Articles | Volume 13, issue 3
https://doi.org/10.5194/essd-13-943-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/essd-13-943-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Data description paper
| 
09 Mar 2021
Data description paper |
| 09 Mar 2021
| 09 Mar 2021
The fortedata R package: open-science datasets from a manipulative experiment testing forest resilience
Jeff W. Atkins
CORRESPONDING AUTHOR
Department of Biology, Virginia Commonwealth University, Richmond, VA
23059, USA
Elizabeth Agee
Environmental Sciences Division and Climate Change Science Institute,
Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
Alexandra Barry
Department of Biology, Virginia Commonwealth University, Richmond, VA
23059, USA
Kyla M. Dahlin
Department of Geography, Environment, and Spatial Sciences, Michigan
State University, East Lansing, MI 48824, USA
Kalyn Dorheim
Joint Global Change Research Institute at the University of Maryland,
Pacific Northwest National Laboratory, College Park, MD 20740, USA
Maxim S. Grigri
Department of Biology, Virginia Commonwealth University, Richmond, VA
23059, USA
Lisa T. Haber
Department of Biology, Virginia Commonwealth University, Richmond, VA
23059, USA
Laura J. Hickey
Department of Biology, Virginia Commonwealth University, Richmond, VA
23059, USA
Aaron G. Kamoske
Department of Geography, Environment, and Spatial Sciences, Michigan
State University, East Lansing, MI 48824, USA
Kayla Mathes
Department of Biology, Virginia Commonwealth University, Richmond, VA
23059, USA
Catherine McGuigan
Department of Biology, Virginia Commonwealth University, Richmond, VA
23059, USA
Evan Paris
Vassar College, Poughkeepsie, NY 12604, USA
Stephanie C. Pennington
Joint Global Change Research Institute at the University of Maryland,
Pacific Northwest National Laboratory, College Park, MD 20740, USA
Carly Rodriguez
Western Colorado University, Gunnison, CO 81231, USA
Autym Shafer
Department of Biology, Virginia Commonwealth University, Richmond, VA
23059, USA
Alexey Shiklomanov
NASA Goddard Space Flight Center, Greenbelt, MD 20771, USA
Jason Tallant
University of Michigan Biological Station, Pellston, MI 49769, USA
Christopher M. Gough
Department of Biology, Virginia Commonwealth University, Richmond, VA
23059, USA
Ben Bond-Lamberty
Joint Global Change Research Institute at the University of Maryland,
Pacific Northwest National Laboratory, College Park, MD 20740, USA
Related authors
No articles found.
Jacob A. Nelson, Sophia Walther, Fabian Gans, Basil Kraft, Ulrich Weber, Kimberly Novick, Nina Buchmann, Mirco Migliavacca, Georg Wohlfahrt, Ladislav Šigut, Andreas Ibrom, Dario Papale, Mathias Göckede, Gregory Duveiller, Alexander Knohl, Lukas Hörtnagl, Russell L. Scott, Weijie Zhang, Zayd Mahmoud Hamdi, Markus Reichstein, Sergio Aranda-Barranco, Jonas Ardö, Maarten Op de Beeck, Dave Billesbach, David Bowling, Rosvel Bracho, Christian Brümmer, Gustau Camps-Valls, Shiping Chen, Jamie Rose Cleverly, Ankur Desai, Gang Dong, Tarek S. El-Madany, Eugenie Susanne Euskirchen, Iris Feigenwinter, Marta Galvagno, Giacomo A. Gerosa, Bert Gielen, Ignacio Goded, Sarah Goslee, Christopher Michael Gough, Bernard Heinesch, Kazuhito Ichii, Marcin Antoni Jackowicz-Korczynski, Anne Klosterhalfen, Sara Knox, Hideki Kobayashi, Kukka-Maaria Kohonen, Mika Korkiakoski, Ivan Mammarella, Mana Gharun, Riccardo Marzuoli, Roser Matamala, Stefan Metzger, Leonardo Montagnani, Giacomo Nicolini, Thomas O'Halloran, Jean-Marc Ourcival, Matthias Peichl, Elise Pendall, Borja Ruiz Reverter, Marilyn Roland, Simone Sabbatini, Torsten Sachs, Marius Schmidt, Christopher R. Schwalm, Ankit Shekhar, Richard Silberstein, Maria Lucia Silveira, Donatella Spano, Torbern Tagesson, Gianluca Tramontana, Carlo Trotta, Fabio Turco, Timo Vesala, Caroline Vincke, Domenico Vitale, Enrique R. Vivoni, Yi Wang, William Woodgate, Enrico A. Yepez, Junhui Zhang, Donatella Zona, and Martin Jung
Biogeosciences, 21, 5079–5115, https://doi.org/10.5194/bg-21-5079-2024, https://doi.org/10.5194/bg-21-5079-2024, 2024
Short summary
Short summary
The movement of water, carbon, and energy from the Earth's surface to the atmosphere, or flux, is an important process to understand because it impacts our lives. Here, we outline a method called FLUXCOM-X to estimate global water and CO2 fluxes based on direct measurements from sites around the world. We go on to demonstrate how these new estimates of net CO2 uptake/loss, gross CO2 uptake, total water evaporation, and transpiration from plants compare to previous and independent estimates.
Abigail Snyder, Noah Prime, Claudia Tebaldi, and Kalyn Dorheim
Earth Syst. Dynam., 15, 1301–1318, https://doi.org/10.5194/esd-15-1301-2024, https://doi.org/10.5194/esd-15-1301-2024, 2024
Short summary
Short summary
From running climate models to using their outputs to identify impacts, modeling the integrated human–Earth system is expensive. This work presents a method to identify a smaller subset of models from the full set that preserves the uncertainty characteristics of the full set. This results in a smaller number of runs that an impact modeler can use to assess how uncertainty propagates from the Earth to the human system, while still capturing the range of outcomes provided by climate models.
Kalyn Dorheim, Skylar Gering, Robert Gieseke, Corinne Hartin, Leeya Pressburger, Alexey N. Shiklomanov, Steven J. Smith, Claudia Tebaldi, Dawn L. Woodard, and Ben Bond-Lamberty
Geosci. Model Dev., 17, 4855–4869, https://doi.org/10.5194/gmd-17-4855-2024, https://doi.org/10.5194/gmd-17-4855-2024, 2024
Short summary
Short summary
Hector is an easy-to-use, global climate–carbon cycle model. With its quick run time, Hector can provide climate information from a run in a fraction of a second. Hector models on a global and annual basis. Here, we present an updated version of the model, Hector V3. In this paper, we document Hector’s new features. Hector V3 is capable of reproducing historical observations, and its future temperature projections are consistent with those of more complex models.
Danica L. Lombardozzi, William R. Wieder, Negin Sobhani, Gordon B. Bonan, David Durden, Dawn Lenz, Michael SanClements, Samantha Weintraub-Leff, Edward Ayres, Christopher R. Florian, Kyla Dahlin, Sanjiv Kumar, Abigail L. S. Swann, Claire M. Zarakas, Charles Vardeman, and Valerio Pascucci
Geosci. Model Dev., 16, 5979–6000, https://doi.org/10.5194/gmd-16-5979-2023, https://doi.org/10.5194/gmd-16-5979-2023, 2023
Short summary
Short summary
We present a novel cyberinfrastructure system that uses National Ecological Observatory Network measurements to run Community Terrestrial System Model point simulations in a containerized system. The simple interface and tutorials expand access to data and models used in Earth system research by removing technical barriers and facilitating research, educational opportunities, and community engagement. The NCAR–NEON system enables convergence of climate and ecological sciences.
Claudia Tebaldi, Abigail Snyder, and Kalyn Dorheim
Earth Syst. Dynam., 13, 1557–1609, https://doi.org/10.5194/esd-13-1557-2022, https://doi.org/10.5194/esd-13-1557-2022, 2022
Short summary
Short summary
Impact modelers need many future scenarios to characterize the consequences of climate change. The climate modeling community cannot fully meet this need because of the computational cost of climate models. Emulators have fallen short of providing the entire range of inputs that modern impact models require. Our proposal, STITCHES, meets these demands in a comprehensive way and may thus support a fully integrated impact research effort and save resources for the climate modeling enterprise.
Yilin Fang, L. Ruby Leung, Ryan Knox, Charlie Koven, and Ben Bond-Lamberty
Geosci. Model Dev., 15, 6385–6398, https://doi.org/10.5194/gmd-15-6385-2022, https://doi.org/10.5194/gmd-15-6385-2022, 2022
Short summary
Short summary
Accounting for water movement in the soil and water transport within the plant is important for plant growth in Earth system modeling. We implemented different numerical approaches for a plant hydrodynamic model and compared their impacts on the simulated aboveground biomass (AGB) at single points and globally. We found care should be taken when discretizing the number of soil layers for numerical simulations as it can significantly affect AGB if accuracy and computational costs are of concern.
Dong-Gill Kim, Ben Bond-Lamberty, Youngryel Ryu, Bumsuk Seo, and Dario Papale
Biogeosciences, 19, 1435–1450, https://doi.org/10.5194/bg-19-1435-2022, https://doi.org/10.5194/bg-19-1435-2022, 2022
Short summary
Short summary
As carbon (C) and greenhouse gas (GHG) research has adopted appropriate technology and approach (AT&A), low-cost instruments, open-source software, and participatory research and their results were well accepted by scientific communities. In terms of cost, feasibility, and performance, the integration of low-cost and low-technology, participatory and networking-based research approaches can be AT&A for enhancing C and GHG research in developing countries.
Jinshi Jian, Xuan Du, Juying Jiao, Xiaohua Ren, Karl Auerswald, Ryan Stewart, Zeli Tan, Jianlin Zhao, Daniel L. Evans, Guangju Zhao, Nufang Fang, Wenyi Sun, Chao Yue, and Ben Bond-Lamberty
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2022-87, https://doi.org/10.5194/essd-2022-87, 2022
Manuscript not accepted for further review
Short summary
Short summary
Field soil loss and sediment yield due to surface runoff observations were compiled into a database named AWESOME: Archive for Water Erosion and Sediment Outflow MEasurements. Annual soil erosion data from 1985 geographic sites and 75 countries have been compiled into AWESOME. This database aims to be an open framework for the scientific community to share field-based annual soil erosion measurements, enabling better understanding of the spatial and temporal variability of annual soil erosion.
