Articles | Volume 15, issue 1
https://doi.org/10.5194/essd-15-41-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/essd-15-41-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Data description paper
| 
03 Jan 2023
Data description paper |
| 03 Jan 2023
| 03 Jan 2023
A novel specimen-based mid-Paleozoic dataset of antiarch placoderms (the most basal jawed vertebrates)
Zhaohui Pan
Key CAS Laboratory of Vertebrate Evolution and Human Origins,
Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy
of Sciences (CAS), Beijing 100044, China
Zhibin Niu
College of Intelligence and Computing, Tianjin University, Tianjin 300350,
China
Zumin Xian
Institute of Palaeontology, Yunnan Key Laboratory of Earth System
Science, Yunnan University, Kunming 650500, China
Key CAS Laboratory of Vertebrate Evolution and Human Origins,
Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy
of Sciences (CAS), Beijing 100044, China
CAS Center for Excellence in Life and Paleoenvironment, Beijing 100044,
China
University of Chinese Academy of Sciences, Beijing 100049, China
Related authors
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Hong-He Xu, Zhi-Bin Niu, Yan-Sen Chen, Xuan Ma, Xiao-Jing Tong, Yi-Tong Sun, Xiao-Yan Dong, Dan-Ni Fan, Shuang-Shuang Song, Yan-Yan Zhu, Ning Yang, and Qing Xia
Earth Syst. Sci. Data, 15, 2213–2221, https://doi.org/10.5194/essd-15-2213-2023, https://doi.org/10.5194/essd-15-2213-2023, 2023
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A multi-dimensional and integrated dataset of fossil specimens is described. The dataset potentially contributes to a range of scientific activities and provides easy access to and virtual examination of fossil specimens in a convenient and low-cost way. It will greatly benefit paleontology in research, teaching, and science communication.
Yemao Hou, Mario Canul-Ku, Xindong Cui, Rogelio Hasimoto-Beltran, and Min Zhu
J. Micropalaeontol., 40, 163–173, https://doi.org/10.5194/jm-40-163-2021, https://doi.org/10.5194/jm-40-163-2021, 2021
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In this study, we constructed an open dataset, which contains computed tomography (CT) data on nearly 500 vertebrate microfossils. We propose a semantic segmentation method for CT fish microfossil data based on deep learning (DL). We expect that our proposed method could be applied to CT data on other fossils with good performance. We also believe the fast-accumulating CT data on vertebrate microfossils might become a source of information-rich datasets for deep learning.
Hong-He Xu, Zhi-Bin Niu, and Yan-Sen Chen
Earth Syst. Sci. Data, 12, 3443–3452, https://doi.org/10.5194/essd-12-3443-2020, https://doi.org/10.5194/essd-12-3443-2020, 2020
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We introduce here a comprehensive database of stratigraphy and palaeontology biodiversity, the Geobiodiversity Database (GBDB). The GBDB collects and provides a big volume of fossil and stratum record data and aims to be more widely used by geoscientists and contribute to better quantitative research on palaeontology and stratigraphy, and furthermore, to a deeper understanding of the evolution of life and of Earth's history.
Hong-He Xu, Zhi-Bin Niu, and Yan-Sen Chen
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2020-40, https://doi.org/10.5194/essd-2020-40, 2020
Preprint withdrawn
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We present the Geobiodiversity database (GBDB), a comprehensive stratigraphic and palaeontological database. It includes abundant geological records and contributes research on early Palaeozoic palaeogeography, tectonic and biodiversity evolution of China. Besides data collecting, processing and visualization, the team pays more attention to data analyzing with Artificial Intelligence. GBDB is to push forward the quantitative research of palaeontology and stratigraphy in the era of big data.
