-to-end provenance tracking to ensure reproducibility.
Guido Kraemer, Gustau Camps-Valls, Markus Reichstein, and Miguel D. Mahecha
Biogeosciences, 17, 2397–2424, https://doi.org/10.5194/bg-17-2397-2020, https://doi.org/10.5194/bg-17-2397-2020, 2020
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To closely monitor the state of our planet, we require systems that can monitor
the observation of many different properties at the same time. We create
indicators that resemble the behavior of many different simultaneous
observations. We apply the method to create indicators representing the
Earth's biosphere. The indicators show a productivity gradient and a water
gradient. The resulting indicators can detect a large number of changes and
extremes in the Earth system.
Martin Jung, Christopher Schwalm, Mirco Migliavacca, Sophia Walther, Gustau Camps-Valls, Sujan Koirala, Peter Anthoni, Simon Besnard, Paul Bodesheim, Nuno Carvalhais, Frédéric Chevallier, Fabian Gans, Daniel S. Goll, Vanessa Haverd, Philipp Köhler, Kazuhito Ichii, Atul K. Jain, Junzhi Liu, Danica Lombardozzi, Julia E. M. S. Nabel, Jacob A. Nelson, Michael O'Sullivan, Martijn Pallandt, Dario Papale, Wouter Peters, Julia Pongratz, Christian Rödenbeck, Stephen Sitch, Gianluca Tramontana, Anthony Walker, Ulrich Weber, and Markus Reichstein
Biogeosciences, 17, 1343–1365, https://doi.org/10.5194/bg-17-1343-2020, https://doi.org/10.5194/bg-17-1343-2020, 2020
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We test the approach of producing global gridded carbon fluxes based on combining machine learning with local measurements, remote sensing and climate data. We show that we can reproduce seasonal variations in carbon assimilated by plants via photosynthesis and in ecosystem net carbon balance. The ecosystem’s mean carbon balance and carbon flux trends require cautious interpretation. The analysis paves the way for future improvements of the data-driven assessment of carbon fluxes.
Lin Yu, Bernhard Ahrens, Thomas Wutzler, Marion Schrumpf, and Sönke Zaehle
Geosci. Model Dev., 13, 783–803, https://doi.org/10.5194/gmd-13-783-2020, https://doi.org/10.5194/gmd-13-783-2020, 2020
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In this paper, we have developed a new soil organic carbon model that describes the formation and turnover of soil organic matter in a more mechanistic manner. With this model, we are able to better represent how microorganisms and nutrient processes influence the below-ground carbon storage and better explain some observed features of soil organic matter. We hope this model can increase our confidence in predictions of future climate change, particularly on how soil can mitigate the process.
Miguel D. Mahecha, Fabian Gans, Gunnar Brandt, Rune Christiansen, Sarah E. Cornell, Normann Fomferra, Guido Kraemer, Jonas Peters, Paul Bodesheim, Gustau Camps-Valls, Jonathan F. Donges, Wouter Dorigo, Lina M. Estupinan-Suarez, Victor H. Gutierrez-Velez, Martin Gutwin, Martin Jung, Maria C. Londoño, Diego G. Miralles, Phillip Papastefanou, and Markus Reichstein
Earth Syst. Dynam., 11, 201–234, https://doi.org/10.5194/esd-11-201-2020, https://doi.org/10.5194/esd-11-201-2020, 2020
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The ever-growing availability of data streams on different subsystems of the Earth brings unprecedented scientific opportunities. However, researching a data-rich world brings novel challenges. We present the concept of
Earth system data cubesto study the complex dynamics of multiple climate and ecosystem variables across space and time. Using a series of example studies, we highlight the potential of effectively considering the full multivariate nature of processes in the Earth system.
Nora Linscheid, Lina M. Estupinan-Suarez, Alexander Brenning, Nuno Carvalhais, Felix Cremer, Fabian Gans, Anja Rammig, Markus Reichstein, Carlos A. Sierra, and Miguel D. Mahecha
Biogeosciences, 17, 945–962, https://doi.org/10.5194/bg-17-945-2020, https://doi.org/10.5194/bg-17-945-2020, 2020
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Vegetation typically responds to variation in temperature and rainfall within days. Yet seasonal changes in meteorological conditions, as well as decadal climate variability, additionally shape the state of ecosystems. It remains unclear how vegetation responds to climate variability on these different timescales. We find that the vegetation response to climate variability depends on the timescale considered. This scale dependency should be considered for modeling land–atmosphere interactions.
Javier Pacheco-Labrador, Tarek S. El-Madany, M. Pilar Martin, Rosario Gonzalez-Cascon, Arnaud Carrara, Gerardo Moreno, Oscar Perez-Priego, Tiana Hammer, Heiko Moossen, Kathrin Henkel, Olaf Kolle, David Martini, Vicente Burchard, Christiaan van der Tol, Karl Segl, Markus Reichstein, and Mirco Migliavacca
Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-501, https://doi.org/10.5194/bg-2019-501, 2020
Revised manuscript not accepted
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The new generation of sensors on-board satellites have the potential to provide richer information about the function of vegetation than before. This information, nowadays missing, is fundamental to improve our understanding and prediction of carbon and water cycles, and therefore to anticipate effects and responses to Climate Change. In this manuscript we propose a method to exploit the data provided by these satellites to successfully obtain this information key to face Climate Change.
Paul C. Stoy, Tarek S. El-Madany, Joshua B. Fisher, Pierre Gentine, Tobias Gerken, Stephen P. Good, Anne Klosterhalfen, Shuguang Liu, Diego G. Miralles, Oscar Perez-Priego, Angela J. Rigden, Todd H. Skaggs, Georg Wohlfahrt, Ray G. Anderson, A. Miriam J. Coenders-Gerrits, Martin Jung, Wouter H. Maes, Ivan Mammarella, Matthias Mauder, Mirco Migliavacca, Jacob A. Nelson, Rafael Poyatos, Markus Reichstein, Russell L. Scott, and Sebastian Wolf
Biogeosciences, 16, 3747–3775, https://doi.org/10.5194/bg-16-3747-2019, https://doi.org/10.5194/bg-16-3747-2019, 2019
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Key findings are the nearly optimal response of T to atmospheric water vapor pressure deficits across methods and scales. Additionally, the notion that T / ET intermittently approaches 1, which is a basis for many partitioning methods, does not hold for certain methods and ecosystems. To better constrain estimates of E and T from combined ET measurements, we propose a combination of independent measurement techniques to better constrain E and T at the ecosystem scale.
Sven Boese, Martin Jung, Nuno Carvalhais, Adriaan J. Teuling, and Markus Reichstein
Biogeosciences, 16, 2557–2572, https://doi.org/10.5194/bg-16-2557-2019, https://doi.org/10.5194/bg-16-2557-2019, 2019
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This study examines how limited water availability during droughts affects water-use efficiency. This metric describes how much carbon an ecosystem can assimilate for each unit of water lost by transpiration. We test how well different water-use efficiency models can capture the dynamics of transpiration decrease due to increased soil-water limitation. Accounting for the interacting effects of radiation and water limitation is necessary to accurately predict transpiration during these periods.
Richard K. F. Nair, Kendalynn A. Morris, Martin Hertel, Yunpeng Luo, Gerardo Moreno, Markus Reichstein, Marion Schrumpf, and Mirco Migliavacca
Biogeosciences, 16, 1883–1901, https://doi.org/10.5194/bg-16-1883-2019, https://doi.org/10.5194/bg-16-1883-2019, 2019
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We investigated how nutrient availability affects seasonal timing of root growth and death in a Spanish savanna, adapted to a long summer drought. We found that nitrogen (N) additions led to more root biomass but number of roots was higher with N and phosphorus together. These effects were strongly affected by the time of year. In autumn root growth occurred after leaf production. This has implications for how we understand biomass production and carbon uptake in these systems.
Xiahong Feng, Eric S. Posmentier, Leslie J. Sonder, and Naixin Fan
Atmos. Chem. Phys., 19, 4005–4024, https://doi.org/10.5194/acp-19-4005-2019, https://doi.org/10.5194/acp-19-4005-2019, 2019
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We present a 1-D model to simulate H2O isotopologues of vapor and their vertical fluxes in the first kilometer above the sea surface. The model includes two processes not in earlier Craig–Gordon isotope evaporation models: height-dependent diffusion/mixing and ascending/converging air. Calculated isotopic ratios compare well with data from seven cruises. The model explains how sea surface meteorology can affect atmospheric vapor, precipitation isotope ratios, and paleoisotope records.
Xiaolu Tang, Nuno Carvalhais, Catarina Moura, Bernhard Ahrens, Sujan Koirala, Shaohui Fan, Fengying Guan, Wenjie Zhang, Sicong Gao, Vincenzo Magliulo, Pauline Buysse, Shibin Liu, Guo Chen, Wunian Yang, Zhen Yu, Jingjing Liang, Leilei Shi, Shenyan Pu, and Markus Reichstein
Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-37, https://doi.org/10.5194/bg-2019-37, 2019
Preprint withdrawn
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Vegetation CUE is a key measure of carbon transfer from the atmosphere to terrestrial biomass. This study modelled global CUE with published observations using random forest. CUE varied with ecosystem types and spatially decreased with latitude, challenging the previous conclusion that CUE was independent of environmental controls. Our results emphasize a better understanding of environmental controls on CUE to reduce uncertainties in prognostic land-process model simulations.
Milan Flach, Sebastian Sippel, Fabian Gans, Ana Bastos, Alexander Brenning, Markus Reichstein, and Miguel D. Mahecha
Biogeosciences, 15, 6067–6085, https://doi.org/10.5194/bg-15-6067-2018, https://doi.org/10.5194/bg-15-6067-2018, 2018
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Northern forests enhanced their productivity during and before the 2010 Russian mega heatwave. We scrutinize this issue with a novel type of multivariate extreme event detection approach. Forests compensate for 54 % of the carbon losses in agricultural ecosystems due to vulnerable conditions in spring and better water management in summer. The findings highlight the importance of forests in mitigating climate change, while not alleviating the consequences of extreme events for food security.
Stefano Manzoni, Petr Čapek, Philipp Porada, Martin Thurner, Mattias Winterdahl, Christian Beer, Volker Brüchert, Jan Frouz, Anke M. Herrmann, Björn D. Lindahl, Steve W. Lyon, Hana Šantrůčková, Giulia Vico, and Danielle Way
Biogeosciences, 15, 5929–5949, https://doi.org/10.5194/bg-15-5929-2018, https://doi.org/10.5194/bg-15-5929-2018, 2018
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Carbon fixed by plants and phytoplankton through photosynthesis is ultimately stored in soils and sediments or released to the atmosphere during decomposition of dead biomass. Carbon-use efficiency is a useful metric to quantify the fate of carbon – higher efficiency means higher storage and lower release to the atmosphere. Here we summarize many definitions of carbon-use efficiency and study how this metric changes from organisms to ecosystems and from terrestrial to aquatic environments.