Claudia Tebaldi, Kalyn Dorheim, Michael Wehner, and Ruby Leung
Earth Syst. Dynam., 12, 1427–1501, https://doi.org/10.5194/esd-12-1427-2021, https://doi.org/10.5194/esd-12-1427-2021, 2021
Short summary
Short summary
We address the question of how large an initial condition ensemble of climate model simulations should be if we are concerned with accurately projecting future changes in temperature and precipitation extremes. We find that for most cases (and both models considered), an ensemble of 20–25 members is sufficient for many extreme metrics, spatial scales and time horizons. This may leave computational resources to tackle other uncertainties in climate model simulations with our ensembles.
Dawn L. Woodard, Alexey N. Shiklomanov, Ben Kravitz, Corinne Hartin, and Ben Bond-Lamberty
Geosci. Model Dev., 14, 4751–4767, https://doi.org/10.5194/gmd-14-4751-2021, https://doi.org/10.5194/gmd-14-4751-2021, 2021
Short summary
Short summary
We have added a representation of the permafrost carbon feedback to the simple, open-source global carbon–climate model Hector and calibrated the results to be consistent with historical data and Earth system model projections. Our results closely match previous work, estimating around 0.2 °C of warming from permafrost this century. This capability will be useful to explore uncertainties in this feedback and for coupling with integrated assessment models for policy and economic analysis.
Eva Sinha, Kate Calvin, Ben Bond-Lamberty, Beth Drewniak, Dan Ricciuto, Khachik Sargsyan, Yanyan Cheng, Carl Bernacchi, and Caitlin Moore
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2021-244, https://doi.org/10.5194/gmd-2021-244, 2021
Preprint withdrawn
Short summary
Short summary
Perennial bioenergy crops are not well represented in global land models, despite projected increase in their production. Our study expands Energy Exascale Earth System Model (E3SM) Land Model (ELM) to include perennial bioenergy crops and calibrates the model for miscanthus and switchgrass. The calibrated model captures the seasonality and magnitude of carbon and energy fluxes. This study provides the foundation for future research examining the impact of perennial bioenergy crop expansion.
Alexey N. Shiklomanov, Michael C. Dietze, Istem Fer, Toni Viskari, and Shawn P. Serbin
Geosci. Model Dev., 14, 2603–2633, https://doi.org/10.5194/gmd-14-2603-2021, https://doi.org/10.5194/gmd-14-2603-2021, 2021
Short summary
Short summary
Airborne and satellite images are a great resource for calibrating and evaluating computer models of ecosystems. Typically, researchers derive ecosystem properties from these images and then compare models against these derived properties. Here, we present an alternative approach where we modify a model to predict what the satellite would see more directly. We then show how this approach can be used to calibrate model parameters using airborne data from forest sites in the northeastern US.
Dong-Gill Kim, Ben Bond-Lamberty, Youngryel Ryu, Bumsuk Seo, and Dario Papale
Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-85, https://doi.org/10.5194/bg-2021-85, 2021
Manuscript not accepted for further review
Short summary
Short summary
While greenhouse gas (GHG) research has adopted highly advanced technology some have adopted appropriate technology and approach (AT&A) such as low-cost instrument, open source software and participatory research and their results were well accepted by scientific communities. In terms of cost, feasibility and performance, integration of low-cost and low-technology, participatory and networking based research approaches can be AT&A for enhancing GHG research in developing countries.
Jinshi Jian, Rodrigo Vargas, Kristina Anderson-Teixeira, Emma Stell, Valentine Herrmann, Mercedes Horn, Nazar Kholod, Jason Manzon, Rebecca Marchesi, Darlin Paredes, and Ben Bond-Lamberty
Earth Syst. Sci. Data, 13, 255–267, https://doi.org/10.5194/essd-13-255-2021, https://doi.org/10.5194/essd-13-255-2021, 2021
Short summary
Short summary
Field soil-to-atmosphere CO2 flux (soil respiration, Rs) observations were compiled into a global database (SRDB) a decade ago. Here, we restructured and updated the database to the fifth version, SRDB-V5, with data published through 2017 included. SRDB-V5 aims to be a data framework for the scientific community to share seasonal to annual field Rs measurements, and it provides opportunities for the scientific community to better understand the spatial and temporal variability of Rs.
Kalyn Dorheim, Steven J. Smith, and Ben Bond-Lamberty
Geosci. Model Dev., 14, 365–375, https://doi.org/10.5194/gmd-14-365-2021, https://doi.org/10.5194/gmd-14-365-2021, 2021
Short summary
Short summary
Simple climate models are frequently used in research and decision-making communities because of their tractability and low computational cost. Simple climate models are diverse, including highly idealized and process-based models. Here we present a hybrid approach that combines the strength of two types of simple climate models in a flexible framework. This hybrid approach has provided insights into the climate system and opens an avenue for investigating radiative forcing uncertainties.
Zebedee R. J. Nicholls, Malte Meinshausen, Jared Lewis, Robert Gieseke, Dietmar Dommenget, Kalyn Dorheim, Chen-Shuo Fan, Jan S. Fuglestvedt, Thomas Gasser, Ulrich Golüke, Philip Goodwin, Corinne Hartin, Austin P. Hope, Elmar Kriegler, Nicholas J. Leach, Davide Marchegiani, Laura A. McBride, Yann Quilcaille, Joeri Rogelj, Ross J. Salawitch, Bjørn H. Samset, Marit Sandstad, Alexey N. Shiklomanov, Ragnhild B. Skeie, Christopher J. Smith, Steve Smith, Katsumasa Tanaka, Junichi Tsutsui, and Zhiang Xie
Geosci. Model Dev., 13, 5175–5190, https://doi.org/10.5194/gmd-13-5175-2020, https://doi.org/10.5194/gmd-13-5175-2020, 2020
Short summary
Short summary
Computational limits mean that we cannot run our most comprehensive climate models for all applications of interest. In such cases, reduced complexity models (RCMs) are used. Here, researchers working on 15 different models present the first systematic community effort to evaluate and compare RCMs: the Reduced Complexity Model Intercomparison Project (RCMIP). Our research ensures that users of RCMs can more easily evaluate the strengths, weaknesses and limitations of their tools.
Jinshi Jian, Xuan Du, Ryan D. Stewart, Zeli Tan, and Ben Bond-Lamberty
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2020-283, https://doi.org/10.5194/essd-2020-283, 2020
Preprint withdrawn
Short summary
Short summary
Field soil loss due to surface runoff observations were compiled into a global database (SoilErosionDB). The database focuses on three erosion-related metrics – surface runoff, soil erosion, and nutrient leaching – and also records background information. Data from 99 geographic sites and 22 countries around the world have been compiled into SoilErosionDB. SoilErosionDB aims to be a data framework for the scientific community to share field-based soil erosion measurements.
Stephanie C. Pennington, Nate G. McDowell, J. Patrick Megonigal, James C. Stegen, and Ben Bond-Lamberty
Biogeosciences, 17, 771–780, https://doi.org/10.5194/bg-17-771-2020, https://doi.org/10.5194/bg-17-771-2020, 2020
Short summary
Short summary
Soil respiration (Rs) is the flow of CO2 from the soil surface to the atmosphere and is one of the largest carbon fluxes on land. This study examined the effect of local basal area (tree area) on Rs in a coastal forest in eastern Maryland, USA. Rs measurements were taken as well as distance from soil collar, diameter, and species of each tree within a 15 m radius. We found that trees within 5 m of our sampling points had a positive effect on how sensitive soil respiration was to temperature.
Robert Link, Abigail Snyder, Cary Lynch, Corinne Hartin, Ben Kravitz, and Ben Bond-Lamberty
Geosci. Model Dev., 12, 1477–1489, https://doi.org/10.5194/gmd-12-1477-2019, https://doi.org/10.5194/gmd-12-1477-2019, 2019
Short summary
Short summary
Earth system models (ESMs) produce the highest-quality future climate data available, but they are costly to run, so only a few runs from each model are publicly available. What is needed are emulators that tell us what would have happened, if we had been able to perform as many ESM runs as we might have liked. Much of the existing work on emulators has focused on deterministic projections of average values. Here we present a way to imbue emulators with the variability seen in ESM runs.
Katherine Calvin, Pralit Patel, Leon Clarke, Ghassem Asrar, Ben Bond-Lamberty, Ryna Yiyun Cui, Alan Di Vittorio, Kalyn Dorheim, Jae Edmonds, Corinne Hartin, Mohamad Hejazi, Russell Horowitz, Gokul Iyer, Page Kyle, Sonny Kim, Robert Link, Haewon McJeon, Steven J. Smith, Abigail Snyder, Stephanie Waldhoff, and Marshall Wise
Geosci. Model Dev., 12, 677–698, https://doi.org/10.5194/gmd-12-677-2019, https://doi.org/10.5194/gmd-12-677-2019, 2019
Short summary
Short summary
This paper describes GCAM v5.1, an open source model that represents the linkages between energy, water, land, climate, and economic systems. GCAM examines the future evolution of these systems through the end of the 21st century. It can be used to examine, for example, how changes in population, income, or technology cost might alter crop production, energy demand, or water withdrawals, or how changes in one region’s demand for energy affect energy, water, and land in other regions.
Yannick Le Page, Douglas Morton, Corinne Hartin, Ben Bond-Lamberty, José Miguel Cardoso Pereira, George Hurtt, and Ghassem Asrar
Earth Syst. Dynam., 8, 1237–1246, https://doi.org/10.5194/esd-8-1237-2017, https://doi.org/10.5194/esd-8-1237-2017, 2017
Short summary
Short summary
Fires damage large areas of eastern Amazon forests when ignitions from human activity coincide with droughts, while more humid central and western regions are less affected. Here, we use a fire model to estimate that fire activity could increase by an order of magnitude without climate mitigation. Our results show that avoiding further agricultural expansion can limit fire ignitions but that tackling climate change is essential to insulate the interior Amazon through the 21st century.