Related subject area
Domain: ESSD – Land | Subject: Geology and geochemistry
Subsurface geological and geophysical data from the Po Plain and the northern Adriatic Sea (north Italy)
The secret life of garnets: a comprehensive, standardized dataset of garnet geochemical analyses integrating localities and petrogenesis
HR-GLDD: a globally distributed dataset using generalized deep learning (DL) for rapid landslide mapping on high-resolution (HR) satellite imagery
IESDB – the Iberian Evaporite Structure Database
Spectral Library of European Pegmatites, Pegmatite Minerals and Pegmatite Host-Rocks – the GREENPEG project database
The ITAlian rainfall-induced LandslIdes CAtalogue, an extensive and accurate spatio-temporal catalogue of rainfall-induced landslides in Italy
Digital soil mapping of lithium in Australia
A multi-dimensional dataset of Ordovician to Silurian graptolite specimens for virtual examination, global correlation, and shale gas exploration
A strontium isoscape of northern Australia
Valgarður: a database of the petrophysical, mineralogical, and chemical properties of Icelandic rocks
A geodatabase of historical landslide events occurring in the highly urbanized volcanic area of Campi Flegrei, Italy
Pan-Arctic soil element bioavailability estimations
Geomorphological landslide inventory map of the Daunia Apennines, southern Italy
A database of radiogenic Sr–Nd isotopes at the “three poles”
MOdern River archivEs of Particulate Organic Carbon: MOREPOC
The Active Faults of Eurasia Database (AFEAD): the ontology and design behind the continental-scale dataset
A strontium isoscape of inland southeastern Australia
A new digital lithological map of Italy at the 1:100 000 scale for geomechanical modelling
Retrogressive thaw slumps along the Qinghai–Tibet Engineering Corridor: a comprehensive inventory and their distribution characteristics
OCTOPUS database (v.2)
A national landslide inventory for Denmark
Michele Livani, Lorenzo Petracchini, Christoforos Benetatos, Francesco Marzano, Andrea Billi, Eugenio Carminati, Carlo Doglioni, Patrizio Petricca, Roberta Maffucci, Giulia Codegone, Vera Rocca, Francesca Verga, and Ilaria Antoncecchi
Earth Syst. Sci. Data, 15, 4261–4293, https://doi.org/10.5194/essd-15-4261-2023, https://doi.org/10.5194/essd-15-4261-2023, 2023
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This paper presents subsurface geological and geophysical data from the Po Plain and the northern Adriatic Sea (north Italy). We collected and digitized data from 160 deep wells (including geophysical logs), 61 geological cross-sections, and 10 isobath maps. Furthermore, after a data accuracy analysis, we generated a simplified 3D geological model with several gridded surfaces separating units with different lithological properties. All data are available in delimited text files in ASCII format.
Kristen Chiama, Morgan Gabor, Isabella Lupini, Randolph Rutledge, Julia Ann Nord, Shuang Zhang, Asmaa Boujibar, Emma S. Bullock, Michael J. Walter, Kerstin Lehnert, Frank Spear, Shaunna M. Morrison, and Robert M. Hazen
Earth Syst. Sci. Data, 15, 4235–4259, https://doi.org/10.5194/essd-15-4235-2023, https://doi.org/10.5194/essd-15-4235-2023, 2023
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We compiled 95 650 garnet sample analyses from a variety of sources, ranging from large data repositories to peer-reviewed literature. Garnets are commonly used as indicators of geological formation environments and are an ideal subject for the creation of an extensive dataset incorporating composition, localities, formation, age, temperature, pressure, and geochemistry. This dataset is available in the Evolutionary System of Mineralogy Database and paves the way for future geochemical studies.
Sansar Raj Meena, Lorenzo Nava, Kushanav Bhuyan, Silvia Puliero, Lucas Pedrosa Soares, Helen Cristina Dias, Mario Floris, and Filippo Catani
Earth Syst. Sci. Data, 15, 3283–3298, https://doi.org/10.5194/essd-15-3283-2023, https://doi.org/10.5194/essd-15-3283-2023, 2023
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Landslides occur often across the world, with the potential to cause significant damage. Although a substantial amount of research has been conducted on the mapping of landslides using remote-sensing data, gaps and uncertainties remain when developing models to be operational at the global scale. To address this issue, we present the High-Resolution Global landslide Detector Database (HR-GLDD) for landslide mapping with landslide instances from 10 different physiographical regions globally.
Eloi González-Esvertit, Juan Alcalde, and Enrique Gomez-Rivas
Earth Syst. Sci. Data, 15, 3131–3145, https://doi.org/10.5194/essd-15-3131-2023, https://doi.org/10.5194/essd-15-3131-2023, 2023
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Evaporites are, scientifically and economically, key rocks due to their unique geological features and value for industrial purposes. To compile and normalise the vast amount of information of evaporite structures in the Iberian Peninsula, we present the IESDB – the first comprehensive database of evaporite structures and their surrounding rocks in Spain and Portugal. The IESDB is free to use, open access, and can be accessed and downloaded through the interactive IESDB webpage.