Thomas Wutzler, Antje Lucas-Moffat, Mirco Migliavacca, Jürgen Knauer, Kerstin Sickel, Ladislav Šigut, Olaf Menzer, and Markus Reichstein
Biogeosciences, 15, 5015–5030, https://doi.org/10.5194/bg-15-5015-2018, https://doi.org/10.5194/bg-15-5015-2018, 2018
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Net fluxes of carbon dioxide at the ecosystem level measured by eddy covariance are a main source for understanding biosphere–atmosphere interactions. However, there is a need for more usable and extensible tools for post-processing steps of the half-hourly flux data. Therefore, we developed the REddyProc package, providing data filtering, gap filling, and flux partitioning. The extensible functions are compatible with state-of-the-art tools but allow easier integration in extended analysis.
Tina Trautmann, Sujan Koirala, Nuno Carvalhais, Annette Eicker, Manfred Fink, Christoph Niemann, and Martin Jung
Hydrol. Earth Syst. Sci., 22, 4061–4082, https://doi.org/10.5194/hess-22-4061-2018, https://doi.org/10.5194/hess-22-4061-2018, 2018
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In this study, we adjust a simple hydrological model to several observational datasets, including satellite observations of the land's total water storage. We apply the model to northern latitudes and find that the dominating factor of changes in the total water storage depends on both the spatial and temporal scale of analysis. While snow dominates seasonal variations, liquid water determines year-to-year variations, yet with increasing contribution of snow when averaging over larger regions.
Paul Bodesheim, Martin Jung, Fabian Gans, Miguel D. Mahecha, and Markus Reichstein
Earth Syst. Sci. Data, 10, 1327–1365, https://doi.org/10.5194/essd-10-1327-2018, https://doi.org/10.5194/essd-10-1327-2018, 2018
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We provide continuous half-hourly carbon and energy fluxes for 2001 to 2014 at 0.5° spatial resolution, which allows for analyzing diurnal cycles globally. The data set contains four fluxes: gross primary production (GPP), net ecosystem exchange (NEE), latent heat (LE), and sensible heat (H). In addition, we provide a derived product that only contains monthly average diurnal cycles but which also enables us to study the important characteristics of subdaily patterns at a global scale.
Jacob A. Nelson, Nuno Carvalhais, Mirco Migliavacca, Markus Reichstein, and Martin Jung
Biogeosciences, 15, 2433–2447, https://doi.org/10.5194/bg-15-2433-2018, https://doi.org/10.5194/bg-15-2433-2018, 2018
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Plants have typical daily carbon uptake and water loss cycles. However, these cycles may change under periods of duress, such as water limitation. Here we identify two types of patterns in response to water limitations: a tendency to lose more water in the morning than afternoon and a decoupling of the carbon and water cycles. The findings show differences in responses by trees and grasses and suggest that morning shifts may be more efficient at gaining carbon per unit water used.
Jannis von Buttlar, Jakob Zscheischler, Anja Rammig, Sebastian Sippel, Markus Reichstein, Alexander Knohl, Martin Jung, Olaf Menzer, M. Altaf Arain, Nina Buchmann, Alessandro Cescatti, Damiano Gianelle, Gerard Kiely, Beverly E. Law, Vincenzo Magliulo, Hank Margolis, Harry McCaughey, Lutz Merbold, Mirco Migliavacca, Leonardo Montagnani, Walter Oechel, Marian Pavelka, Matthias Peichl, Serge Rambal, Antonio Raschi, Russell L. Scott, Francesco P. Vaccari, Eva van Gorsel, Andrej Varlagin, Georg Wohlfahrt, and Miguel D. Mahecha
Biogeosciences, 15, 1293–1318, https://doi.org/10.5194/bg-15-1293-2018, https://doi.org/10.5194/bg-15-1293-2018, 2018
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Our work systematically quantifies extreme heat and drought event impacts on gross primary productivity (GPP) and ecosystem respiration globally across a wide range of ecosystems. We show that heat extremes typically increased mainly respiration whereas drought decreased both fluxes. Combined heat and drought extremes had opposing effects offsetting each other for respiration, but there were also strong reductions in GPP and hence the strongest reductions in the ecosystems carbon sink capacity.
Wei Li, Philippe Ciais, Shushi Peng, Chao Yue, Yilong Wang, Martin Thurner, Sassan S. Saatchi, Almut Arneth, Valerio Avitabile, Nuno Carvalhais, Anna B. Harper, Etsushi Kato, Charles Koven, Yi Y. Liu, Julia E.M.S. Nabel, Yude Pan, Julia Pongratz, Benjamin Poulter, Thomas A. M. Pugh, Maurizio Santoro, Stephen Sitch, Benjamin D. Stocker, Nicolas Viovy, Andy Wiltshire, Rasoul Yousefpour, and Sönke Zaehle
Biogeosciences, 14, 5053–5067, https://doi.org/10.5194/bg-14-5053-2017, https://doi.org/10.5194/bg-14-5053-2017, 2017
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We used several observation-based biomass datasets to constrain the historical land-use change carbon emissions simulated by models. Compared to the range of the original modeled emissions (from 94 to 273 Pg C), the observationally constrained global cumulative emission estimate is 155 ± 50 Pg C (1σ Gaussian error) from 1901 to 2012. Our approach can also be applied to evaluate the LULCC impact of land-based climate mitigation policies.
Iulia Ilie, Peter Dittrich, Nuno Carvalhais, Martin Jung, Andreas Heinemeyer, Mirco Migliavacca, James I. L. Morison, Sebastian Sippel, Jens-Arne Subke, Matthew Wilkinson, and Miguel D. Mahecha
Geosci. Model Dev., 10, 3519–3545, https://doi.org/10.5194/gmd-10-3519-2017, https://doi.org/10.5194/gmd-10-3519-2017, 2017
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Accurate representation of land-atmosphere carbon fluxes is essential for future climate projections, although some of the responses of CO2 fluxes to climate often remain uncertain. The increase in available data allows for new approaches in their modelling. We automatically developed models for ecosystem and soil carbon respiration using a machine learning approach. When compared with established respiration models, we found that they are better in prediction as well as offering new insights.
Jakob Zscheischler, Miguel D. Mahecha, Valerio Avitabile, Leonardo Calle, Nuno Carvalhais, Philippe Ciais, Fabian Gans, Nicolas Gruber, Jens Hartmann, Martin Herold, Kazuhito Ichii, Martin Jung, Peter Landschützer, Goulven G. Laruelle, Ronny Lauerwald, Dario Papale, Philippe Peylin, Benjamin Poulter, Deepak Ray, Pierre Regnier, Christian Rödenbeck, Rosa M. Roman-Cuesta, Christopher Schwalm, Gianluca Tramontana, Alexandra Tyukavina, Riccardo Valentini, Guido van der Werf, Tristram O. West, Julie E. Wolf, and Markus Reichstein
Biogeosciences, 14, 3685–3703, https://doi.org/10.5194/bg-14-3685-2017, https://doi.org/10.5194/bg-14-3685-2017, 2017
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Here we synthesize a wide range of global spatiotemporal observational data on carbon exchanges between the Earth surface and the atmosphere. A key challenge was to consistently combining observational products of terrestrial and aquatic surfaces. Our primary goal is to identify today’s key uncertainties and observational shortcomings that would need to be addressed in future measurement campaigns or expansions of in situ observatories.
Milan Flach, Fabian Gans, Alexander Brenning, Joachim Denzler, Markus Reichstein, Erik Rodner, Sebastian Bathiany, Paul Bodesheim, Yanira Guanche, Sebastian Sippel, and Miguel D. Mahecha
Earth Syst. Dynam., 8, 677–696, https://doi.org/10.5194/esd-8-677-2017, https://doi.org/10.5194/esd-8-677-2017, 2017
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Anomalies and extremes are often detected using univariate peak-over-threshold approaches in the geoscience community. The Earth system is highly multivariate. We compare eight multivariate anomaly detection algorithms and combinations of data preprocessing. We identify three anomaly detection algorithms that outperform univariate extreme event detection approaches. The workflows have the potential to reveal novelties in data. Remarks on their application to real Earth observations are provided.
Sven Boese, Martin Jung, Nuno Carvalhais, and Markus Reichstein
Biogeosciences, 14, 3015–3026, https://doi.org/10.5194/bg-14-3015-2017, https://doi.org/10.5194/bg-14-3015-2017, 2017
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For plants, the ratio of carbon uptake to water loss by transpiration is usually thought to depend on characteristic properties (their adaption to water scarcity) and the dryness of the atmosphere at any given moment. We show that, on the ecosystem scale, radiation has an independent effect on this ratio that had not been previously considered. When including this variable in models, predictions of transpiration improve considerably.
Sebastian Sippel, Jakob Zscheischler, Miguel D. Mahecha, Rene Orth, Markus Reichstein, Martha Vogel, and Sonia I. Seneviratne
Earth Syst. Dynam., 8, 387–403, https://doi.org/10.5194/esd-8-387-2017, https://doi.org/10.5194/esd-8-387-2017, 2017
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The present study (1) evaluates land–atmosphere coupling in the CMIP5 multi-model ensemble against an ensemble of benchmarking datasets and (2) refines the model ensemble using a land–atmosphere coupling diagnostic as constraint. Our study demonstrates that a considerable fraction of coupled climate models overemphasize warm-season
moisture-limitedclimate regimes in midlatitude regions. This leads to biases in daily-scale temperature extremes, which are alleviated in a constrained ensemble.
Sebastian Sippel, Jakob Zscheischler, Martin Heimann, Holger Lange, Miguel D. Mahecha, Geert Jan van Oldenborgh, Friederike E. L. Otto, and Markus Reichstein
Hydrol. Earth Syst. Sci., 21, 441–458, https://doi.org/10.5194/hess-21-441-2017, https://doi.org/10.5194/hess-21-441-2017, 2017
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The paper re-investigates the question whether observed precipitation extremes and annual totals have been increasing in the world's dry regions over the last 60 years. Despite recently postulated increasing trends, we demonstrate that large uncertainties prevail due to (1) the choice of dryness definition and (2) statistical data processing. In fact, we find only minor (and only some significant) increases if (1) dryness is based on aridity and (2) statistical artefacts are accounted for.
Gregor J. Schürmann, Thomas Kaminski, Christoph Köstler, Nuno Carvalhais, Michael Voßbeck, Jens Kattge, Ralf Giering, Christian Rödenbeck, Martin Heimann, and Sönke Zaehle
Geosci. Model Dev., 9, 2999–3026, https://doi.org/10.5194/gmd-9-2999-2016, https://doi.org/10.5194/gmd-9-2999-2016, 2016
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We describe the Max Planck Institute Carbon Cycle Data Assimilation System (MPI-CCDAS). The system improves the modelled carbon cycle of the terrestrial biosphere by systematically confronting (or assimilating) the model with observations of atmospheric CO2 and fractions of absorbed photosynthetically active radiation. Jointly assimilating both data streams outperforms the single-data stream experiments, thus showing the value of a multi-data stream assimilation.