Cary Lynch, Corinne Hartin, Min Chen, and Ben Bond-Lamberty
Biogeosciences Discuss., https://doi.org/10.5194/bg-2017-405, https://doi.org/10.5194/bg-2017-405, 2017
Revised manuscript has not been submitted
Short summary
Short summary
Heterotrophic respiration (RH) is a large part of the carbon cycle, but it is poorly simulated by climate models. We examine the relationships between RH and key climate variables to understand this uncertainty in observations and from climate models. Compared to observations, models overestimate both the RH trend and climatological relationships. In the future, the relationship between RH and temperature is strong and can be used to explore a wide range of future scenarios.
James C. Stegen, Carolyn G. Anderson, Ben Bond-Lamberty, Alex R. Crump, Xingyuan Chen, and Nancy Hess
Biogeosciences, 14, 4341–4354, https://doi.org/10.5194/bg-14-4341-2017, https://doi.org/10.5194/bg-14-4341-2017, 2017
Short summary
Short summary
CO2 loss from soil to the atmosphere (
soil respiration) is a key ecosystem function, especially in systems with permafrost. We find that soil respiration shows a non-linear threshold at permafrost depths > 140 cm and that the number of large trees governs soil respiration. This suggests that remote sensing could be used to estimate spatial variation in soil respiration and (with knowledge of key thresholds) empirically constrain models that predict ecosystem responses to permafrost thaw.
Francesc Montané, Andrew M. Fox, Avelino F. Arellano, Natasha MacBean, M. Ross Alexander, Alex Dye, Daniel A. Bishop, Valerie Trouet, Flurin Babst, Amy E. Hessl, Neil Pederson, Peter D. Blanken, Gil Bohrer, Christopher M. Gough, Marcy E. Litvak, Kimberly A. Novick, Richard P. Phillips, Jeffrey D. Wood, and David J. P. Moore
Geosci. Model Dev., 10, 3499–3517, https://doi.org/10.5194/gmd-10-3499-2017, https://doi.org/10.5194/gmd-10-3499-2017, 2017
Short summary
Short summary
How carbon is allocated to different plant tissues (leaves, stem, and roots) determines carbon residence time and thus remains a central challenge for understanding the global carbon cycle. In this paper, we compared standard and novel carbon allocation schemes in CLM4.5 and evaluated them using eddy covariance wood and leaf biomass. The dynamic scheme based on work by Litton improved model performance, but this was dependent on model assumptions about woody turnover.
Cary Lynch, Corinne Hartin, Ben Bond-Lamberty, and Ben Kravitz
Earth Syst. Sci. Data, 9, 281–292, https://doi.org/10.5194/essd-9-281-2017, https://doi.org/10.5194/essd-9-281-2017, 2017
Short summary
Short summary
Pattern scaling climate model output is a computationally efficient way to produce a large amount of data for purposes of uncertainty quantification. Using a multi-model ensemble we explore pattern scaling methodologies across two future forcing scenarios. We find that the simple least squares approach to pattern scaling produces a close approximation of actual model output, and we use this as a justification for the creation of an open-access pattern library at multiple time increments.
Ben Kravitz, Cary Lynch, Corinne Hartin, and Ben Bond-Lamberty
Geosci. Model Dev., 10, 1889–1902, https://doi.org/10.5194/gmd-10-1889-2017, https://doi.org/10.5194/gmd-10-1889-2017, 2017
Short summary
Short summary
Pattern scaling is a way of approximating regional changes without needing to run a full, complex global climate model. We compare two methods of pattern scaling for precipitation and evaluate which methods is
betterin particular circumstances. We also decompose precipitation into a CO2 portion and a non-CO2 portion. The methodologies discussed in this paper can help provide precipitation fields for other models for a wide variety of scenarios of future climate change.
Ben Bond-Lamberty, A. Peyton Smith, and Vanessa Bailey
Biogeosciences, 13, 6669–6681, https://doi.org/10.5194/bg-13-6669-2016, https://doi.org/10.5194/bg-13-6669-2016, 2016
Short summary
Short summary
We used a laboratory experiment to examine how climate change and permafrost melting might alter soils in high-latitude regions. Soils were subjected to two temperatures and drought, and gas emissions were monitored. Carbon dioxide fluxes were influenced by temperature, water, and soil nitrogen, while methane emissions were much smaller and linked only with nitrogen. This suggests that such soils may be very sensitive to changes in moisture as discontinuous permafrost thaws in interior Alaska.
Corinne A. Hartin, Benjamin Bond-Lamberty, Pralit Patel, and Anupriya Mundra
Biogeosciences, 13, 4329–4342, https://doi.org/10.5194/bg-13-4329-2016, https://doi.org/10.5194/bg-13-4329-2016, 2016
Cary Lynch, Corinne Hartin, Ben Bond-Lamberty, and Ben Kravitz
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2016-170, https://doi.org/10.5194/gmd-2016-170, 2016
Revised manuscript not accepted
Short summary
Short summary
Pattern scaling is used to explore uncertainty in future forcing scenarios and assess local climate sensitivity to global temperature change. This paper examines the two dominant pattern scaling methods using a multi-model ensemble with two future socio-economic storylines. We find that high latitudes show the strongest sensitivity to global temperature change and that the simple least squared regression approach to generation of patterns is a better fit to projected global temperature.
K. M. Dahlin, R. A. Fisher, and P. J. Lawrence
Biogeosciences, 12, 5061–5074, https://doi.org/10.5194/bg-12-5061-2015, https://doi.org/10.5194/bg-12-5061-2015, 2015
Short summary
Short summary
We compared monthly leaf area index (LAI) estimates from the Community Land Model (CLM) in stress/drought deciduous regions of the world to a satellite-derived estimate of LAI. This comparison revealed an issue in the CLM in which leaves begin to grow during the dry season due to unrealistic soil water movement. We introduced a rainfall trigger to the stress deciduous algorithm to address this issue, then showed the impacts of this change on the fire cycle and stored carbon.
W. D. Collins, A. P. Craig, J. E. Truesdale, A. V. Di Vittorio, A. D. Jones, B. Bond-Lamberty, K. V. Calvin, J. A. Edmonds, S. H. Kim, A. M. Thomson, P. Patel, Y. Zhou, J. Mao, X. Shi, P. E. Thornton, L. P. Chini, and G. C. Hurtt
Geosci. Model Dev., 8, 2203–2219, https://doi.org/10.5194/gmd-8-2203-2015, https://doi.org/10.5194/gmd-8-2203-2015, 2015
Short summary
Short summary
The integrated Earth system model (iESM) has been developed as a
new tool for projecting the joint human-climate system. The
iESM is based upon coupling an integrated assessment model (IAM)
and an Earth system model (ESM) into a common modeling
infrastructure. By introducing heretofore-omitted
feedbacks between natural and societal drivers in iESM, we can improve
scientific understanding of the human-Earth system
dynamics.
C. A. Hartin, P. Patel, A. Schwarber, R. P. Link, and B. P. Bond-Lamberty
Geosci. Model Dev., 8, 939–955, https://doi.org/10.5194/gmd-8-939-2015, https://doi.org/10.5194/gmd-8-939-2015, 2015
Short summary
Short summary
Simple climate models play an integral role in policy and scientific communities. Hector v1.0 is an open-source, object-oriented, simple global climate carbon-cycle model. Hector reproduces the global historical trends of atmospheric [CO2], radiative forcing, and surface temperatures. Hector simulates all four representative concentration pathways with equivalent rates of change of key variables over time compared to current observations and other models.
B. Bond-Lamberty, J. P. Fisk, J. A. Holm, V. Bailey, G. Bohrer, and C. M. Gough
Biogeosciences, 12, 513–526, https://doi.org/10.5194/bg-12-513-2015, https://doi.org/10.5194/bg-12-513-2015, 2015
Short summary
Short summary
How will aging forests behave as they undergo ecological transitions? Can our models, which support scientific, policy, and management analyses, accurately simulate these transitions? We tested whether three forest ecosystem models could reproduce dynamics observed in an experimentally manipulated forest in northern Michigan, USA. None of the models fully captured the post-disturbance C fluxes observed, raising doubts about their ability to simulate tree death after moderate disturbances.