Joana Cardoso-Fernandes, Douglas Santos, Cátia Rodrigues de Almeida, Alexandre Lima, Ana C. Teodoro, and GREENPEG project team
Earth Syst. Sci. Data, 15, 3111–3129, https://doi.org/10.5194/essd-15-3111-2023, https://doi.org/10.5194/essd-15-3111-2023, 2023
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GREENPEG aims to develop tools for pegmatite exploration and to enhance European databases, adding new data on pegmatite properties, such as the spectral signature. Samples comprise pegmatites and wall rocks from Austria, Ireland, Norway, Portugal, and Spain. A detailed description of the spectral database is presented as well as reflectance spectra, photographs, and absorption features. Its European scale comprises pegmatites with distinct characteristics, providing a reference for exploration.
Silvia Peruccacci, Stefano Luigi Gariano, Massimo Melillo, Monica Solimano, Fausto Guzzetti, and Maria Teresa Brunetti
Earth Syst. Sci. Data, 15, 2863–2877, https://doi.org/10.5194/essd-15-2863-2023, https://doi.org/10.5194/essd-15-2863-2023, 2023
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ITALICA (ITAlian rainfall-induced LandslIdes CAtalogue) is the largest catalogue of rainfall-induced landslides accurately located in space and time available in Italy. ITALICA currently lists 6312 landslides that occurred between January 1996 and December 2021. The information was collected using strict objective and homogeneous criteria. The high spatial and temporal accuracy makes the catalogue suitable for reliably defining the rainfall conditions capable of triggering future landslides.
Wartini Ng, Budiman Minasny, Alex McBratney, Patrice de Caritat, and John Wilford
Earth Syst. Sci. Data, 15, 2465–2482, https://doi.org/10.5194/essd-15-2465-2023, https://doi.org/10.5194/essd-15-2465-2023, 2023
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With a higher demand for lithium (Li), a better understanding of its concentration and spatial distribution is important to delineate potential anomalous areas. This study uses a framework that combines data from recent geochemical surveys and relevant environmental factors to predict and map Li content across Australia. The map shows high Li concentration around existing mines and other potentially anomalous Li areas. The same mapping principles can potentially be applied to other elements.
Hong-He Xu, Zhi-Bin Niu, Yan-Sen Chen, Xuan Ma, Xiao-Jing Tong, Yi-Tong Sun, Xiao-Yan Dong, Dan-Ni Fan, Shuang-Shuang Song, Yan-Yan Zhu, Ning Yang, and Qing Xia
Earth Syst. Sci. Data, 15, 2213–2221, https://doi.org/10.5194/essd-15-2213-2023, https://doi.org/10.5194/essd-15-2213-2023, 2023
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A multi-dimensional and integrated dataset of fossil specimens is described. The dataset potentially contributes to a range of scientific activities and provides easy access to and virtual examination of fossil specimens in a convenient and low-cost way. It will greatly benefit paleontology in research, teaching, and science communication.
Patrice de Caritat, Anthony Dosseto, and Florian Dux
Earth Syst. Sci. Data, 15, 1655–1673, https://doi.org/10.5194/essd-15-1655-2023, https://doi.org/10.5194/essd-15-1655-2023, 2023
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This new, extensive (~1.5×106 km2) dataset from northern Australia contributes considerable new information on Australia's strontium (Sr) isotope coverage. The data are discussed in terms of lithology and age of the source areas. This dataset will reduce Northern Hemisphere bias in future global Sr isotope models. Other potential applications of the new data include mineral exploration, hydrology, food tracing, dust provenancing, and examining historic migrations of people and animals.
Samuel W. Scott, Léa Lévy, Cari Covell, Hjalti Franzson, Benoit Gibert, Ágúst Valfells, Juliet Newson, Julia Frolova, Egill Júlíusson, and María Sigríður Guðjónsdóttir
Earth Syst. Sci. Data, 15, 1165–1195, https://doi.org/10.5194/essd-15-1165-2023, https://doi.org/10.5194/essd-15-1165-2023, 2023
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Rock properties such as porosity and permeability play an important role in many geological processes. The Valgarður database is a compilation of petrophysical, geochemical, and mineralogical observations on more than 1000 Icelandic rock samples. In addition to helping constrain numerical models and geophysical inversions, these data can be used to better understand the interrelationship between lithology, hydrothermal alteration, and petrophysical properties.