Gianluca Tramontana, Martin Jung, Christopher R. Schwalm, Kazuhito Ichii, Gustau Camps-Valls, Botond Ráduly, Markus Reichstein, M. Altaf Arain, Alessandro Cescatti, Gerard Kiely, Lutz Merbold, Penelope Serrano-Ortiz, Sven Sickert, Sebastian Wolf, and Dario Papale
Biogeosciences, 13, 4291–4313, https://doi.org/10.5194/bg-13-4291-2016, https://doi.org/10.5194/bg-13-4291-2016, 2016
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We have evaluated 11 machine learning (ML) methods and two complementary drivers' setup to estimate the carbon dioxide (CO2) and energy exchanges between land ecosystems and atmosphere. Obtained results have shown high consistency among ML and high capability to estimate the spatial and seasonal variability of the target fluxes. The results were good for all the ecosystems, with limitations to the ones in the extreme environments (cold, hot) or less represented in the training data (tropics).
S. Sippel, F. E. L. Otto, M. Forkel, M. R. Allen, B. P. Guillod, M. Heimann, M. Reichstein, S. I. Seneviratne, K. Thonicke, and M. D. Mahecha
Earth Syst. Dynam., 7, 71–88, https://doi.org/10.5194/esd-7-71-2016, https://doi.org/10.5194/esd-7-71-2016, 2016
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We introduce a novel technique to bias correct climate model output for impact simulations that preserves its physical consistency and multivariate structure. The methodology considerably improves the representation of extremes in climatic variables relative to conventional bias correction strategies. Illustrative simulations of biosphere–atmosphere carbon and water fluxes with a biosphere model (LPJmL) show that the novel technique can be usefully applied to drive climate impact models.
O. Perez-Priego, J. Guan, M. Rossini, F. Fava, T. Wutzler, G. Moreno, N. Carvalhais, A. Carrara, O. Kolle, T. Julitta, M. Schrumpf, M. Reichstein, and M. Migliavacca
Biogeosciences, 12, 6351–6367, https://doi.org/10.5194/bg-12-6351-2015, https://doi.org/10.5194/bg-12-6351-2015, 2015
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Sun-induced chlorophyll fluorescence and photochemical reflectance index revealed controls of climate and nutrient availability on photosynthesis (gross primary production, GPP). Meteo-driven models (MMs) were unable to describe nutrient-induced effects on GPP. Important implications can be derived from these results, and uncertainties in the prediction of global GPP still remain when MMs do not account for plant nutrient availability.
S. Hashimoto, N. Carvalhais, A. Ito, M. Migliavacca, K. Nishina, and M. Reichstein
Biogeosciences, 12, 4121–4132, https://doi.org/10.5194/bg-12-4121-2015, https://doi.org/10.5194/bg-12-4121-2015, 2015
A. C. Spessa, R. D. Field, F. Pappenberger, A. Langner, S. Englhart, U. Weber, T. Stockdale, F. Siegert, J. W. Kaiser, and J. Moore
Nat. Hazards Earth Syst. Sci., 15, 429–442, https://doi.org/10.5194/nhess-15-429-2015, https://doi.org/10.5194/nhess-15-429-2015, 2015
M. Forkel, N. Carvalhais, S. Schaphoff, W. v. Bloh, M. Migliavacca, M. Thurner, and K. Thonicke
Biogeosciences, 11, 7025–7050, https://doi.org/10.5194/bg-11-7025-2014, https://doi.org/10.5194/bg-11-7025-2014, 2014
P. Ciais, A. J. Dolman, A. Bombelli, R. Duren, A. Peregon, P. J. Rayner, C. Miller, N. Gobron, G. Kinderman, G. Marland, N. Gruber, F. Chevallier, R. J. Andres, G. Balsamo, L. Bopp, F.-M. Bréon, G. Broquet, R. Dargaville, T. J. Battin, A. Borges, H. Bovensmann, M. Buchwitz, J. Butler, J. G. Canadell, R. B. Cook, R. DeFries, R. Engelen, K. R. Gurney, C. Heinze, M. Heimann, A. Held, M. Henry, B. Law, S. Luyssaert, J. Miller, T. Moriyama, C. Moulin, R. B. Myneni, C. Nussli, M. Obersteiner, D. Ojima, Y. Pan, J.-D. Paris, S. L. Piao, B. Poulter, S. Plummer, S. Quegan, P. Raymond, M. Reichstein, L. Rivier, C. Sabine, D. Schimel, O. Tarasova, R. Valentini, R. Wang, G. van der Werf, D. Wickland, M. Williams, and C. Zehner
Biogeosciences, 11, 3547–3602, https://doi.org/10.5194/bg-11-3547-2014, https://doi.org/10.5194/bg-11-3547-2014, 2014
X. Wu, F. Babst, P. Ciais, D. Frank, M. Reichstein, M. Wattenbach, C. Zang, and M. D. Mahecha
Biogeosciences, 11, 3057–3068, https://doi.org/10.5194/bg-11-3057-2014, https://doi.org/10.5194/bg-11-3057-2014, 2014
S. Vicca, M. Bahn, M. Estiarte, E. E. van Loon, R. Vargas, G. Alberti, P. Ambus, M. A. Arain, C. Beier, L. P. Bentley, W. Borken, N. Buchmann, S. L. Collins, G. de Dato, J. S. Dukes, C. Escolar, P. Fay, G. Guidolotti, P. J. Hanson, A. Kahmen, G. Kröel-Dulay, T. Ladreiter-Knauss, K. S. Larsen, E. Lellei-Kovacs, E. Lebrija-Trejos, F. T. Maestre, S. Marhan, M. Marshall, P. Meir, Y. Miao, J. Muhr, P. A. Niklaus, R. Ogaya, J. Peñuelas, C. Poll, L. E. Rustad, K. Savage, A. Schindlbacher, I. K. Schmidt, A. R. Smith, E. D. Sotta, V. Suseela, A. Tietema, N. van Gestel, O. van Straaten, S. Wan, U. Weber, and I. A. Janssens
Biogeosciences, 11, 2991–3013, https://doi.org/10.5194/bg-11-2991-2014, https://doi.org/10.5194/bg-11-2991-2014, 2014
J. Zscheischler, M. Reichstein, S. Harmeling, A. Rammig, E. Tomelleri, and M. D. Mahecha
Biogeosciences, 11, 2909–2924, https://doi.org/10.5194/bg-11-2909-2014, https://doi.org/10.5194/bg-11-2909-2014, 2014
B. Ahrens, M. Reichstein, W. Borken, J. Muhr, S. E. Trumbore, and T. Wutzler
Biogeosciences, 11, 2147–2168, https://doi.org/10.5194/bg-11-2147-2014, https://doi.org/10.5194/bg-11-2147-2014, 2014
B. Badawy, C. Rödenbeck, M. Reichstein, N. Carvalhais, and M. Heimann
Biogeosciences, 10, 6485–6508, https://doi.org/10.5194/bg-10-6485-2013, https://doi.org/10.5194/bg-10-6485-2013, 2013
B. Mueller, M. Hirschi, C. Jimenez, P. Ciais, P. A. Dirmeyer, A. J. Dolman, J. B. Fisher, M. Jung, F. Ludwig, F. Maignan, D. G. Miralles, M. F. McCabe, M. Reichstein, J. Sheffield, K. Wang, E. F. Wood, Y. Zhang, and S. I. Seneviratne
Hydrol. Earth Syst. Sci., 17, 3707–3720, https://doi.org/10.5194/hess-17-3707-2013, https://doi.org/10.5194/hess-17-3707-2013, 2013
M. C. Braakhekke, T. Wutzler, C. Beer, J. Kattge, M. Schrumpf, B. Ahrens, I. Schöning, M. R. Hoosbeek, B. Kruijt, P. Kabat, and M. Reichstein
Biogeosciences, 10, 399–420, https://doi.org/10.5194/bg-10-399-2013, https://doi.org/10.5194/bg-10-399-2013, 2013
G. Lasslop, M. Migliavacca, G. Bohrer, M. Reichstein, M. Bahn, A. Ibrom, C. Jacobs, P. Kolari, D. Papale, T. Vesala, G. Wohlfahrt, and A. Cescatti
Biogeosciences, 9, 5243–5259, https://doi.org/10.5194/bg-9-5243-2012, https://doi.org/10.5194/bg-9-5243-2012, 2012
Related subject area
Biogeosciences and biodiversity
A 30 m annual maize phenology dataset from 1985 to 2020 in China
Optical and biogeochemical properties of diverse Belgian inland and coastal waters
Comparing national greenhouse gas budgets reported in UNFCCC inventories against atmospheric inversions
European pollen-based REVEALS land-cover reconstructions for the Holocene: methodology, mapping and potentials
Global GOSAT, OCO-2, and OCO-3 solar-induced chlorophyll fluorescence datasets
The Reading Palaeofire Database: an expanded global resource to document changes in fire regimes from sedimentary charcoal records
VODCA2GPP – a new, global, long-term (1988–2020) gross primary production dataset from microwave remote sensing
LegacyPollen 1.0: A taxonomically harmonized global Late Quaternary pollen dataset of 2831 records with standardized chronologies
EcoDes-DK15: high-resolution ecological descriptors of vegetation and terrain derived from Denmark's national airborne laser scanning data set
Individual tree point clouds and tree measurements from multi-platform laser scanning in German forests
The ABCflux database: Arctic–boreal CO2 flux observations and ancillary information aggregated to monthly time steps across terrestrial ecosystems
Multi-year, spatially extensive, watershed-scale synoptic stream chemistry and water quality conditions for six permafrost-underlain Arctic watersheds
Vertical profiles of leaf photosynthesis and leaf traits and soil nutrients in two tropical rainforests in French Guiana before and after a 3-year nitrogen and phosphorus addition experiment
Global patterns and drivers of soil total phosphorus concentration
The TROPOSIF global sun-induced fluorescence dataset from the Sentinel-5P TROPOMI mission
Patterns of nitrogen and phosphorus pools in terrestrial ecosystems in China
BAWLD-CH4: a comprehensive dataset of methane fluxes from boreal and arctic ecosystems
Mapping global forest age from forest inventories, biomass and climate data
Long-term phenological data set of multi-taxonomic groups, agrarian activities, and abiotic parameters from Latvia, northern Europe
A global map of root biomass across the world's forests
Organic matter cycling along geochemical, geomorphic, and disturbance gradients in forest and cropland of the African Tropics – project TropSOC database version 1.0
The global forest above-ground biomass pool for 2010 estimated from high-resolution satellite observations
FLUXNET-CH4: a global, multi-ecosystem dataset and analysis of methane seasonality from freshwater wetlands
A distributed time-lapse camera network to track vegetation phenology with high temporal detail and at varying scales
Global transpiration data from sap flow measurements: the SAPFLUXNET database
MOSAIC (Modern Ocean Sediment Archive and Inventory of Carbon): a (radio)carbon-centric database for seafloor surficial sediments
Development of the global dataset of Wetland Area and Dynamics for Methane Modeling (WAD2M)
MOSEV: a global burn severity database from MODIS (2000–2020)
SoDaH: the SOils DAta Harmonization database, an open-source synthesis of soil data from research networks, version 1.0
Gap-free global annual soil moisture: 15 km grids for 1991–2018
Carbon emissions and removals from forests: new estimates, 1990–2020
Standardized flux seasonality metrics: a companion dataset for FLUXNET annual product
LUCAS Copernicus 2018: Earth-observation-relevant in situ data on land cover and use throughout the European Union
The fortedata R package: open-science datasets from a manipulative experiment testing forest resilience
Seabed video and still images from the northern Weddell Sea and the western flanks of the Powell Basin
Production and application of manure nitrogen and phosphorus in the United States since 1860
Synchronized high-resolution bed-level change and biophysical data from 10 marsh–mudflat sites in northwestern Europe
Carbon Monitoring System Flux Net Biosphere Exchange 2020 (CMS-Flux NBE 2020)
A daily, 250 m and real-time gross primary productivity product (2000–present) covering the contiguous United States
A satellite-derived database for stand-replacing windthrow events in boreal forests of European Russia in 1986–2017
Drainage of organic soils and GHG emissions: validation with country data
Element and radionuclide concentrations in soils and wildlife from forests in north-eastern England with a focus on species representative of the ICRP's Reference Animals and Plants
A comprehensive dataset of vegetation states, fluxes of matter and energy, weather, agricultural management, and soil properties from intensively monitored crop sites in western Germany
Decomposability of soil organic matter over time: the Soil Incubation Database (SIDb, version 1.0) and guidance for incubation procedures
The PROFOUND Database for evaluating vegetation models and simulating climate impacts on European forests
A spatially downscaled sun-induced fluorescence global product for enhanced monitoring of vegetation productivity
Spatial and temporal patterns of global soil heterotrophic respiration in terrestrial ecosystems
Observations of late-winter marine microbial activity in an ice-covered fjord, west Greenland
Mapping the yields of lignocellulosic bioenergy crops from observations at the global scale
A spatially explicit database of wind disturbances in European forests over the period 2000–2018
Quandi Niu, Xuecao Li, Jianxi Huang, Hai Huang, Xianda Huang, Wei Su, and Wenping Yuan
Earth Syst. Sci. Data, 14, 2851–2864, https://doi.org/10.5194/essd-14-2851-2022, https://doi.org/10.5194/essd-14-2851-2022, 2022
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In this paper we generated the first national maize phenology product with a fine spatial resolution (30 m) and a long temporal span (1985–2020) in China, using Landsat images. The derived phenological indicators agree with in situ observations and provide more spatial details than moderate resolution phenology products. The extracted maize phenology dataset can support precise yield estimation and deepen our understanding of the response of agroecosystem to global warming in the future.