P. C. Stoy, M. C. Dietze, A. D. Richardson, R. Vargas, A. G. Barr, R. S. Anderson, M. A. Arain, I. T. Baker, T. A. Black, J. M. Chen, R. B. Cook, C. M. Gough, R. F. Grant, D. Y. Hollinger, R. C. Izaurralde, C. J. Kucharik, P. Lafleur, B. E. Law, S. Liu, E. Lokupitiya, Y. Luo, J. W. Munger, C. Peng, B. Poulter, D. T. Price, D. M. Ricciuto, W. J. Riley, A. K. Sahoo, K. Schaefer, C. R. Schwalm, H. Tian, H. Verbeeck, and E. Weng
Biogeosciences, 10, 6893–6909, https://doi.org/10.5194/bg-10-6893-2013, https://doi.org/10.5194/bg-10-6893-2013, 2013
Related subject area
Biogeosciences and biodiversity
A spectral–structural characterization of European temperate, hemiboreal, and boreal forests
VODCA v2: multi-sensor, multi-frequency vegetation optical depth data for long-term canopy dynamics and biomass monitoring
Crop-specific management history of phosphorus fertilizer input (CMH-P) in the croplands of the United States: reconciliation of top-down and bottom-up data sources
Enhancing long-term vegetation monitoring in Australia: a new approach for harmonising the Advanced Very High Resolution Radiometer normalised-difference vegetation (NVDI) with MODIS NDVI
A synthesized field survey database of vegetation and active-layer properties for the Alaskan tundra (1972–2020)
Gas exchange velocities (k600), gas exchange rates (K600), and hydraulic geometries for streams and rivers derived from the NEON Reaeration field and lab collection data product (DP1.20190.001)
TCSIF: a temporally consistent global Global Ozone Monitoring Experiment-2A (GOME-2A) solar-induced chlorophyll fluorescence dataset with the correction of sensor degradation
Global nitrous oxide budget (1980–2020)
National forest carbon harvesting and allocation dataset for the period 2003 to 2018
Spatial mapping of key plant functional traits in terrestrial ecosystems across China
HiQ-LAI: a high-quality reprocessed MODIS leaf area index dataset with better spatiotemporal consistency from 2000 to 2022
EUPollMap: the European atlas of contemporary pollen distribution maps derived from an integrated Kriging interpolation approach
Reference maps of soil phosphorus for the pan-Amazon region
Mapping 24 woody plant species phenology and ground forest phenology over China from 1951 to 2020
Sensor-independent LAI/FPAR CDR: reconstructing a global sensor-independent climate data record of MODIS and VIIRS LAI/FPAR from 2000 to 2022
Investigating limnological processes and modern sedimentation at Lake Żabińskie, northeast Poland: a decade-long multi-variable dataset, 2012–2021
Spatiotemporally consistent global dataset of the GIMMS leaf area index (GIMMS LAI4g) from 1982 to 2020
Spatiotemporally consistent global dataset of the GIMMS Normalized Difference Vegetation Index (PKU GIMMS NDVI) from 1982 to 2022
CLIM4OMICS: a geospatially comprehensive climate and multi-OMICS database for maize phenotype predictability in the United States and Canada
Quantifying exchangeable base cations in permafrost: a reserve of nutrients about to thaw
Routine monitoring of western Lake Erie to track water quality changes associated with cyanobacterial harmful algal blooms
The Portuguese Large Wildfire Spread database (PT-FireSprd)
Thirty-meter map of young forest age in China
GRiMeDB: the Global River Methane Database of concentrations and fluxes
A gridded dataset of a leaf-age-dependent leaf area index seasonality product over tropical and subtropical evergreen broadleaved forests
Fire weather index data under historical and shared socioeconomic pathway projections in the 6th phase of the Coupled Model Intercomparison Project from 1850 to 2100
A remote-sensing-based dataset to characterize the ecosystem functioning and functional diversity in the Biosphere Reserve of the Sierra Nevada (southeastern Spain)
A global long-term, high-resolution satellite radar backscatter data record (1992–2022+): merging C-band ERS/ASCAT and Ku-band QSCAT
A global database on holdover time of lightning-ignited wildfires
National CO2 budgets (2015–2020) inferred from atmospheric CO2 observations in support of the global stocktake
Mammals in the Chornobyl Exclusion Zone's Red Forest: a motion-activated camera trap study
Maps with 1 km resolution reveal increases in above- and belowground forest biomass carbon pools in China over the past 20 years
AnisoVeg: anisotropy and nadir-normalized MODIS multi-angle implementation atmospheric correction (MAIAC) datasets for satellite vegetation studies in South America
TiP-Leaf: a dataset of leaf traits across vegetation types on the Tibetan Plateau
Forest structure and individual tree inventories of northeastern Siberia along climatic gradients
Global climate-related predictors at kilometer resolution for the past and future
A daily and 500 m coupled evapotranspiration and gross primary production product across China during 2000–2020
Global land surface 250 m 8 d fraction of absorbed photosynthetically active radiation (FAPAR) product from 2000 to 2021
Rates and timing of chlorophyll-a increases and related environmental variables in global temperate and cold-temperate lakes
Harmonized gap-filled datasets from 20 urban flux tower sites
Holocene spatiotemporal millet agricultural patterns in northern China: a dataset of archaeobotanical macroremains
The biogeography of relative abundance of soil fungi versus bacteria in surface topsoil
Airborne SnowSAR data at X and Ku bands over boreal forest, alpine and tundra snow cover
The Landscape Fire Scars Database: mapping historical burned area and fire severity in Chile
Aridec: an open database of litter mass loss from aridlands worldwide with recommendations on suitable model applications
LegacyPollen 1.0: a taxonomically harmonized global late Quaternary pollen dataset of 2831 records with standardized chronologies
Individual tree point clouds and tree measurements from multi-platform laser scanning in German forests
A 30 m annual maize phenology dataset from 1985 to 2020 in China
Optical and biogeochemical properties of diverse Belgian inland and coastal waters
Comparing national greenhouse gas budgets reported in UNFCCC inventories against atmospheric inversions
Miina Rautiainen, Aarne Hovi, Daniel Schraik, Jan Hanuš, Petr Lukeš, Zuzana Lhotáková, and Lucie Homolová
Earth Syst. Sci. Data, 16, 5069–5087, https://doi.org/10.5194/essd-16-5069-2024, https://doi.org/10.5194/essd-16-5069-2024, 2024
Short summary
Short summary
Radiative transfer models play a key role in monitoring vegetation using remote sensing data such as satellite or airborne images. The development of these models has been hindered by a lack of comprehensive ground reference data on structural and spectral characteristics of forests. Here, we reported datasets on the structural and spectral properties of temperate, hemiboreal, and boreal European forest stands. We anticipate that these data will have wide use in remote sensing applications.
Ruxandra-Maria Zotta, Leander Moesinger, Robin van der Schalie, Mariette Vreugdenhil, Wolfgang Preimesberger, Thomas Frederikse, Richard de Jeu, and Wouter Dorigo
Earth Syst. Sci. Data, 16, 4573–4617, https://doi.org/10.5194/essd-16-4573-2024, https://doi.org/10.5194/essd-16-4573-2024, 2024
Short summary
Short summary
VODCA v2 is a dataset providing vegetation indicators for long-term ecosystem monitoring. VODCA v2 comprises two products: VODCA CXKu, spanning 34 years of observations (1987–2021), suitable for monitoring upper canopy dynamics, and VODCA L (2010–2021), for above-ground biomass monitoring. VODCA v2 has lower noise levels than the previous product version and provides valuable insights into plant water dynamics and biomass changes, even in areas where optical data are limited.
Peiyu Cao, Bo Yi, Franco Bilotto, Carlos Gonzalez Fischer, Mario Herrero, and Chaoqun Lu
Earth Syst. Sci. Data, 16, 4557–4572, https://doi.org/10.5194/essd-16-4557-2024, https://doi.org/10.5194/essd-16-4557-2024, 2024
Short summary
Short summary
This article presents a spatially explicit time series dataset reconstructing crop-specific phosphorus fertilizer application rates, timing, and methods at a 4 km × 4 km resolution in the United States from 1850 to 2022. We comprehensively characterized the spatio-temporal dynamics of P fertilizer management over the last 170 years by considering cross-crop variations. This dataset will greatly contribute to the field of agricultural sustainability assessment and Earth system modeling.
Chad A. Burton, Sami W. Rifai, Luigi J. Renzullo, and Albert I. J. M. Van Dijk
Earth Syst. Sci. Data, 16, 4389–4416, https://doi.org/10.5194/essd-16-4389-2024, https://doi.org/10.5194/essd-16-4389-2024, 2024
Short summary
Short summary
Understanding vegetation response to environmental change requires accurate, long-term data on vegetation condition (VC). We evaluated existing satellite VC datasets over Australia and found them lacking, so we developed a new VC dataset for Australia, AusENDVI. It can be used for studying Australia's changing vegetation dynamics and downstream impacts on the carbon and water cycles, and it provides a reliable foundation for further research into the drivers of vegetation change.
Xiaoran Zhu, Dong Chen, Maruko Kogure, Elizabeth Hoy, Logan T. Berner, Amy L. Breen, Abhishek Chatterjee, Scott J. Davidson, Gerald V. Frost, Teresa N. Hollingsworth, Go Iwahana, Randi R. Jandt, Anja N. Kade, Tatiana V. Loboda, Matt J. Macander, Michelle Mack, Charles E. Miller, Eric A. Miller, Susan M. Natali, Martha K. Raynolds, Adrian V. Rocha, Shiro Tsuyuzaki, Craig E. Tweedie, Donald A. Walker, Mathew Williams, Xin Xu, Yingtong Zhang, Nancy French, and Scott Goetz
Earth Syst. Sci. Data, 16, 3687–3703, https://doi.org/10.5194/essd-16-3687-2024, https://doi.org/10.5194/essd-16-3687-2024, 2024
Short summary
Short summary
The Arctic tundra is experiencing widespread physical and biological changes, largely in response to warming, yet scientific understanding of tundra ecology and change remains limited due to relatively limited accessibility and studies compared to other terrestrial biomes. To support synthesis research and inform future studies, we created the Synthesized Alaskan Tundra Field Dataset (SATFiD), which brings together field datasets and includes vegetation, active-layer, and fire properties.
Kelly S. Aho, Kaelin Cawley, Robert Hensley, Robert O. Hall Jr., Walter Dodds, and Keli Goodman
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-330, https://doi.org/10.5194/essd-2024-330, 2024
Revised manuscript accepted for ESSD
Short summary
Short summary
In streams, gas exchange is fundamental to many biogeochemical processes. Gas exchange depends on the degree of saturation and the gas transfer velocity (k). Currently, k is harder to measure than concentration. NEON conducts tracer-gas experiments at 22 streams. Here, we present our processing pipeline to estimate k from these experiments. This dataset (n = 339) represents the largest compilation of standardized k estimates available and captures substantial within- and across-site variability.
Chu Zou, Shanshan Du, Xinjie Liu, and Liangyun Liu
Earth Syst. Sci. Data, 16, 2789–2809, https://doi.org/10.5194/essd-16-2789-2024, https://doi.org/10.5194/essd-16-2789-2024, 2024
Short summary
Short summary
To obtain a temporally consistent satellite solar-induced chlorophyll fluorescence
(SIF) product (TCSIF), we corrected for time degradation of GOME-2A using a pseudo-invariant method. After the correction, the global SIF grew by 0.70 % per year from 2007 to 2021, and 62.91 % of vegetated regions underwent an increase in SIF. The dataset is a promising tool for monitoring global vegetation variation and will advance our understanding of vegetation's photosynthetic activities at a global scale.
(SIF) product (TCSIF), we corrected for time degradation of GOME-2A using a pseudo-invariant method. After the correction, the global SIF grew by 0.70 % per year from 2007 to 2021, and 62.91 % of vegetated regions underwent an increase in SIF. The dataset is a promising tool for monitoring global vegetation variation and will advance our understanding of vegetation's photosynthetic activities at a global scale.