Giuseppe Esposito and Fabio Matano
Earth Syst. Sci. Data, 15, 1133–1149, https://doi.org/10.5194/essd-15-1133-2023, https://doi.org/10.5194/essd-15-1133-2023, 2023
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In the highly urbanized volcanic area of Campi Flegrei (southern Italy), more than 500 000 people are exposed to multi-hazard conditions, including landslides. In the 1828–2017 time span, more than 2000 mass movements affected the volcanic slopes, concentrated mostly along the coastal sector. Rapid rock failures and flow-like landslides are frequent in the whole area. Besides their relevant role in modeling the landscape of Campi Flegrei, these processes also pose a societal risk.
Peter Stimmler, Mathias Goeckede, Bo Elberling, Susan Natali, Peter Kuhry, Nia Perron, Fabrice Lacroix, Gustaf Hugelius, Oliver Sonnentag, Jens Strauss, Christina Minions, Michael Sommer, and Jörg Schaller
Earth Syst. Sci. Data, 15, 1059–1075, https://doi.org/10.5194/essd-15-1059-2023, https://doi.org/10.5194/essd-15-1059-2023, 2023
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Arctic soils store large amounts of carbon and nutrients. The availability of nutrients, such as silicon, calcium, iron, aluminum, phosphorus, and amorphous silica, is crucial to understand future carbon fluxes in the Arctic. Here, we provide, for the first time, a unique dataset of the availability of the abovementioned nutrients for the different soil layers, including the currently frozen permafrost layer. We relate these data to several geographical and geological parameters.
Francesca Ardizzone, Francesco Bucci, Mauro Cardinali, Federica Fiorucci, Luca Pisano, Michele Santangelo, and Veronica Zumpano
Earth Syst. Sci. Data, 15, 753–767, https://doi.org/10.5194/essd-15-753-2023, https://doi.org/10.5194/essd-15-753-2023, 2023
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This paper presents a new geomorphological landslide inventory map for the Daunia Apennines, southern Italy. It was produced through the interpretation of two sets of stereoscopic aerial photographs, taken in 1954/55 and 2003, and targeted field checks. The inventory contains 17 437 landslides classified according to relative age, type of movement, and estimated depth. The dataset consists of a digital archive publicly available at https://doi.org/10.1594/PANGAEA.942427.
Zhiheng Du, Jiao Yang, Lei Wang, Ninglian Wang, Anders Svensson, Zhen Zhang, Xiangyu Ma, Yaping Liu, Shimeng Wang, Jianzhong Xu, and Cunde Xiao
Earth Syst. Sci. Data, 14, 5349–5365, https://doi.org/10.5194/essd-14-5349-2022, https://doi.org/10.5194/essd-14-5349-2022, 2022
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A dataset of the radiogenic strontium and neodymium isotopic compositions from the three poles (the third pole, the Arctic, and Antarctica) were integrated to obtain new findings. The dataset enables us to map the standardized locations in the three poles, while the use of sorting criteria related to the sample type permits us to trace the dust sources and sinks. The purpose of this dataset is to try to determine the variable transport pathways of dust at three poles.
Yutian Ke, Damien Calmels, Julien Bouchez, and Cécile Quantin
Earth Syst. Sci. Data, 14, 4743–4755, https://doi.org/10.5194/essd-14-4743-2022, https://doi.org/10.5194/essd-14-4743-2022, 2022
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In this paper, we introduce the largest and most comprehensive database for riverine particulate organic carbon carried by suspended particulate matter in Earth's fluvial systems: 3546 data entries for suspended particulate matter with detailed geochemical parameters are included, and special attention goes to the elemental and isotopic carbon compositions to better understand riverine particulate organic carbon and its role in the carbon cycle from regional to global scales.
Egor Zelenin, Dmitry Bachmanov, Sofya Garipova, Vladimir Trifonov, and Andrey Kozhurin
Earth Syst. Sci. Data, 14, 4489–4503, https://doi.org/10.5194/essd-14-4489-2022, https://doi.org/10.5194/essd-14-4489-2022, 2022
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Active faults are faults in the Earth's crust that could experience a possible future slip. A slip at the fault would cause an earthquake; thus, this draws particular attention to active faults in tectonic studies and seismic hazard assessment. We present the Active Faults of Eurasia Database (AFEAD): a high-detail continental-scale geodatabase comprising ~48 000 faults. The location, name, slip characteristics, and a reference to source publications are provided for database entries.