Alexandre Castagna, Luz Amadei Martínez, Margarita Bogorad, Ilse Daveloose, Renaat Dasseville, Heidi Melita Dierssen, Matthew Beck, Jonas Mortelmans, Héloïse Lavigne, Ana Dogliotti, David Doxaran, Kevin Ruddick, Wim Vyverman, and Koen Sabbe
Earth Syst. Sci. Data, 14, 2697–2719, https://doi.org/10.5194/essd-14-2697-2022, https://doi.org/10.5194/essd-14-2697-2022, 2022
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Here we describe a dataset of optical measurements paired with the concentration and composition of dissolved and particulate components of water systems in Belgium. Sampling was performed over eight lakes, a coastal lagoon, an estuary, and coastal waters, covering the period of 2017 to 2019. The data cover a broad range of conditions and can be useful for development and evaluation of hyperspectral methods in hydrology optics and remote sensing.
Zhu Deng, Philippe Ciais, Zitely A. Tzompa-Sosa, Marielle Saunois, Chunjing Qiu, Chang Tan, Taochun Sun, Piyu Ke, Yanan Cui, Katsumasa Tanaka, Xin Lin, Rona L. Thompson, Hanqin Tian, Yuanzhi Yao, Yuanyuan Huang, Ronny Lauerwald, Atul K. Jain, Xiaoming Xu, Ana Bastos, Stephen Sitch, Paul I. Palmer, Thomas Lauvaux, Alexandre d'Aspremont, Clément Giron, Antoine Benoit, Benjamin Poulter, Jinfeng Chang, Ana Maria Roxana Petrescu, Steven J. Davis, Zhu Liu, Giacomo Grassi, Clément Albergel, Francesco N. Tubiello, Lucia Perugini, Wouter Peters, and Frédéric Chevallier
Earth Syst. Sci. Data, 14, 1639–1675, https://doi.org/10.5194/essd-14-1639-2022, https://doi.org/10.5194/essd-14-1639-2022, 2022
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In support of the global stocktake of the Paris Agreement on climate change, we proposed a method for reconciling the results of global atmospheric inversions with data from UNFCCC national greenhouse gas inventories (NGHGIs). Here, based on a new global harmonized database that we compiled from the UNFCCC NGHGIs and a comprehensive framework presented in this study to process the results of inversions, we compared their results of carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O).
Esther Githumbi, Ralph Fyfe, Marie-Jose Gaillard, Anna-Kari Trondman, Florence Mazier, Anne-Birgitte Nielsen, Anneli Poska, Shinya Sugita, Jessie Woodbridge, Julien Azuara, Angelica Feurdean, Roxana Grindean, Vincent Lebreton, Laurent Marquer, Nathalie Nebout-Combourieu, Miglė Stančikaitė, Ioan Tanţău, Spassimir Tonkov, Lyudmila Shumilovskikh, and LandClimII data contributors
Earth Syst. Sci. Data, 14, 1581–1619, https://doi.org/10.5194/essd-14-1581-2022, https://doi.org/10.5194/essd-14-1581-2022, 2022
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Reconstruction of past land cover is necessary for the study of past climate–land cover interactions and the evaluation of climate models and land-use scenarios. We used 1128 available pollen records from across Europe covering the last 11 700 years in the REVEALS model to calculate percentage cover and associated standard errors for 31 taxa, 12 plant functional types and 3 land-cover types. REVEALS results are reliant on the quality of the input datasets.
Russell Doughty, Thomas P. Kurosu, Nicholas Parazoo, Philipp Köhler, Yujie Wang, Ying Sun, and Christian Frankenberg
Earth Syst. Sci. Data, 14, 1513–1529, https://doi.org/10.5194/essd-14-1513-2022, https://doi.org/10.5194/essd-14-1513-2022, 2022
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We describe and compare solar-induced chlorophyll fluorescence data produced by NASA from the Greenhouse Gases Observing Satellite (GOSAT) and the Orbiting Carbon Observatory-2 (OCO-2) and OCO-3 platforms.
Sandy P. Harrison, Roberto Villegas-Diaz, Esmeralda Cruz-Silva, Daniel Gallagher, David Kesner, Paul Lincoln, Yicheng Shen, Luke Sweeney, Daniele Colombaroli, Adam Ali, Chéïma Barhoumi, Yves Bergeron, Tatiana Blyakharchuk, Přemysl Bobek, Richard Bradshaw, Jennifer L. Clear, Sambor Czerwiński, Anne-Laure Daniau, John Dodson, Kevin J. Edwards, Mary E. Edwards, Angelica Feurdean, David Foster, Konrad Gajewski, Mariusz Gałka, Michelle Garneau, Thomas Giesecke, Graciela Gil Romera, Martin P. Girardin, Dana Hoefer, Kangyou Huang, Jun Inoue, Eva Jamrichová, Nauris Jasiunas, Wenying Jiang, Gonzalo Jiménez-Moreno, Monika Karpińska-Kołaczek, Piotr Kołaczek, Niina Kuosmanen, Mariusz Lamentowicz, Martin Lavoie, Fang Li, Jianyong Li, Olga Lisitsyna, José Antonio López-Sáez, Reyes Luelmo-Lautenschlaeger, Gabriel Magnan, Eniko Katalin Magyari, Alekss Maksims, Katarzyna Marcisz, Elena Marinova, Jenn Marlon, Scott Mensing, Joanna Miroslaw-Grabowska, Wyatt Oswald, Sebastián Pérez-Díaz, Ramón Pérez-Obiol, Sanna Piilo, Anneli Poska, Xiaoguang Qin, Cécile C. Remy, Pierre J. H. Richard, Sakari Salonen, Naoko Sasaki, Hieke Schneider, William Shotyk, Migle Stancikaite, Dace Šteinberga, Normunds Stivrins, Hikaru Takahara, Zhihai Tan, Liva Trasune, Charles E. Umbanhowar, Minna Väliranta, Jüri Vassiljev, Xiayun Xiao, Qinghai Xu, Xin Xu, Edyta Zawisza, Yan Zhao, Zheng Zhou, and Jordan Paillard
Earth Syst. Sci. Data, 14, 1109–1124, https://doi.org/10.5194/essd-14-1109-2022, https://doi.org/10.5194/essd-14-1109-2022, 2022
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We provide a new global data set of charcoal preserved in sediments that can be used to examine how fire regimes have changed during past millennia and to investigate what caused these changes. The individual records have been standardised, and new age models have been constructed to allow better comparison across sites. The data set contains 1681 records from 1477 sites worldwide.
Benjamin Wild, Irene Teubner, Leander Moesinger, Ruxandra-Maria Zotta, Matthias Forkel, Robin van der Schalie, Stephen Sitch, and Wouter Dorigo
Earth Syst. Sci. Data, 14, 1063–1085, https://doi.org/10.5194/essd-14-1063-2022, https://doi.org/10.5194/essd-14-1063-2022, 2022
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Gross primary production (GPP) describes the conversion of CO2 to carbohydrates and can be seen as a filter for our atmosphere of the primary greenhouse gas CO2. We developed VODCA2GPP, a GPP dataset that is based on vegetation optical depth from microwave remote sensing and temperature. Thus, it is mostly independent from existing GPP datasets and also available in regions with frequent cloud coverage. Analysis showed that VODCA2GPP is able to complement existing state-of-the-art GPP datasets.
Ulrike Herzschuh, Chenzhi Li, Thomas Böhmer, Alexander K. Postl, Birgit Heim, Andrei A. Andreev, Xianyong Cao, Mareike Wieczorek, and Jian Ni
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2022-37, https://doi.org/10.5194/essd-2022-37, 2022
Revised manuscript accepted for ESSD
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Pollen preserved in environmental archives like lake sediments and bogs are broadly used for the reconstructions of past vegetation and climate. Here we present LegacyPollen 1.0, a dataset of 2831 fossil pollen records from all over the globe that were collected from publicly available databases. We harmonized the names of the pollen taxa so that all datasets can be jointly investigated. LegacyPollen 1.0 is available as an open-access dataset.