Hanqin Tian, Naiqing Pan, Rona L. Thompson, Josep G. Canadell, Parvadha Suntharalingam, Pierre Regnier, Eric A. Davidson, Michael Prather, Philippe Ciais, Marilena Muntean, Shufen Pan, Wilfried Winiwarter, Sönke Zaehle, Feng Zhou, Robert B. Jackson, Hermann W. Bange, Sarah Berthet, Zihao Bian, Daniele Bianchi, Alexander F. Bouwman, Erik T. Buitenhuis, Geoffrey Dutton, Minpeng Hu, Akihiko Ito, Atul K. Jain, Aurich Jeltsch-Thömmes, Fortunat Joos, Sian Kou-Giesbrecht, Paul B. Krummel, Xin Lan, Angela Landolfi, Ronny Lauerwald, Ya Li, Chaoqun Lu, Taylor Maavara, Manfredi Manizza, Dylan B. Millet, Jens Mühle, Prabir K. Patra, Glen P. Peters, Xiaoyu Qin, Peter Raymond, Laure Resplandy, Judith A. Rosentreter, Hao Shi, Qing Sun, Daniele Tonina, Francesco N. Tubiello, Guido R. van der Werf, Nicolas Vuichard, Junjie Wang, Kelley C. Wells, Luke M. Western, Chris Wilson, Jia Yang, Yuanzhi Yao, Yongfa You, and Qing Zhu
Earth Syst. Sci. Data, 16, 2543–2604, https://doi.org/10.5194/essd-16-2543-2024, https://doi.org/10.5194/essd-16-2543-2024, 2024
Short summary
Short summary
Atmospheric concentrations of nitrous oxide (N2O), a greenhouse gas 273 times more potent than carbon dioxide, have increased by 25 % since the preindustrial period, with the highest observed growth rate in 2020 and 2021. This rapid growth rate has primarily been due to a 40 % increase in anthropogenic emissions since 1980. Observed atmospheric N2O concentrations in recent years have exceeded the worst-case climate scenario, underscoring the importance of reducing anthropogenic N2O emissions.
Daju Wang, Peiyang Ren, Xiaosheng Xia, Lei Fan, Zhangcai Qin, Xiuzhi Chen, and Wenping Yuan
Earth Syst. Sci. Data, 16, 2465–2481, https://doi.org/10.5194/essd-16-2465-2024, https://doi.org/10.5194/essd-16-2465-2024, 2024
Short summary
Short summary
This study generated a high-precision dataset, locating forest harvested carbon and quantifying post-harvest wood emissions for various uses. It enhances our understanding of forest harvesting and post-harvest carbon dynamics in China, providing essential data for estimating the forest ecosystem carbon budget and emphasizing wood utilization's impact on carbon emissions.
Nannan An, Nan Lu, Weiliang Chen, Yongzhe Chen, Hao Shi, Fuzhong Wu, and Bojie Fu
Earth Syst. Sci. Data, 16, 1771–1810, https://doi.org/10.5194/essd-16-1771-2024, https://doi.org/10.5194/essd-16-1771-2024, 2024
Short summary
Short summary
This study generated a spatially continuous plant functional trait dataset (~1 km) in China in combination with field observations, environmental variables and vegetation indices using machine learning methods. Results showed that wood density, leaf P concentration and specific leaf area showed good accuracy with an average R2 of higher than 0.45. This dataset could provide data support for development of Earth system models to predict vegetation distribution and ecosystem functions.
Kai Yan, Jingrui Wang, Rui Peng, Kai Yang, Xiuzhi Chen, Gaofei Yin, Jinwei Dong, Marie Weiss, Jiabin Pu, and Ranga B. Myneni
Earth Syst. Sci. Data, 16, 1601–1622, https://doi.org/10.5194/essd-16-1601-2024, https://doi.org/10.5194/essd-16-1601-2024, 2024
Short summary
Short summary
Variations in observational conditions have led to poor spatiotemporal consistency in leaf area index (LAI) time series. Using prior knowledge, we leveraged high-quality observations and spatiotemporal correlation to reprocess MODIS LAI, thereby generating HiQ-LAI, a product that exhibits fewer abnormal fluctuations in time series. Reprocessing was done on Google Earth Engine, providing users with convenient access to this value-added data and facilitating large-scale research and applications.
Fabio Oriani, Gregoire Mariethoz, and Manuel Chevalier
Earth Syst. Sci. Data, 16, 731–742, https://doi.org/10.5194/essd-16-731-2024, https://doi.org/10.5194/essd-16-731-2024, 2024
Short summary
Short summary
Modern and fossil pollen data contain precious information for reconstructing the climate and environment of the past. However, these data are only achieved for single locations with no continuity in space. We present here a systematic atlas of 194 digital maps containing the spatial estimation of contemporary pollen presence over Europe. This dataset constitutes a free and ready-to-use tool to study climate, biodiversity, and environment in time and space.
João Paulo Darela-Filho, Anja Rammig, Katrin Fleischer, Tatiana Reichert, Laynara Figueiredo Lugli, Carlos Alberto Quesada, Luis Carlos Colocho Hurtarte, Mateus Dantas de Paula, and David M. Lapola
Earth Syst. Sci. Data, 16, 715–729, https://doi.org/10.5194/essd-16-715-2024, https://doi.org/10.5194/essd-16-715-2024, 2024
Short summary
Short summary
Phosphorus (P) is crucial for plant growth, and scientists have created models to study how it interacts with carbon cycle in ecosystems. To apply these models, it is important to know the distribution of phosphorus in soil. In this study we estimated the distribution of phosphorus in the Amazon region. The results showed a clear gradient of soil development and P content. These maps can help improve ecosystem models and generate new hypotheses about phosphorus availability in the Amazon.
Mengyao Zhu, Junhu Dai, Huanjiong Wang, Juha M. Alatalo, Wei Liu, Yulong Hao, and Quansheng Ge
Earth Syst. Sci. Data, 16, 277–293, https://doi.org/10.5194/essd-16-277-2024, https://doi.org/10.5194/essd-16-277-2024, 2024
Short summary
Short summary
This study utilized 24,552 in situ phenology observation records from the Chinese Phenology Observation Network to model and map 24 woody plant species phenology and ground forest phenology over China from 1951 to 2020. These phenology maps are the first gridded, independent and reliable phenology data sources for China, offering a high spatial resolution of 0.1° and an average deviation of about 10 days. It contributes to more comprehensive research on plant phenology and climate change.
Jiabin Pu, Kai Yan, Samapriya Roy, Zaichun Zhu, Miina Rautiainen, Yuri Knyazikhin, and Ranga B. Myneni
Earth Syst. Sci. Data, 16, 15–34, https://doi.org/10.5194/essd-16-15-2024, https://doi.org/10.5194/essd-16-15-2024, 2024
Short summary
Short summary
Long-term global LAI/FPAR products provide the fundamental dataset for accessing vegetation dynamics and studying climate change. This study develops a sensor-independent LAI/FPAR climate data record based on the integration of Terra-MODIS/Aqua-MODIS/VIIRS LAI/FPAR standard products and applies advanced gap-filling techniques. The SI LAI/FPAR CDR provides a valuable resource for researchers studying vegetation dynamics and their relationship to climate change in the 21st century.
Wojciech Tylmann, Alicja Bonk, Dariusz Borowiak, Paulina Głowacka, Kamil Nowiński, Joanna Piłczyńska, Agnieszka Szczerba, and Maurycy Żarczyński
Earth Syst. Sci. Data, 15, 5093–5103, https://doi.org/10.5194/essd-15-5093-2023, https://doi.org/10.5194/essd-15-5093-2023, 2023
Short summary
Short summary
We present a dataset from the decade-long monitoring of Lake Żabińskie, a hardwater and eutrophic lake in northeast Poland. The lake contains varved sediments, which form a unique archive of past environmental variability. The monitoring program was designed to capture a pattern of relationships between meteorological conditions, limnological processes, and modern sedimentation and to verify if meteorological and limnological phenomena can be precisely tracked with varves.
Sen Cao, Muyi Li, Zaichun Zhu, Zhe Wang, Junjun Zha, Weiqing Zhao, Zeyu Duanmu, Jiana Chen, Yaoyao Zheng, Yue Chen, Ranga B. Myneni, and Shilong Piao
Earth Syst. Sci. Data, 15, 4877–4899, https://doi.org/10.5194/essd-15-4877-2023, https://doi.org/10.5194/essd-15-4877-2023, 2023
Short summary
Short summary
The long-term global leaf area index (LAI) products are critical for characterizing vegetation dynamics under environmental changes. This study presents an updated GIMMS LAI product (GIMMS LAI4g; 1982−2020) based on PKU GIMMS NDVI and massive Landsat LAI samples. With higher accuracy than other LAI products, GIMMS LAI4g removes the effects of orbital drift and sensor degradation in AVHRR data. It has better temporal consistency before and after 2000 and a more reasonable global vegetation trend.
Muyi Li, Sen Cao, Zaichun Zhu, Zhe Wang, Ranga B. Myneni, and Shilong Piao
Earth Syst. Sci. Data, 15, 4181–4203, https://doi.org/10.5194/essd-15-4181-2023, https://doi.org/10.5194/essd-15-4181-2023, 2023
Short summary
Short summary
Long-term global Normalized Difference Vegetation Index (NDVI) products support the understanding of changes in vegetation under environmental changes. This study generates a consistent global NDVI product (PKU GIMMS NDVI) from 1982–2022 that eliminates the issue of orbital drift and sensor degradation in Advanced Very High Resolution Radiometer (AVHRR) data. More accurate than its predecessor (GIMMS NDVI3g), it shows high temporal consistency with MODIS NDVI in describing vegetation trends.