Patrice de Caritat, Anthony Dosseto, and Florian Dux
Earth Syst. Sci. Data, 14, 4271–4286, https://doi.org/10.5194/essd-14-4271-2022, https://doi.org/10.5194/essd-14-4271-2022, 2022
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Strontium isotopes are useful in geological, environmental, archaeological, and forensic research to constrain or identify the source of materials such as minerals, artefacts, or foodstuffs. A new dataset, contributing significant new data and knowledge to Australia’s strontium isotope coverage, is presented from an area of over 500 000 km2 of inland southeastern Australia. Various source areas for the sediments are recognized, and both fluvial and aeolian transport processes identified.
Francesco Bucci, Michele Santangelo, Lorenzo Fongo, Massimiliano Alvioli, Mauro Cardinali, Laura Melelli, and Ivan Marchesini
Earth Syst. Sci. Data, 14, 4129–4151, https://doi.org/10.5194/essd-14-4129-2022, https://doi.org/10.5194/essd-14-4129-2022, 2022
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The paper describes a new lithological map of Italy at a scale of 1 : 100 000 obtained from classification of a digital database following compositional and geomechanical criteria. The map represents the national distribution of the lithological classes at high resolution. The outcomes of this study can be relevant for a wide range of applications, including statistical and physically based modelling of slope stability assessment and other geoenvironmental studies.
Zhuoxuan Xia, Lingcao Huang, Chengyan Fan, Shichao Jia, Zhanjun Lin, Lin Liu, Jing Luo, Fujun Niu, and Tingjun Zhang
Earth Syst. Sci. Data, 14, 3875–3887, https://doi.org/10.5194/essd-14-3875-2022, https://doi.org/10.5194/essd-14-3875-2022, 2022
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Retrogressive thaw slumps are slope failures resulting from abrupt permafrost thaw, and are widely distributed along the Qinghai–Tibet Engineering Corridor. The potential damage to infrastructure and carbon emission of thaw slumps motivated us to obtain an inventory of thaw slumps. We used a semi-automatic method to map 875 thaw slumps, filling the knowledge gap of thaw slump locations and providing key benchmarks for analysing the distribution features and quantifying spatio-temporal changes.
Alexandru T. Codilean, Henry Munack, Wanchese M. Saktura, Tim J. Cohen, Zenobia Jacobs, Sean Ulm, Paul P. Hesse, Jakob Heyman, Katharina J. Peters, Alan N. Williams, Rosaria B. K. Saktura, Xue Rui, Kai Chishiro-Dennelly, and Adhish Panta
Earth Syst. Sci. Data, 14, 3695–3713, https://doi.org/10.5194/essd-14-3695-2022, https://doi.org/10.5194/essd-14-3695-2022, 2022
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OCTOPUS v.2 is a web-enabled database that allows users to visualise, query, and download cosmogenic radionuclide, luminescence, and radiocarbon ages and denudation rates associated with erosional landscapes, Quaternary depositional landforms, and archaeological records, along with ancillary geospatial data layers. OCTOPUS v.2 hosts five major data collections. Supporting data are comprehensive and include bibliographic, contextual, and sample-preparation- and measurement-related information.
Gregor Luetzenburg, Kristian Svennevig, Anders A. Bjørk, Marie Keiding, and Aart Kroon
Earth Syst. Sci. Data, 14, 3157–3165, https://doi.org/10.5194/essd-14-3157-2022, https://doi.org/10.5194/essd-14-3157-2022, 2022
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We produced the first landslide inventory for Denmark. Over 3200 landslides were mapped using a high-resolution elevation model and orthophotos. We implemented an independent validation into our mapping and found an overall level of completeness of 87 %. The national inventory represents a range of landslide sizes covering all regions that were covered by glacial ice during the last glacial period. This inventory will be used for investigating landslide causes and for natural hazard mitigation.
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Short summary
Antiarch placoderms, the most basal jawed vertebrates, have the potential to enlighten the origin of the last common ancestor of jawed vertebrates during the Paleozoic. This dataset, which was extracted manually from 142 published papers or books from 1939 to 2021, consists of 60 genera of 6025 specimens from the Ludfordian to the Famennian, covering all antiarch lineages. We transferred the unstructured data from the literature to structured data for further detailed research.
Antiarch placoderms, the most basal jawed vertebrates, have the potential to enlighten the...
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