Jakob J. Assmann, Jesper E. Moeslund, Urs A. Treier, and Signe Normand
Earth Syst. Sci. Data, 14, 823–844, https://doi.org/10.5194/essd-14-823-2022, https://doi.org/10.5194/essd-14-823-2022, 2022
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In 2014 and 2015, the Danish government scanned the whole of Denmark using laser scanners on planes. The information can help biologists learn more about Denmark's natural environment. To make it easier to access the outputs from the scan, we divided the country into 10 m x 10 m squares and summed up the information most relevant to biologists for each square. The result is a set of 70 maps describing the three-dimensional architecture of the Danish landscape and vegetation.
Hannah Weiser, Jannika Schäfer, Lukas Winiwarter, Nina Krašovec, Fabian Ewald Fassnacht, and Bernhard Höfle
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2022-39, https://doi.org/10.5194/essd-2022-39, 2022
Revised manuscript accepted for ESSD
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3D point clouds, acquired by laser scanning, allows us to retrieve information about the forest structure and individual tree properties. We conducted airborne, UAV-borne, and terrestrial laser scanning in German mixed forests, resulting in overlapping point clouds with different characteristics. From these, we generated a comprehensive database of individual tree point clouds and corresponding tree metrics. Our dataset may serve as a benchmark dataset for algorithms in forestry research.
Anna-Maria Virkkala, Susan M. Natali, Brendan M. Rogers, Jennifer D. Watts, Kathleen Savage, Sara June Connon, Marguerite Mauritz, Edward A. G. Schuur, Darcy Peter, Christina Minions, Julia Nojeim, Roisin Commane, Craig A. Emmerton, Mathias Goeckede, Manuel Helbig, David Holl, Hiroki Iwata, Hideki Kobayashi, Pasi Kolari, Efrén López-Blanco, Maija E. Marushchak, Mikhail Mastepanov, Lutz Merbold, Frans-Jan W. Parmentier, Matthias Peichl, Torsten Sachs, Oliver Sonnentag, Masahito Ueyama, Carolina Voigt, Mika Aurela, Julia Boike, Gerardo Celis, Namyi Chae, Torben R. Christensen, M. Syndonia Bret-Harte, Sigrid Dengel, Han Dolman, Colin W. Edgar, Bo Elberling, Eugenie Euskirchen, Achim Grelle, Juha Hatakka, Elyn Humphreys, Järvi Järveoja, Ayumi Kotani, Lars Kutzbach, Tuomas Laurila, Annalea Lohila, Ivan Mammarella, Yojiro Matsuura, Gesa Meyer, Mats B. Nilsson, Steven F. Oberbauer, Sang-Jong Park, Roman Petrov, Anatoly S. Prokushkin, Christopher Schulze, Vincent L. St. Louis, Eeva-Stiina Tuittila, Juha-Pekka Tuovinen, William Quinton, Andrej Varlagin, Donatella Zona, and Viacheslav I. Zyryanov
Earth Syst. Sci. Data, 14, 179–208, https://doi.org/10.5194/essd-14-179-2022, https://doi.org/10.5194/essd-14-179-2022, 2022
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The effects of climate warming on carbon cycling across the Arctic–boreal zone (ABZ) remain poorly understood due to the relatively limited distribution of ABZ flux sites. Fortunately, this flux network is constantly increasing, but new measurements are published in various platforms, making it challenging to understand the ABZ carbon cycle as a whole. Here, we compiled a new database of Arctic–boreal CO2 fluxes to help facilitate large-scale assessments of the ABZ carbon cycle.
Arial J. Shogren, Jay P. Zarnetske, Benjamin W. Abbott, Samuel Bratsman, Brian Brown, Michael P. Carey, Randy Fulweber, Heather E. Greaves, Emma Haines, Frances Iannucci, Joshua C. Koch, Alexander Medvedeff, Jonathan A. O'Donnell, Leika Patch, Brett A. Poulin, Tanner J. Williamson, and William B. Bowden
Earth Syst. Sci. Data, 14, 95–116, https://doi.org/10.5194/essd-14-95-2022, https://doi.org/10.5194/essd-14-95-2022, 2022
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Rapidly sampling multiple points in an entire river network provides a high-resolution snapshot in time that can reveal where nutrients and carbon are being taken up and released. Here, we describe two such datasets of river network chemistry in six Arctic watersheds in northern Alaska. We describe how these repeated snapshots can be used as an indicator of ecosystem response to climate change and to improve predictions of future release of carbon, nutrient, and other solutes.
Lore T. Verryckt, Sara Vicca, Leandro Van Langenhove, Clément Stahl, Dolores Asensio, Ifigenia Urbina, Romà Ogaya, Joan Llusià, Oriol Grau, Guille Peguero, Albert Gargallo-Garriga, Elodie A. Courtois, Olga Margalef, Miguel Portillo-Estrada, Philippe Ciais, Michael Obersteiner, Lucia Fuchslueger, Laynara F. Lugli, Pere-Roc Fernandez-Garberí, Helena Vallicrosa, Melanie Verlinden, Christian Ranits, Pieter Vermeir, Sabrina Coste, Erik Verbruggen, Laëtitia Bréchet, Jordi Sardans, Jérôme Chave, Josep Peñuelas, and Ivan A. Janssens
Earth Syst. Sci. Data, 14, 5–18, https://doi.org/10.5194/essd-14-5-2022, https://doi.org/10.5194/essd-14-5-2022, 2022
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We provide a comprehensive dataset of vertical profiles of photosynthesis and important leaf traits, including leaf N and P concentrations, from two 3-year, large-scale nutrient addition experiments conducted in two tropical rainforests in French Guiana. These data present a unique source of information to further improve model representations of the roles of N and P, and other leaf nutrients, in photosynthesis in tropical forests.
Xianjin He, Laurent Augusto, Daniel S. Goll, Bruno Ringeval, Yingping Wang, Julian Helfenstein, Yuanyuan Huang, Kailiang Yu, Zhiqiang Wang, Yongchuan Yang, and Enqing Hou
Earth Syst. Sci. Data, 13, 5831–5846, https://doi.org/10.5194/essd-13-5831-2021, https://doi.org/10.5194/essd-13-5831-2021, 2021
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Our database of globally distributed natural soil total P (STP) concentration showed concentration ranged from 1.4 to 9630.0 (mean 570.0) mg kg−1. Global predictions of STP concentration increased with latitude. Global STP stocks (excluding Antarctica) were estimated to be 26.8 and 62.2 Pg in the topsoil and subsoil, respectively. Our global map of STP concentration can be used to constrain Earth system models representing the P cycle and to inform quantification of global soil P availability.
Luis Guanter, Cédric Bacour, Andreas Schneider, Ilse Aben, Tim A. van Kempen, Fabienne Maignan, Christian Retscher, Philipp Köhler, Christian Frankenberg, Joanna Joiner, and Yongguang Zhang
Earth Syst. Sci. Data, 13, 5423–5440, https://doi.org/10.5194/essd-13-5423-2021, https://doi.org/10.5194/essd-13-5423-2021, 2021
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Sun-induced chlorophyll fluorescence (SIF) is an electromagnetic signal emitted by plants in the red and far-red parts of the spectrum. It has a functional link to photosynthesis and can be measured by satellite instruments, which makes it an important variable for the remote monitoring of the photosynthetic activity of vegetation ecosystems around the world. In this contribution we present a SIF dataset derived from the new Sentinel-5P TROPOMI missions.
Yi-Wei Zhang, Yanpei Guo, Zhiyao Tang, Yuhao Feng, Xinrong Zhu, Wenting Xu, Yongfei Bai, Guoyi Zhou, Zongqiang Xie, and Jingyun Fang
Earth Syst. Sci. Data, 13, 5337–5351, https://doi.org/10.5194/essd-13-5337-2021, https://doi.org/10.5194/essd-13-5337-2021, 2021
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Nitrogen (N) and phosphorus (P) are limiting nutrients for ecosystem productivity. For the first time, we mapped N and P densities of living plants, litter, and soil in forest, shrubland, and grassland ecosystems across China using random forest models based on a dataset of 4868 field sites. Our results depicted the spatial distribution pattern, the total pool, and the allocation among ecosystem components of N and P, which could benefit a more precise prediction of the carbon cycle.
McKenzie A. Kuhn, Ruth K. Varner, David Bastviken, Patrick Crill, Sally MacIntyre, Merritt Turetsky, Katey Walter Anthony, Anthony D. McGuire, and David Olefeldt
Earth Syst. Sci. Data, 13, 5151–5189, https://doi.org/10.5194/essd-13-5151-2021, https://doi.org/10.5194/essd-13-5151-2021, 2021
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Methane (CH4) emissions from the boreal–Arctic region are globally significant, but the current magnitude of annual emissions is not well defined. Here we present a dataset of surface CH4 fluxes from northern wetlands, lakes, and uplands that was built alongside a compatible land cover dataset, sharing the same classifications. We show CH4 fluxes can be split by broad land cover characteristics. The dataset is useful for comparison against new field data and model parameterization or validation.
Simon Besnard, Sujan Koirala, Maurizio Santoro, Ulrich Weber, Jacob Nelson, Jonas Gütter, Bruno Herault, Justin Kassi, Anny N'Guessan, Christopher Neigh, Benjamin Poulter, Tao Zhang, and Nuno Carvalhais
Earth Syst. Sci. Data, 13, 4881–4896, https://doi.org/10.5194/essd-13-4881-2021, https://doi.org/10.5194/essd-13-4881-2021, 2021
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Forest age can determine the capacity of a forest to uptake carbon from the atmosphere. Yet, a lack of global diagnostics that reflect the forest stage and associated disturbance regimes hampers the quantification of age-related differences in forest carbon dynamics. In this paper, we introduced a new global distribution of forest age inferred from forest inventory, remote sensing and climate data in support of a better understanding of the global dynamics in the forest water and carbon cycles.
Gunta Kalvāne, Andis Kalvāns, and Andris Ģērmanis
Earth Syst. Sci. Data, 13, 4621–4633, https://doi.org/10.5194/essd-13-4621-2021, https://doi.org/10.5194/essd-13-4621-2021, 2021
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A phenological (seasonal occurrences) data set in Latvia, northern Europe, is presented. It includes phenological phases of eight taxonomic groups such as timing of leaf unfolding, bird migration, and leaf senescence as well as weather phenomena and agrarian activities from 1979 to 2018. The data provide direct and compelling evidence of climate change like earlier spring blossom and delayed autumn phases of some migratory birds and plants in recent years.
Yuanyuan Huang, Phillipe Ciais, Maurizio Santoro, David Makowski, Jerome Chave, Dmitry Schepaschenko, Rose Z. Abramoff, Daniel S. Goll, Hui Yang, Ye Chen, Wei Wei, and Shilong Piao
Earth Syst. Sci. Data, 13, 4263–4274, https://doi.org/10.5194/essd-13-4263-2021, https://doi.org/10.5194/essd-13-4263-2021, 2021
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Roots play a key role in our Earth system. Here we combine 10 307 field measurements of forest root biomass worldwide with global observations of forest structure, climatic conditions, topography, land management and soil characteristics to derive a spatially explicit global high-resolution (~ 1 km) root biomass dataset. In total, 142 ± 25 (95 % CI) Pg of live dry-matter biomass is stored belowground, representing a global average root : shoot biomass ratio of 0.25 ± 0.10.