Parisa Sarzaeim, Francisco Muñoz-Arriola, Diego Jarquin, Hasnat Aslam, and Natalia De Leon Gatti
Earth Syst. Sci. Data, 15, 3963–3990, https://doi.org/10.5194/essd-15-3963-2023, https://doi.org/10.5194/essd-15-3963-2023, 2023
Short summary
Short summary
A genomic, phenomic, and climate database for maize phenotype predictability in the US and Canada is introduced. The database encompasses climate from multiple sources and OMICS from the Genomes to Fields initiative (G2F) data from 2014 to 2021, including codes for input data quality and consistency controls. Earth system modelers and breeders can use CLIM4OMICS since it interconnects the climate and biological system sciences. CLIM4OMICS is designed to foster phenotype predictability.
Elisabeth Mauclet, Maëlle Villani, Arthur Monhonval, Catherine Hirst, Edward A. G. Schuur, and Sophie Opfergelt
Earth Syst. Sci. Data, 15, 3891–3904, https://doi.org/10.5194/essd-15-3891-2023, https://doi.org/10.5194/essd-15-3891-2023, 2023
Short summary
Short summary
Permafrost ecosystems are limited in nutrients for vegetation development and constrain the biological activity to the active layer. Upon Arctic warming, permafrost degradation exposes organic and mineral soil material that may directly influence the capacity of the soil to retain key nutrients for vegetation growth and development. Here, we demonstrate that the average total exchangeable nutrient density (Ca, K, Mg, and Na) is more than 2 times higher in the permafrost than in the active layer.
Anna G. Boegehold, Ashley M. Burtner, Andrew C. Camilleri, Glenn Carter, Paul DenUyl, David Fanslow, Deanna Fyffe Semenyuk, Casey M. Godwin, Duane Gossiaux, Thomas H. Johengen, Holly Kelchner, Christine Kitchens, Lacey A. Mason, Kelly McCabe, Danna Palladino, Dack Stuart, Henry Vanderploeg, and Reagan Errera
Earth Syst. Sci. Data, 15, 3853–3868, https://doi.org/10.5194/essd-15-3853-2023, https://doi.org/10.5194/essd-15-3853-2023, 2023
Short summary
Short summary
Western Lake Erie suffers from cyanobacterial harmful algal blooms (HABs) despite decades of international management efforts. In response, the US National Oceanic and Atmospheric Administration (NOAA) Great Lakes Environmental Research Laboratory (GLERL) and the Cooperative Institute for Great Lakes Research (CIGLR) created an annual sampling program to detect, monitor, assess, and predict HABs. Here we describe the data collected from this monitoring program from 2012 to 2021.
Akli Benali, Nuno Guiomar, Hugo Gonçalves, Bernardo Mota, Fábio Silva, Paulo M. Fernandes, Carlos Mota, Alexandre Penha, João Santos, José M. C. Pereira, and Ana C. L. Sá
Earth Syst. Sci. Data, 15, 3791–3818, https://doi.org/10.5194/essd-15-3791-2023, https://doi.org/10.5194/essd-15-3791-2023, 2023
Short summary
Short summary
We reconstructed the spread of 80 large wildfires that burned recently in Portugal and calculated metrics that describe how wildfires behave, such as rate of spread, growth rate, and energy released. We describe the fire behaviour distribution using six percentile intervals that can be easily communicated to both research and management communities. The database will help improve our current knowledge on wildfire behaviour and support better decision making.
Yuelong Xiao, Qunming Wang, Xiaohua Tong, and Peter M. Atkinson
Earth Syst. Sci. Data, 15, 3365–3386, https://doi.org/10.5194/essd-15-3365-2023, https://doi.org/10.5194/essd-15-3365-2023, 2023
Short summary
Short summary
Forest age is closely related to forest production, carbon cycles, and other ecosystem services. Existing stand age products in China derived from remote-sensing images are of a coarse spatial resolution and are not suitable for applications at the regional scale. Here, we mapped young forest ages across China at an unprecedented fine spatial resolution of 30 m. The overall accuracy (OA) of the generated map of young forest stand ages across China was 90.28 %.
Emily H. Stanley, Luke C. Loken, Nora J. Casson, Samantha K. Oliver, Ryan A. Sponseller, Marcus B. Wallin, Liwei Zhang, and Gerard Rocher-Ros
Earth Syst. Sci. Data, 15, 2879–2926, https://doi.org/10.5194/essd-15-2879-2023, https://doi.org/10.5194/essd-15-2879-2023, 2023
Short summary
Short summary
The Global River Methane Database (GRiMeDB) presents CH4 concentrations and fluxes for flowing waters and concurrent measures of CO2, N2O, and several physicochemical variables, plus information about sample locations and methods used to measure gas fluxes. GRiMeDB is intended to increase opportunities to understand variation in fluvial CH4, test hypotheses related to greenhouse gas dynamics, and reduce uncertainty in future estimates of gas emissions from world streams and rivers.
Xueqin Yang, Xiuzhi Chen, Jiashun Ren, Wenping Yuan, Liyang Liu, Juxiu Liu, Dexiang Chen, Yihua Xiao, Qinghai Song, Yanjun Du, Shengbiao Wu, Lei Fan, Xiaoai Dai, Yunpeng Wang, and Yongxian Su
Earth Syst. Sci. Data, 15, 2601–2622, https://doi.org/10.5194/essd-15-2601-2023, https://doi.org/10.5194/essd-15-2601-2023, 2023
Short summary
Short summary
We developed the first time-mapped, continental-scale gridded dataset of monthly leaf area index (LAI) in three leaf age cohorts (i.e., young, mature, and old) from 2001–2018 data (referred to as Lad-LAI). The seasonality of three LAI cohorts from the new Lad-LAI product agrees well at eight sites with very fine-scale collections of monthly LAI. The proposed satellite-based approaches can provide references for mapping finer spatiotemporal-resolution LAI products with different leaf age cohorts.
Yann Quilcaille, Fulden Batibeniz, Andreia F. S. Ribeiro, Ryan S. Padrón, and Sonia I. Seneviratne
Earth Syst. Sci. Data, 15, 2153–2177, https://doi.org/10.5194/essd-15-2153-2023, https://doi.org/10.5194/essd-15-2153-2023, 2023
Short summary
Short summary
We present a new database of four annual fire weather indicators over 1850–2100 and over all land areas. In a 3°C warmer world with respect to preindustrial times, the mean fire weather would increase on average by at least 66% in both intensity and duration and even triple for 1-in-10-year events. The dataset is a freely available resource for fire danger studies and beyond, highlighting that the best course of action would require limiting global warming as much as possible.
Beatriz P. Cazorla, Javier Cabello, Andrés Reyes, Emilio Guirado, Julio Peñas, Antonio J. Pérez-Luque, and Domingo Alcaraz-Segura
Earth Syst. Sci. Data, 15, 1871–1887, https://doi.org/10.5194/essd-15-1871-2023, https://doi.org/10.5194/essd-15-1871-2023, 2023
Short summary
Short summary
This dataset provides scientists, environmental managers, and the public in general with valuable information on the first characterization of ecosystem functional diversity based on primary production developed in the Sierra Nevada (Spain), a biodiversity hotspot in the Mediterranean basin and an exceptional natural laboratory for ecological research within the Long-Term Social-Ecological Research (LTSER) network.
Shengli Tao, Zurui Ao, Jean-Pierre Wigneron, Sassan Saatchi, Philippe Ciais, Jérôme Chave, Thuy Le Toan, Pierre-Louis Frison, Xiaomei Hu, Chi Chen, Lei Fan, Mengjia Wang, Jiangling Zhu, Xia Zhao, Xiaojun Li, Xiangzhuo Liu, Yanjun Su, Tianyu Hu, Qinghua Guo, Zhiheng Wang, Zhiyao Tang, Yi Y. Liu, and Jingyun Fang
Earth Syst. Sci. Data, 15, 1577–1596, https://doi.org/10.5194/essd-15-1577-2023, https://doi.org/10.5194/essd-15-1577-2023, 2023
Short summary
Short summary
We provide the first long-term (since 1992), high-resolution (8.9 km) satellite radar backscatter data set (LHScat) with a C-band (5.3 GHz) signal dynamic for global lands. LHScat was created by fusing signals from ERS (1992–2001; C-band), QSCAT (1999–2009; Ku-band), and ASCAT (since 2007; C-band). LHScat has been validated against independent ERS-2 signals. It could be used in a variety of studies, such as vegetation monitoring and hydrological modelling.
Jose V. Moris, Pedro Álvarez-Álvarez, Marco Conedera, Annalie Dorph, Thomas D. Hessilt, Hugh G. P. Hunt, Renata Libonati, Lucas S. Menezes, Mortimer M. Müller, Francisco J. Pérez-Invernón, Gianni B. Pezzatti, Nicolau Pineda, Rebecca C. Scholten, Sander Veraverbeke, B. Mike Wotton, and Davide Ascoli
Earth Syst. Sci. Data, 15, 1151–1163, https://doi.org/10.5194/essd-15-1151-2023, https://doi.org/10.5194/essd-15-1151-2023, 2023
Short summary
Short summary
This work describes a database on holdover times of lightning-ignited wildfires (LIWs). Holdover time is defined as the time between lightning-induced fire ignition and fire detection. The database contains 42 datasets built with data on more than 152 375 LIWs from 13 countries in five continents from 1921 to 2020. This database is the first freely-available, harmonized and ready-to-use global source of holdover time data, which may be used to investigate LIWs and model the holdover phenomenon.