Sebastian Doetterl, Rodrigue K. Asifiwe, Geert Baert, Fernando Bamba, Marijn Bauters, Pascal Boeckx, Benjamin Bukombe, Georg Cadisch, Matthew Cooper, Landry N. Cizungu, Alison Hoyt, Clovis Kabaseke, Karsten Kalbitz, Laurent Kidinda, Annina Maier, Moritz Mainka, Julia Mayrock, Daniel Muhindo, Basile B. Mujinya, Serge M. Mukotanyi, Leon Nabahungu, Mario Reichenbach, Boris Rewald, Johan Six, Anna Stegmann, Laura Summerauer, Robin Unseld, Bernard Vanlauwe, Kristof Van Oost, Kris Verheyen, Cordula Vogel, Florian Wilken, and Peter Fiener
Earth Syst. Sci. Data, 13, 4133–4153, https://doi.org/10.5194/essd-13-4133-2021, https://doi.org/10.5194/essd-13-4133-2021, 2021
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The African Tropics are hotspots of modern-day land use change and are of great relevance for the global carbon cycle. Here, we present data collected as part of the DFG-funded project TropSOC along topographic, land use, and geochemical gradients in the eastern Congo Basin and the Albertine Rift. Our database contains spatial and temporal data on soil, vegetation, environmental properties, and land management collected from 136 pristine tropical forest and cropland plots between 2017 and 2020.
Maurizio Santoro, Oliver Cartus, Nuno Carvalhais, Danaë M. A. Rozendaal, Valerio Avitabile, Arnan Araza, Sytze de Bruin, Martin Herold, Shaun Quegan, Pedro Rodríguez-Veiga, Heiko Balzter, João Carreiras, Dmitry Schepaschenko, Mikhail Korets, Masanobu Shimada, Takuya Itoh, Álvaro Moreno Martínez, Jura Cavlovic, Roberto Cazzolla Gatti, Polyanna da Conceição Bispo, Nasheta Dewnath, Nicolas Labrière, Jingjing Liang, Jeremy Lindsell, Edward T. A. Mitchard, Alexandra Morel, Ana Maria Pacheco Pascagaza, Casey M. Ryan, Ferry Slik, Gaia Vaglio Laurin, Hans Verbeeck, Arief Wijaya, and Simon Willcock
Earth Syst. Sci. Data, 13, 3927–3950, https://doi.org/10.5194/essd-13-3927-2021, https://doi.org/10.5194/essd-13-3927-2021, 2021
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Forests play a crucial role in Earth’s carbon cycle. To understand the carbon cycle better, we generated a global dataset of forest above-ground biomass, i.e. carbon stocks, from satellite data of 2010. This dataset provides a comprehensive and detailed portrait of the distribution of carbon in forests, although for dense forests in the tropics values are somewhat underestimated. This dataset will have a considerable impact on climate, carbon, and socio-economic modelling schemes.
Kyle B. Delwiche, Sara Helen Knox, Avni Malhotra, Etienne Fluet-Chouinard, Gavin McNicol, Sarah Feron, Zutao Ouyang, Dario Papale, Carlo Trotta, Eleonora Canfora, You-Wei Cheah, Danielle Christianson, Ma. Carmelita R. Alberto, Pavel Alekseychik, Mika Aurela, Dennis Baldocchi, Sheel Bansal, David P. Billesbach, Gil Bohrer, Rosvel Bracho, Nina Buchmann, David I. Campbell, Gerardo Celis, Jiquan Chen, Weinan Chen, Housen Chu, Higo J. Dalmagro, Sigrid Dengel, Ankur R. Desai, Matteo Detto, Han Dolman, Elke Eichelmann, Eugenie Euskirchen, Daniela Famulari, Kathrin Fuchs, Mathias Goeckede, Sébastien Gogo, Mangaliso J. Gondwe, Jordan P. Goodrich, Pia Gottschalk, Scott L. Graham, Martin Heimann, Manuel Helbig, Carole Helfter, Kyle S. Hemes, Takashi Hirano, David Hollinger, Lukas Hörtnagl, Hiroki Iwata, Adrien Jacotot, Gerald Jurasinski, Minseok Kang, Kuno Kasak, John King, Janina Klatt, Franziska Koebsch, Ken W. Krauss, Derrick Y. F. Lai, Annalea Lohila, Ivan Mammarella, Luca Belelli Marchesini, Giovanni Manca, Jaclyn Hatala Matthes, Trofim Maximov, Lutz Merbold, Bhaskar Mitra, Timothy H. Morin, Eiko Nemitz, Mats B. Nilsson, Shuli Niu, Walter C. Oechel, Patricia Y. Oikawa, Keisuke Ono, Matthias Peichl, Olli Peltola, Michele L. Reba, Andrew D. Richardson, William Riley, Benjamin R. K. Runkle, Youngryel Ryu, Torsten Sachs, Ayaka Sakabe, Camilo Rey Sanchez, Edward A. Schuur, Karina V. R. Schäfer, Oliver Sonnentag, Jed P. Sparks, Ellen Stuart-Haëntjens, Cove Sturtevant, Ryan C. Sullivan, Daphne J. Szutu, Jonathan E. Thom, Margaret S. Torn, Eeva-Stiina Tuittila, Jessica Turner, Masahito Ueyama, Alex C. Valach, Rodrigo Vargas, Andrej Varlagin, Alma Vazquez-Lule, Joseph G. Verfaillie, Timo Vesala, George L. Vourlitis, Eric J. Ward, Christian Wille, Georg Wohlfahrt, Guan Xhuan Wong, Zhen Zhang, Donatella Zona, Lisamarie Windham-Myers, Benjamin Poulter, and Robert B. Jackson
Earth Syst. Sci. Data, 13, 3607–3689, https://doi.org/10.5194/essd-13-3607-2021, https://doi.org/10.5194/essd-13-3607-2021, 2021
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Methane is an important greenhouse gas, yet we lack knowledge about its global emissions and drivers. We present FLUXNET-CH4, a new global collection of methane measurements and a critical resource for the research community. We use FLUXNET-CH4 data to quantify the seasonality of methane emissions from freshwater wetlands, finding that methane seasonality varies strongly with latitude. Our new database and analysis will improve wetland model accuracy and inform greenhouse gas budgets.
Frans-Jan W. Parmentier, Lennart Nilsen, Hans Tømmervik, and Elisabeth J. Cooper
Earth Syst. Sci. Data, 13, 3593–3606, https://doi.org/10.5194/essd-13-3593-2021, https://doi.org/10.5194/essd-13-3593-2021, 2021
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Satellites provide a global overview of Earth's ecosystems, but they have coarse resolutions and low revisit times. Small-scale vegetation patterns and sudden shifts in plant growth can easily be missed. In this paper, we show how to fill these gaps with vegetation indices obtained with ordinary time-lapse cameras deployed across a valley on Svalbard. We show how to adjust for unwanted camera movement and that vegetation indices from ordinary cameras compare well to those used by satellites.
Rafael Poyatos, Víctor Granda, Víctor Flo, Mark A. Adams, Balázs Adorján, David Aguadé, Marcos P. M. Aidar, Scott Allen, M. Susana Alvarado-Barrientos, Kristina J. Anderson-Teixeira, Luiza Maria Aparecido, M. Altaf Arain, Ismael Aranda, Heidi Asbjornsen, Robert Baxter, Eric Beamesderfer, Z. Carter Berry, Daniel Berveiller, Bethany Blakely, Johnny Boggs, Gil Bohrer, Paul V. Bolstad, Damien Bonal, Rosvel Bracho, Patricia Brito, Jason Brodeur, Fernando Casanoves, Jérôme Chave, Hui Chen, Cesar Cisneros, Kenneth Clark, Edoardo Cremonese, Hongzhong Dang, Jorge S. David, Teresa S. David, Nicolas Delpierre, Ankur R. Desai, Frederic C. Do, Michal Dohnal, Jean-Christophe Domec, Sebinasi Dzikiti, Colin Edgar, Rebekka Eichstaedt, Tarek S. El-Madany, Jan Elbers, Cleiton B. Eller, Eugénie S. Euskirchen, Brent Ewers, Patrick Fonti, Alicia Forner, David I. Forrester, Helber C. Freitas, Marta Galvagno, Omar Garcia-Tejera, Chandra Prasad Ghimire, Teresa E. Gimeno, John Grace, André Granier, Anne Griebel, Yan Guangyu, Mark B. Gush, Paul J. Hanson, Niles J. Hasselquist, Ingo Heinrich, Virginia Hernandez-Santana, Valentine Herrmann, Teemu Hölttä, Friso Holwerda, James Irvine, Supat Isarangkool Na Ayutthaya, Paul G. Jarvis, Hubert Jochheim, Carlos A. Joly, Julia Kaplick, Hyun Seok Kim, Leif Klemedtsson, Heather Kropp, Fredrik Lagergren, Patrick Lane, Petra Lang, Andrei Lapenas, Víctor Lechuga, Minsu Lee, Christoph Leuschner, Jean-Marc Limousin, Juan Carlos Linares, Maj-Lena Linderson, Anders Lindroth, Pilar Llorens, Álvaro López-Bernal, Michael M. Loranty, Dietmar Lüttschwager, Cate Macinnis-Ng, Isabelle Maréchaux, Timothy A. Martin, Ashley Matheny, Nate McDowell, Sean McMahon, Patrick Meir, Ilona Mészáros, Mirco Migliavacca, Patrick Mitchell, Meelis Mölder, Leonardo Montagnani, Georgianne W. Moore, Ryogo Nakada, Furong Niu, Rachael H. Nolan, Richard Norby, Kimberly Novick, Walter Oberhuber, Nikolaus Obojes, A. Christopher Oishi, Rafael S. Oliveira, Ram Oren, Jean-Marc Ourcival, Teemu Paljakka, Oscar Perez-Priego, Pablo L. Peri, Richard L. Peters, Sebastian Pfautsch, William T. Pockman, Yakir Preisler, Katherine Rascher, George Robinson, Humberto Rocha, Alain Rocheteau, Alexander Röll, Bruno H. P. Rosado, Lucy Rowland, Alexey V. Rubtsov, Santiago Sabaté, Yann Salmon, Roberto L. Salomón, Elisenda Sánchez-Costa, Karina V. R. Schäfer, Bernhard Schuldt, Alexandr Shashkin, Clément Stahl, Marko Stojanović, Juan Carlos Suárez, Ge Sun, Justyna Szatniewska, Fyodor Tatarinov, Miroslav Tesař, Frank M. Thomas, Pantana Tor-ngern, Josef Urban, Fernando Valladares, Christiaan van der Tol, Ilja van Meerveld, Andrej Varlagin, Holm Voigt, Jeffrey Warren, Christiane Werner, Willy Werner, Gerhard Wieser, Lisa Wingate, Stan Wullschleger, Koong Yi, Roman Zweifel, Kathy Steppe, Maurizio Mencuccini, and Jordi Martínez-Vilalta
Earth Syst. Sci. Data, 13, 2607–2649, https://doi.org/10.5194/essd-13-2607-2021, https://doi.org/10.5194/essd-13-2607-2021, 2021
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Transpiration is a key component of global water balance, but it is poorly constrained from available observations. We present SAPFLUXNET, the first global database of tree-level transpiration from sap flow measurements, containing 202 datasets and covering a wide range of ecological conditions. SAPFLUXNET and its accompanying R software package
sapfluxnetrwill facilitate new data syntheses on the ecological factors driving water use and drought responses of trees and forests.
Tessa Sophia van der Voort, Thomas Michael Blattmann, Muhammed Usman, Daniel Montluçon, Thomas Loeffler, Maria Luisa Tavagna, Nicolas Gruber, and Timothy Ian Eglinton
Earth Syst. Sci. Data, 13, 2135–2146, https://doi.org/10.5194/essd-13-2135-2021, https://doi.org/10.5194/essd-13-2135-2021, 2021
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Ocean sediments form the largest and longest-term storage of organic carbon. Despite their global importance, information on these sediments is often scattered, incomplete or inaccessible. Here we present MOSAIC (Modern Ocean Sediment Archive and Inventory of Carbon, mosaic.ethz.ch), a (radio)carbon-centric database that addresses this information gap. This database provides a platform for assessing the transport, deposition and storage of carbon in ocean surface sediments.
Zhen Zhang, Etienne Fluet-Chouinard, Katherine Jensen, Kyle McDonald, Gustaf Hugelius, Thomas Gumbricht, Mark Carroll, Catherine Prigent, Annett Bartsch, and Benjamin Poulter
Earth Syst. Sci. Data, 13, 2001–2023, https://doi.org/10.5194/essd-13-2001-2021, https://doi.org/10.5194/essd-13-2001-2021, 2021
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The spatiotemporal distribution of wetlands is one of the important and yet uncertain factors determining the time and locations of methane fluxes. The Wetland Area and Dynamics for Methane Modeling (WAD2M) dataset describes the global data product used to quantify the areal dynamics of natural wetlands and how global wetlands are changing in response to climate.
Esteban Alonso-González and Víctor Fernández-García
Earth Syst. Sci. Data, 13, 1925–1938, https://doi.org/10.5194/essd-13-1925-2021, https://doi.org/10.5194/essd-13-1925-2021, 2021
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We present the first global burn severity database (MOSEV database), which is based on Moderate Resolution Imaging Spectroradiometer (MODIS) surface reflectance and burned area products. The database inludes monthly scenes with the dNBR, RdNBR and post-burn NBR spectral indices at 500 m spatial resolution from November 2000 onwards. Moreover, in this work we show that there is a close relationship between the burn severity metrics included in MOSEV and the same ones obtained from Landsat-8.
William R. Wieder, Derek Pierson, Stevan Earl, Kate Lajtha, Sara G. Baer, Ford Ballantyne, Asmeret Asefaw Berhe, Sharon A. Billings, Laurel M. Brigham, Stephany S. Chacon, Jennifer Fraterrigo, Serita D. Frey, Katerina Georgiou, Marie-Anne de Graaff, A. Stuart Grandy, Melannie D. Hartman, Sarah E. Hobbie, Chris Johnson, Jason Kaye, Emily Kyker-Snowman, Marcy E. Litvak, Michelle C. Mack, Avni Malhotra, Jessica A. M. Moore, Knute Nadelhoffer, Craig Rasmussen, Whendee L. Silver, Benjamin N. Sulman, Xanthe Walker, and Samantha Weintraub
Earth Syst. Sci. Data, 13, 1843–1854, https://doi.org/10.5194/essd-13-1843-2021, https://doi.org/10.5194/essd-13-1843-2021, 2021
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Data collected from research networks present opportunities to test theories and develop models about factors responsible for the long-term persistence and vulnerability of soil organic matter (SOM). Here we present the SOils DAta Harmonization database (SoDaH), a flexible database designed to harmonize diverse SOM datasets from multiple research networks.
Mario Guevara, Michela Taufer, and Rodrigo Vargas
Earth Syst. Sci. Data, 13, 1711–1735, https://doi.org/10.5194/essd-13-1711-2021, https://doi.org/10.5194/essd-13-1711-2021, 2021
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Soil moisture is key for understanding soil–plant–atmosphere interactions. We provide a machine learning approach to increase the spatial resolution of satellite-derived soil moisture information. The outcome is a dataset of gap-free global mean annual soil moisture predictions and associated uncertainty for 28 years (1991–2018) across 15 km grids. This dataset has higher agreement with in situ soil moisture and precipitation measurements. Results show a decline of global annual soil moisture.
Francesco N. Tubiello, Giulia Conchedda, Nathan Wanner, Sandro Federici, Simone Rossi, and Giacomo Grassi
Earth Syst. Sci. Data, 13, 1681–1691, https://doi.org/10.5194/essd-13-1681-2021, https://doi.org/10.5194/essd-13-1681-2021, 2021
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This paper presents the first estimates of forest carbon fluxes (1990–2020) based on the new Global Forest Resources Assessment (FRA) 2020. We document for the first time in the literature forest carbon fluxes for the last decade 2011–2020. Results show that carbon losses from net forest conversion (3.1 billion tonnes of CO2) were counterbalanced by carbon gains on forest land (−3.3 billion tonnes of CO2), resulting in the world's forests acting overall as a small carbon sink in the past decade.
Linqing Yang and Asko Noormets
Earth Syst. Sci. Data, 13, 1461–1475, https://doi.org/10.5194/essd-13-1461-2021, https://doi.org/10.5194/essd-13-1461-2021, 2021
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We present a flux seasonality metrics database (FSMD) depicting a set of standardized metrics of ecosystem biogeochemical fluxes of CO2, water, and energy, including transition dates, phase lengths, and rates of change with uncertainty estimates. FSMD allows assessment of spatial and temporal patterns in developmental dynamics, validation of novel aspects of phenology product, and process models. It is calculated from FLUXNET2015 data product and will be updated with new FLUXNET data releases.
Raphaël d'Andrimont, Astrid Verhegghen, Michele Meroni, Guido Lemoine, Peter Strobl, Beatrice Eiselt, Momchil Yordanov, Laura Martinez-Sanchez, and Marijn van der Velde
Earth Syst. Sci. Data, 13, 1119–1133, https://doi.org/10.5194/essd-13-1119-2021, https://doi.org/10.5194/essd-13-1119-2021, 2021
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The Land Use/Cover Area frame Survey (LUCAS) is a regular in situ land cover and land use ground survey exercise that extends over the whole of the European Union. A new LUCAS module specifically tailored to Earth observation was introduced in 2018: the LUCAS Copernicus module. This paper summarizes the LUCAS Copernicus survey and provides the unique resulting data: 58 426 polygons with level-3 land cover (66 specific classes including crop type) and land use (38 classes).
Jeff W. Atkins, Elizabeth Agee, Alexandra Barry, Kyla M. Dahlin, Kalyn Dorheim, Maxim S. Grigri, Lisa T. Haber, Laura J. Hickey, Aaron G. Kamoske, Kayla Mathes, Catherine McGuigan, Evan Paris, Stephanie C. Pennington, Carly Rodriguez, Autym Shafer, Alexey Shiklomanov, Jason Tallant, Christopher M. Gough, and Ben Bond-Lamberty
Earth Syst. Sci. Data, 13, 943–952, https://doi.org/10.5194/essd-13-943-2021, https://doi.org/10.5194/essd-13-943-2021, 2021
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The fortedata R package is an open data notebook from the Forest Resilience Threshold Experiment (FoRTE) – a modeling and manipulative field experiment that tests the effects of disturbance severity and disturbance type on carbon cycling dynamics in a temperate forest. The data included help to interpret how carbon cycling processes respond over time to disturbance.
Autun Purser, Simon Dreutter, Huw Griffiths, Laura Hehemann, Kerstin Jerosch, Axel Nordhausen, Dieter Piepenburg, Claudio Richter, Henning Schröder, and Boris Dorschel
Earth Syst. Sci. Data, 13, 609–615, https://doi.org/10.5194/essd-13-609-2021, https://doi.org/10.5194/essd-13-609-2021, 2021
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This dataset comprises 26-megapixel seafloor images collected from below ice and steeply sloped regions of the Southern Ocean (the western Weddell Sea; the Powell Basin; and the rapidly shallowing, iceberg-scoured Nachtigaller Shoal). These data were collected with the Ocean Floor Observation and Bathymetry System (OFOBS), an advanced towed camera platform incorporating various sonar devices to aid in hazard avoidance and seafloor mapping, for use in challenging, high-relief seafloor areas.
Zihao Bian, Hanqin Tian, Qichun Yang, Rongting Xu, Shufen Pan, and Bowen Zhang
Earth Syst. Sci. Data, 13, 515–527, https://doi.org/10.5194/essd-13-515-2021, https://doi.org/10.5194/essd-13-515-2021, 2021
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The estimation of manure nutrient production and application is critical for the efficient use of manure nutrients. This study developed four manure nitrogen and phosphorus datasets with high spatial resolution and a long time period (1860–2017) in the US. The datasets can provide useful information for stakeholders and scientists who focus on agriculture, nutrient budget, and biogeochemical cycle.
Zhan Hu, Pim W. J. M. Willemsen, Bas W. Borsje, Chen Wang, Heng Wang, Daphne van der Wal, Zhenchang Zhu, Bas Oteman, Vincent Vuik, Ben Evans, Iris Möller, Jean-Philippe Belliard, Alexander Van Braeckel, Stijn Temmerman, and Tjeerd J. Bouma
Earth Syst. Sci. Data, 13, 405–416, https://doi.org/10.5194/essd-13-405-2021, https://doi.org/10.5194/essd-13-405-2021, 2021
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Erosion and accretion processes govern the ecogeomorphic evolution of intertidal (salt marsh and tidal flat) ecosystems and hence substantially affect their valuable ecosystem services. By applying a novel sensor, we obtained unique high-resolution daily bed-level change datasets from 10 marsh–mudflat sites in northwestern Europe. This dataset has revealed diverse spatial bed-level change patterns over daily to seasonal scales, which are valuable to theoretical and model development.
Junjie Liu, Latha Baskaran, Kevin Bowman, David Schimel, A. Anthony Bloom, Nicholas C. Parazoo, Tomohiro Oda, Dustin Carroll, Dimitris Menemenlis, Joanna Joiner, Roisin Commane, Bruce Daube, Lucianna V. Gatti, Kathryn McKain, John Miller, Britton B. Stephens, Colm Sweeney, and Steven Wofsy
Earth Syst. Sci. Data, 13, 299–330, https://doi.org/10.5194/essd-13-299-2021, https://doi.org/10.5194/essd-13-299-2021, 2021
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On average, the terrestrial biosphere carbon sink is equivalent to ~ 20 % of fossil fuel emissions. Understanding where and why the terrestrial biosphere absorbs carbon from the atmosphere is pivotal to any mitigation policy. Here we present a regionally resolved satellite-constrained net biosphere exchange (NBE) dataset with corresponding uncertainties between 2010–2018: CMS-Flux NBE 2020. The dataset provides a unique perspective on monitoring regional contributions to the CO2 growth rate.