Brendan Byrne, David F. Baker, Sourish Basu, Michael Bertolacci, Kevin W. Bowman, Dustin Carroll, Abhishek Chatterjee, Frédéric Chevallier, Philippe Ciais, Noel Cressie, David Crisp, Sean Crowell, Feng Deng, Zhu Deng, Nicholas M. Deutscher, Manvendra K. Dubey, Sha Feng, Omaira E. García, David W. T. Griffith, Benedikt Herkommer, Lei Hu, Andrew R. Jacobson, Rajesh Janardanan, Sujong Jeong, Matthew S. Johnson, Dylan B. A. Jones, Rigel Kivi, Junjie Liu, Zhiqiang Liu, Shamil Maksyutov, John B. Miller, Scot M. Miller, Isamu Morino, Justus Notholt, Tomohiro Oda, Christopher W. O'Dell, Young-Suk Oh, Hirofumi Ohyama, Prabir K. Patra, Hélène Peiro, Christof Petri, Sajeev Philip, David F. Pollard, Benjamin Poulter, Marine Remaud, Andrew Schuh, Mahesh K. Sha, Kei Shiomi, Kimberly Strong, Colm Sweeney, Yao Té, Hanqin Tian, Voltaire A. Velazco, Mihalis Vrekoussis, Thorsten Warneke, John R. Worden, Debra Wunch, Yuanzhi Yao, Jeongmin Yun, Andrew Zammit-Mangion, and Ning Zeng
Earth Syst. Sci. Data, 15, 963–1004, https://doi.org/10.5194/essd-15-963-2023, https://doi.org/10.5194/essd-15-963-2023, 2023
Short summary
Short summary
Changes in the carbon stocks of terrestrial ecosystems result in emissions and removals of CO2. These can be driven by anthropogenic activities (e.g., deforestation), natural processes (e.g., fires) or in response to rising CO2 (e.g., CO2 fertilization). This paper describes a dataset of CO2 emissions and removals derived from atmospheric CO2 observations. This pilot dataset informs current capabilities and future developments towards top-down monitoring and verification systems.
Nicholas A. Beresford, Sergii Gashchak, Michael D. Wood, and Catherine L. Barnett
Earth Syst. Sci. Data, 15, 911–920, https://doi.org/10.5194/essd-15-911-2023, https://doi.org/10.5194/essd-15-911-2023, 2023
Short summary
Short summary
Camera traps were established in a highly contaminated area of the Chornobyl Exclusion Zone (CEZ) to capture images of mammals. Over 1 year, 14 mammal species were recorded. The number of species observed did not vary with estimated radiation exposure. The data will be of value from the perspectives of effects of radiation on wildlife and also rewilding in this large, abandoned area. They may also have value in future studies investigating impacts of recent Russian military action in the CEZ.
Yongzhe Chen, Xiaoming Feng, Bojie Fu, Haozhi Ma, Constantin M. Zohner, Thomas W. Crowther, Yuanyuan Huang, Xutong Wu, and Fangli Wei
Earth Syst. Sci. Data, 15, 897–910, https://doi.org/10.5194/essd-15-897-2023, https://doi.org/10.5194/essd-15-897-2023, 2023
Short summary
Short summary
This study presented a long-term (2002–2021) above- and belowground biomass dataset for woody vegetation in China at 1 km resolution. It was produced by combining various types of remote sensing observations with adequate plot measurements. Over 2002–2021, China’s woody biomass increased at a high rate, especially in the central and southern parts. This dataset can be applied to evaluate forest carbon sinks across China and the efficiency of ecological restoration programs in China.
Ricardo Dalagnol, Lênio Soares Galvão, Fabien Hubert Wagner, Yhasmin Mendes de Moura, Nathan Gonçalves, Yujie Wang, Alexei Lyapustin, Yan Yang, Sassan Saatchi, and Luiz Eduardo Oliveira Cruz Aragão
Earth Syst. Sci. Data, 15, 345–358, https://doi.org/10.5194/essd-15-345-2023, https://doi.org/10.5194/essd-15-345-2023, 2023
Short summary
Short summary
The AnisoVeg dataset brings 22 years of monthly satellite data from the Moderate Resolution Imaging Spectroradiometer (MODIS) sensor for South America at 1 km resolution aimed at vegetation applications. It has nadir-normalized data, which is the most traditional approach to correct satellite data but also unique anisotropy data with strong biophysical meaning, explaining 55 % of Amazon forest height. We expect this dataset to help large-scale estimates of vegetation biomass and carbon.
Yili Jin, Haoyan Wang, Jie Xia, Jian Ni, Kai Li, Ying Hou, Jing Hu, Linfeng Wei, Kai Wu, Haojun Xia, and Borui Zhou
Earth Syst. Sci. Data, 15, 25–39, https://doi.org/10.5194/essd-15-25-2023, https://doi.org/10.5194/essd-15-25-2023, 2023
Short summary
Short summary
The TiP-Leaf dataset was compiled from direct field measurements and included 11 leaf traits from 468 species of 1692 individuals, covering a great proportion of species and vegetation types on the highest plateau in the world. This work is the first plant trait dataset that represents all of the alpine vegetation on the TP, which is not only an update of the Chinese plant trait database, but also a great contribution to the global trait database.
Timon Miesner, Ulrike Herzschuh, Luidmila A. Pestryakova, Mareike Wieczorek, Evgenii S. Zakharov, Alexei I. Kolmogorov, Paraskovya V. Davydova, and Stefan Kruse
Earth Syst. Sci. Data, 14, 5695–5716, https://doi.org/10.5194/essd-14-5695-2022, https://doi.org/10.5194/essd-14-5695-2022, 2022
Short summary
Short summary
We present data which were collected on expeditions to the northeast of the Russian Federation. One table describes the 226 locations we visited during those expeditions, and the other describes 40 289 trees which we recorded at these locations. We found out that important information on the forest cannot be predicted precisely from satellites. Thus, for anyone interested in distant forests, it is important to go to there and take measurements or use data (as presented here).
Philipp Brun, Niklaus E. Zimmermann, Chantal Hari, Loïc Pellissier, and Dirk Nikolaus Karger
Earth Syst. Sci. Data, 14, 5573–5603, https://doi.org/10.5194/essd-14-5573-2022, https://doi.org/10.5194/essd-14-5573-2022, 2022
Short summary
Short summary
Using mechanistic downscaling, we developed CHELSA-BIOCLIM+, a set of 15 biologically relevant, climate-related variables at unprecedented resolution, as a basis for environmental analyses. It includes monthly time series for 38+ years and 30-year averages for three future periods and three emission scenarios. Estimates matched well with station measurements, but few biases existed. The data allow for detailed assessments of climate-change impact on ecosystems and their services to societies.
Shaoyang He, Yongqiang Zhang, Ning Ma, Jing Tian, Dongdong Kong, and Changming Liu
Earth Syst. Sci. Data, 14, 5463–5488, https://doi.org/10.5194/essd-14-5463-2022, https://doi.org/10.5194/essd-14-5463-2022, 2022
Short summary
Short summary
This study developed a daily, 500 m evapotranspiration and gross primary production product (PML-V2(China)) using a locally calibrated water–carbon coupled model, PML-V2, which was well calibrated against observations at 26 flux sites across nine land cover types. PML-V2 (China) performs satisfactorily in the plot- and basin-scale evaluations compared with other mainstream products. It improved intra-annual ET and GPP dynamics, particularly in the cropland ecosystem.
Han Ma, Shunlin Liang, Changhao Xiong, Qian Wang, Aolin Jia, and Bing Li
Earth Syst. Sci. Data, 14, 5333–5347, https://doi.org/10.5194/essd-14-5333-2022, https://doi.org/10.5194/essd-14-5333-2022, 2022
Short summary
Short summary
The fraction of absorbed photosynthetically active radiation (FAPAR) is one of the essential climate variables. This study generated a global land surface FAPAR product with a 250 m resolution based on a deep learning model that takes advantage of the existing FAPAR products and MODIS time series of observation information. Direct validation and intercomparison revealed that our product better meets user requirements and has a greater spatiotemporal continuity than other existing products.
Hannah Adams, Jane Ye, Bhaleka D. Persaud, Stephanie Slowinski, Homa Kheyrollah Pour, and Philippe Van Cappellen
Earth Syst. Sci. Data, 14, 5139–5156, https://doi.org/10.5194/essd-14-5139-2022, https://doi.org/10.5194/essd-14-5139-2022, 2022
Short summary
Short summary
Climate warming and land-use changes are altering the environmental factors that control the algal
productivityin lakes. To predict how environmental factors like nutrient concentrations, ice cover, and water temperature will continue to influence lake productivity in this changing climate, we created a dataset of chlorophyll-a concentrations (a compound found in algae), associated water quality parameters, and solar radiation that can be used to for a wide range of research questions.
Mathew Lipson, Sue Grimmond, Martin Best, Winston T. L. Chow, Andreas Christen, Nektarios Chrysoulakis, Andrew Coutts, Ben Crawford, Stevan Earl, Jonathan Evans, Krzysztof Fortuniak, Bert G. Heusinkveld, Je-Woo Hong, Jinkyu Hong, Leena Järvi, Sungsoo Jo, Yeon-Hee Kim, Simone Kotthaus, Keunmin Lee, Valéry Masson, Joseph P. McFadden, Oliver Michels, Wlodzimierz Pawlak, Matthias Roth, Hirofumi Sugawara, Nigel Tapper, Erik Velasco, and Helen Claire Ward
Earth Syst. Sci. Data, 14, 5157–5178, https://doi.org/10.5194/essd-14-5157-2022, https://doi.org/10.5194/essd-14-5157-2022, 2022
Short summary
Short summary
We describe a new openly accessible collection of atmospheric observations from 20 cities around the world, capturing 50 site years. The observations capture local meteorology (temperature, humidity, wind, etc.) and the energy fluxes between the land and atmosphere (e.g. radiation and sensible and latent heat fluxes). These observations can be used to improve our understanding of urban climate processes and to test the accuracy of urban climate models.
Keyang He, Houyuan Lu, Jianping Zhang, and Can Wang
Earth Syst. Sci. Data, 14, 4777–4791, https://doi.org/10.5194/essd-14-4777-2022, https://doi.org/10.5194/essd-14-4777-2022, 2022
Short summary
Short summary
Here we presented the first quantitative spatiotemporal cropping patterns spanning the Neolithic and Bronze ages in northern China. Temporally, millet agriculture underwent a dramatic transition from low-yield broomcorn to high-yield foxtail millet around 6000 cal. a BP under the influence of climate and population. Spatially, millet agriculture spread westward and northward from the mid-lower Yellow River (MLY) to the agro-pastoral ecotone (APE) around 6000 cal. a BP and diversified afterwards.