Chongya Jiang, Kaiyu Guan, Genghong Wu, Bin Peng, and Sheng Wang
Earth Syst. Sci. Data, 13, 281–298, https://doi.org/10.5194/essd-13-281-2021, https://doi.org/10.5194/essd-13-281-2021, 2021
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Photosynthesis, quantified by gross primary production (GPP), is a key Earth system process. To date, there is a lack of a high-spatiotemporal-resolution, real-time and observation-based GPP dataset. This work addresses this gap by developing a SatelLite Only Photosynthesis Estimation (SLOPE) model and generating a new GPP product, which is advanced in spatial and temporal resolutions, instantaneity, and quantitative uncertainty. The dataset will benefit a range of research and applications.
Andrey N. Shikhov, Alexander V. Chernokulsky, Igor O. Azhigov, and Anastasia V. Semakina
Earth Syst. Sci. Data, 12, 3489–3513, https://doi.org/10.5194/essd-12-3489-2020, https://doi.org/10.5194/essd-12-3489-2020, 2020
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Severe winds are among the main causes of forest disturbances in Russia. However, compared to other European countries, windthrows in Russian forests remain substantially understudied. In this study, we compiled a new spatial database of stand-replacing (total) windthrows in the forest zone of European Russia for 1986–2017. Windthrows were delineated mainly with Landsat images. The total area of windthrows was estimated to be 2966 km2 (0.19 % of the total forest-covered area).
Giulia Conchedda and Francesco N. Tubiello
Earth Syst. Sci. Data, 12, 3113–3137, https://doi.org/10.5194/essd-12-3113-2020, https://doi.org/10.5194/essd-12-3113-2020, 2020
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This paper describes the FAO methodology used to globally assess areas of drained organic soils and peatlands due to agriculture over the period 1990–2019. We overlay geospatial information of soil type, land cover, agro-climatic zones, livestock distribution and IPCC coefficients, then aggregate it at national level for over 200 countries and territories. Results are compared to inventory data reported to UNFCCC, showing good agreement between the FAO estimates and country data.
Catherine L. Barnett, Nicholas A. Beresford, Michael D. Wood, Maria Izquierdo, Lee A. Walker, and Ross Fawkes
Earth Syst. Sci. Data, 12, 3021–3038, https://doi.org/10.5194/essd-12-3021-2020, https://doi.org/10.5194/essd-12-3021-2020, 2020
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This paper describes data from a study conducted in 2015–2016 to sample terrestrial wildlife, soil and water from two forests in north-eastern England. Sampling was targeted towards species representative of the International Commission on Radiological Protection’s (ICRP) terrestrial Reference Animals and Plants (RAPs): Wild Grass, Pine Tree, Earthworm, Bee, Rat, Deer and Frog. The dataset comprises stable-element and radionuclide activity concentrations.
Tim G. Reichenau, Wolfgang Korres, Marius Schmidt, Alexander Graf, Gerhard Welp, Nele Meyer, Anja Stadler, Cosimo Brogi, and Karl Schneider
Earth Syst. Sci. Data, 12, 2333–2364, https://doi.org/10.5194/essd-12-2333-2020, https://doi.org/10.5194/essd-12-2333-2020, 2020
Christina Schädel, Jeffrey Beem-Miller, Mina Aziz Rad, Susan E. Crow, Caitlin E. Hicks Pries, Jessica Ernakovich, Alison M. Hoyt, Alain Plante, Shane Stoner, Claire C. Treat, and Carlos A. Sierra
Earth Syst. Sci. Data, 12, 1511–1524, https://doi.org/10.5194/essd-12-1511-2020, https://doi.org/10.5194/essd-12-1511-2020, 2020
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Carbon loss to the atmosphere via microbial decomposition is often assessed by laboratory soil incubation studies that measure greenhouse gases released from soils under controlled conditions. Here, we introduce the Soil Incubation Database (SIDb) version 1.0, a compilation of time series data from incubations, structured into a new, publicly available, open-access database of carbon dioxide and methane flux. We also provide guidance for database entry and the required variables.
Christopher P. O. Reyer, Ramiro Silveyra Gonzalez, Klara Dolos, Florian Hartig, Ylva Hauf, Matthias Noack, Petra Lasch-Born, Thomas Rötzer, Hans Pretzsch, Henning Meesenburg, Stefan Fleck, Markus Wagner, Andreas Bolte, Tanja G. M. Sanders, Pasi Kolari, Annikki Mäkelä, Timo Vesala, Ivan Mammarella, Jukka Pumpanen, Alessio Collalti, Carlo Trotta, Giorgio Matteucci, Ettore D'Andrea, Lenka Foltýnová, Jan Krejza, Andreas Ibrom, Kim Pilegaard, Denis Loustau, Jean-Marc Bonnefond, Paul Berbigier, Delphine Picart, Sébastien Lafont, Michael Dietze, David Cameron, Massimo Vieno, Hanqin Tian, Alicia Palacios-Orueta, Victor Cicuendez, Laura Recuero, Klaus Wiese, Matthias Büchner, Stefan Lange, Jan Volkholz, Hyungjun Kim, Joanna A. Horemans, Friedrich Bohn, Jörg Steinkamp, Alexander Chikalanov, Graham P. Weedon, Justin Sheffield, Flurin Babst, Iliusi Vega del Valle, Felicitas Suckow, Simon Martel, Mats Mahnken, Martin Gutsch, and Katja Frieler
Earth Syst. Sci. Data, 12, 1295–1320, https://doi.org/10.5194/essd-12-1295-2020, https://doi.org/10.5194/essd-12-1295-2020, 2020
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Process-based vegetation models are widely used to predict local and global ecosystem dynamics and climate change impacts. Due to their complexity, they require careful parameterization and evaluation to ensure that projections are accurate and reliable. The PROFOUND Database provides a wide range of empirical data to calibrate and evaluate vegetation models that simulate climate impacts at the forest stand scale to support systematic model intercomparisons and model development in Europe.
Gregory Duveiller, Federico Filipponi, Sophia Walther, Philipp Köhler, Christian Frankenberg, Luis Guanter, and Alessandro Cescatti
Earth Syst. Sci. Data, 12, 1101–1116, https://doi.org/10.5194/essd-12-1101-2020, https://doi.org/10.5194/essd-12-1101-2020, 2020
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Sun-induced chlorophyll fluorescence is a valuable indicator of vegetation productivity, but our capacity to measure it from space using satellite remote techniques has been hampered by a lack of spatial detail. Based on prior knowledge of how ecosystems should respond to growing conditions in some modelling along with ancillary satellite observations, we provide here a new enhanced dataset with higher spatial resolution that better represents the spatial patterns of vegetation growth over land.
Xiaolu Tang, Shaohui Fan, Manyi Du, Wenjie Zhang, Sicong Gao, Shibin Liu, Guo Chen, Zhen Yu, and Wunian Yang
Earth Syst. Sci. Data, 12, 1037–1051, https://doi.org/10.5194/essd-12-1037-2020, https://doi.org/10.5194/essd-12-1037-2020, 2020
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Global soil heterotrophic respiration (RH) was modelled using Random Forest by linking published observations and globally gridded environmental variables. Globally, RH increased from 55.8 to 58.3 Pg C a−1 with an increasing trend of 0.036 ± 0.007 Pg C a−2 and an annual mean RH of 57.2 ± 0.6 Pg C a−1 over 1980–2016. The developed RH dataset has great potential to serve as a benchmark to constrain global vegetation models.
David Chandler and Shona Mackie
Earth Syst. Sci. Data, 12, 897–906, https://doi.org/10.5194/essd-12-897-2020, https://doi.org/10.5194/essd-12-897-2020, 2020
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The activity of microorganisms at the bottom of the marine food chain has rarely been measured under sea ice in winter. We present the first observations of Arctic winter microbial activity under sea ice in a west Greenland fjord. By measuring changes in the oxygen concentration of seawater under the ice, we found low but significant levels of activity, suggesting these microbial communities may constitute an important part of the winter marine ecosystem.
Wei Li, Philippe Ciais, Elke Stehfest, Detlef van Vuuren, Alexander Popp, Almut Arneth, Fulvio Di Fulvio, Jonathan Doelman, Florian Humpenöder, Anna B. Harper, Taejin Park, David Makowski, Petr Havlik, Michael Obersteiner, Jingmeng Wang, Andreas Krause, and Wenfeng Liu
Earth Syst. Sci. Data, 12, 789–804, https://doi.org/10.5194/essd-12-789-2020, https://doi.org/10.5194/essd-12-789-2020, 2020
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We generated spatially explicit bioenergy crop yields based on field measurements with climate, soil condition and remote-sensing variables as explanatory variables and the machine-learning method. We further compared our yield maps with the maps from three integrated assessment models (IAMs; IMAGE, MAgPIE and GLOBIOM) and found that the median yields in our maps are > 50 % higher than those in the IAM maps.
Giovanni Forzieri, Matteo Pecchi, Marco Girardello, Achille Mauri, Marcus Klaus, Christo Nikolov, Marius Rüetschi, Barry Gardiner, Julián Tomaštík, David Small, Constantin Nistor, Donatas Jonikavicius, Jonathan Spinoni, Luc Feyen, Francesca Giannetti, Rinaldo Comino, Alessandro Wolynski, Francesco Pirotti, Fabio Maistrelli, Ionut Savulescu, Stéphanie Wurpillot-Lucas, Stefan Karlsson, Karolina Zieba-Kulawik, Paulina Strejczek-Jazwinska, Martin Mokroš, Stefan Franz, Lukas Krejci, Ionel Haidu, Mats Nilsson, Piotr Wezyk, Filippo Catani, Yi-Ying Chen, Sebastiaan Luyssaert, Gherardo Chirici, Alessandro Cescatti, and Pieter S. A. Beck
Earth Syst. Sci. Data, 12, 257–276, https://doi.org/10.5194/essd-12-257-2020, https://doi.org/10.5194/essd-12-257-2020, 2020
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Strong winds may uproot and break trees and represent a risk for forests. Despite the importance of this natural disturbance and possible intensification in view of climate change, spatial information about wind-related impacts is currently missing on a pan-European scale. We present a new database of wind disturbances in European forests comprised of more than 80 000 records over the period 2000–2018. Our database is a unique spatial source for the study of forest disturbances at large scales.
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Short summary
The turnover time of terrestrial carbon (τ) controls the global carbon cycle–climate feedback. In this study, we provide a new, updated ensemble of diagnostic terrestrial carbon turnover times and associated uncertainties on a global scale. Despite the large variation in both magnitude and spatial patterns of τ, we identified robust features in the spatial patterns of τ which could contribute to uncertainty reductions in future projections of the carbon cycle–climate feedback.
The turnover time of terrestrial carbon (τ) controls the global carbon cycle–climate feedback....