Kailiang Yu, Johan van den Hoogen, Zhiqiang Wang, Colin Averill, Devin Routh, Gabriel Reuben Smith, Rebecca E. Drenovsky, Kate M. Scow, Fei Mo, Mark P. Waldrop, Yuanhe Yang, Weize Tang, Franciska T. De Vries, Richard D. Bardgett, Peter Manning, Felipe Bastida, Sara G. Baer, Elizabeth M. Bach, Carlos García, Qingkui Wang, Linna Ma, Baodong Chen, Xianjing He, Sven Teurlincx, Amber Heijboer, James A. Bradley, and Thomas W. Crowther
Earth Syst. Sci. Data, 14, 4339–4350, https://doi.org/10.5194/essd-14-4339-2022, https://doi.org/10.5194/essd-14-4339-2022, 2022
Short summary
Short summary
We used a global-scale dataset for the surface topsoil (>3000 distinct observations of abundance of soil fungi versus bacteria) to generate the first quantitative map of soil fungal proportion across terrestrial ecosystems. We reveal striking latitudinal trends. Fungi dominated in regions with low mean annual temperature (MAT) and net primary productivity (NPP) and bacteria dominated in regions with high MAT and NPP.
Juha Lemmetyinen, Juval Cohen, Anna Kontu, Juho Vehviläinen, Henna-Reetta Hannula, Ioanna Merkouriadi, Stefan Scheiblauer, Helmut Rott, Thomas Nagler, Elisabeth Ripper, Kelly Elder, Hans-Peter Marshall, Reinhard Fromm, Marc Adams, Chris Derksen, Joshua King, Adriano Meta, Alex Coccia, Nick Rutter, Melody Sandells, Giovanni Macelloni, Emanuele Santi, Marion Leduc-Leballeur, Richard Essery, Cecile Menard, and Michael Kern
Earth Syst. Sci. Data, 14, 3915–3945, https://doi.org/10.5194/essd-14-3915-2022, https://doi.org/10.5194/essd-14-3915-2022, 2022
Short summary
Short summary
The manuscript describes airborne, dual-polarised X and Ku band synthetic aperture radar (SAR) data collected over several campaigns over snow-covered terrain in Finland, Austria and Canada. Colocated snow and meteorological observations are also presented. The data are meant for science users interested in investigating X/Ku band radar signatures from natural environments in winter conditions.
Alejandro Miranda, Rayén Mentler, Ítalo Moletto-Lobos, Gabriela Alfaro, Leonardo Aliaga, Dana Balbontín, Maximiliano Barraza, Susanne Baumbach, Patricio Calderón, Fernando Cárdenas, Iván Castillo, Gonzalo Contreras, Felipe de la Barra, Mauricio Galleguillos, Mauro E. González, Carlos Hormazábal, Antonio Lara, Ian Mancilla, Francisca Muñoz, Cristian Oyarce, Francisca Pantoja, Rocío Ramírez, and Vicente Urrutia
Earth Syst. Sci. Data, 14, 3599–3613, https://doi.org/10.5194/essd-14-3599-2022, https://doi.org/10.5194/essd-14-3599-2022, 2022
Short summary
Short summary
Achieving a local understanding of fire regimes requires high-resolution, systematic and dynamic data. High-quality information can help to transform evidence into decision-making. Taking advantage of big-data and remote sensing technics we developed a flexible workflow to reconstruct burned area and fire severity data for more than 8000 individual fires in Chile. The framework developed for the database can be applied anywhere in the world with minimal adaptation.
Agustín Sarquis, Ignacio Andrés Siebenhart, Amy Theresa Austin, and Carlos A. Sierra
Earth Syst. Sci. Data, 14, 3471–3488, https://doi.org/10.5194/essd-14-3471-2022, https://doi.org/10.5194/essd-14-3471-2022, 2022
Short summary
Short summary
Plant litter breakdown in aridlands is driven by processes different from those in more humid ecosystems. A better understanding of these processes will allow us to make better predictions of future carbon cycling. We have compiled aridec, a database of plant litter decomposition studies in aridlands and tested some modeling applications for potential users. Aridec is open for use and collaboration, and we hope it will help answer newer and more important questions as the database develops.
Ulrike Herzschuh, Chenzhi Li, Thomas Böhmer, Alexander K. Postl, Birgit Heim, Andrei A. Andreev, Xianyong Cao, Mareike Wieczorek, and Jian Ni
Earth Syst. Sci. Data, 14, 3213–3227, https://doi.org/10.5194/essd-14-3213-2022, https://doi.org/10.5194/essd-14-3213-2022, 2022
Short summary
Short summary
Pollen preserved in environmental archives such as lake sediments and bogs are extensively used for reconstructions of past vegetation and climate. Here we present LegacyPollen 1.0, a dataset of 2831 fossil pollen records from all over the globe that were collected from publicly available databases. We harmonized the names of the pollen taxa so that all datasets can be jointly investigated. LegacyPollen 1.0 is available as an open-access dataset.
Hannah Weiser, Jannika Schäfer, Lukas Winiwarter, Nina Krašovec, Fabian E. Fassnacht, and Bernhard Höfle
Earth Syst. Sci. Data, 14, 2989–3012, https://doi.org/10.5194/essd-14-2989-2022, https://doi.org/10.5194/essd-14-2989-2022, 2022
Short summary
Short summary
3D point clouds, acquired by laser scanning, allow us to retrieve information about forest structure and individual tree properties. We conducted airborne, UAV-borne and terrestrial laser scanning in German mixed forests, resulting in overlapping point clouds with different characteristics. From these, we generated a comprehensive database of individual tree point clouds and corresponding tree metrics. Our dataset may serve as a benchmark dataset for algorithms in forestry research.
Quandi Niu, Xuecao Li, Jianxi Huang, Hai Huang, Xianda Huang, Wei Su, and Wenping Yuan
Earth Syst. Sci. Data, 14, 2851–2864, https://doi.org/10.5194/essd-14-2851-2022, https://doi.org/10.5194/essd-14-2851-2022, 2022
Short summary
Short summary
In this paper we generated the first national maize phenology product with a fine spatial resolution (30 m) and a long temporal span (1985–2020) in China, using Landsat images. The derived phenological indicators agree with in situ observations and provide more spatial details than moderate resolution phenology products. The extracted maize phenology dataset can support precise yield estimation and deepen our understanding of the response of agroecosystem to global warming in the future.
Alexandre Castagna, Luz Amadei Martínez, Margarita Bogorad, Ilse Daveloose, Renaat Dasseville, Heidi Melita Dierssen, Matthew Beck, Jonas Mortelmans, Héloïse Lavigne, Ana Dogliotti, David Doxaran, Kevin Ruddick, Wim Vyverman, and Koen Sabbe
Earth Syst. Sci. Data, 14, 2697–2719, https://doi.org/10.5194/essd-14-2697-2022, https://doi.org/10.5194/essd-14-2697-2022, 2022
Short summary
Short summary
Here we describe a dataset of optical measurements paired with the concentration and composition of dissolved and particulate components of water systems in Belgium. Sampling was performed over eight lakes, a coastal lagoon, an estuary, and coastal waters, covering the period of 2017 to 2019. The data cover a broad range of conditions and can be useful for development and evaluation of hyperspectral methods in hydrology optics and remote sensing.
Zhu Deng, Philippe Ciais, Zitely A. Tzompa-Sosa, Marielle Saunois, Chunjing Qiu, Chang Tan, Taochun Sun, Piyu Ke, Yanan Cui, Katsumasa Tanaka, Xin Lin, Rona L. Thompson, Hanqin Tian, Yuanzhi Yao, Yuanyuan Huang, Ronny Lauerwald, Atul K. Jain, Xiaoming Xu, Ana Bastos, Stephen Sitch, Paul I. Palmer, Thomas Lauvaux, Alexandre d'Aspremont, Clément Giron, Antoine Benoit, Benjamin Poulter, Jinfeng Chang, Ana Maria Roxana Petrescu, Steven J. Davis, Zhu Liu, Giacomo Grassi, Clément Albergel, Francesco N. Tubiello, Lucia Perugini, Wouter Peters, and Frédéric Chevallier
Earth Syst. Sci. Data, 14, 1639–1675, https://doi.org/10.5194/essd-14-1639-2022, https://doi.org/10.5194/essd-14-1639-2022, 2022
Short summary
Short summary
In support of the global stocktake of the Paris Agreement on climate change, we proposed a method for reconciling the results of global atmospheric inversions with data from UNFCCC national greenhouse gas inventories (NGHGIs). Here, based on a new global harmonized database that we compiled from the UNFCCC NGHGIs and a comprehensive framework presented in this study to process the results of inversions, we compared their results of carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O).
Cited articles
American Geophysical Union: The Responsibilities and Rights of
Scientists, available at: https://www.agu.org/Share-and-Advocate/Share/Policymakers/Position-Statements/Rights-and-responsibilities-of-scientists (last access: 23 April 2020), 2017.
Amiro, B. D., Barr, A. G., Barr, J. G., Black, T. A., Bracho, R., Brown, M.,
Chen, J. M., Clark, K. L., Davis, K. J., Desai, A. R., Dore, S., Engel, V.,
Fuentes, J. D., Goldstein, A. H., Goulden, M. L., Kolb, T. E., Lavigne, M.
B., Law, B. E., Margolis, H. A., Martin, T. A., McCaughey, J. H., Misson,
L., Montes-Helu, M., Noormets, A., Randerson, J. T., Starr, and G. Xiao, J.:
Ecosystem carbon dioxide fluxes after disturbance in forests of North
America, J. Geophys. Res.-Biogeo., 115, G00K02, https://doi.org/10.1029/2010JG001390, 2010.
Atkins, J. W., Bohrer, G., Fahey, R. T., Hardiman, B. S., Morin, T. H.,
Stovall, A. E., and Gough, C. M.: Quantifying vegetation and canopy
structural complexity from terrestrial LiDAR data using the forestr r
package, Methods Ecol. Evol., 9, 2057–2066, 2018.
Atkins, J. W., Bond-Lamberty, B., Fahey, R. T., Hardiman, B. S., Haber, L.,
Stuart-Haëntjens, E., and Tallant, J.: Multidimensional Structural
Characterization is Required to Detect and Differentiate Among Moderate
Disturbance Agents, Ecosphere, 11, 1–19, https://doi.org/10.1002/ecs2.3156, 2020a.
Atkins, J. W., Bond-Lamberty, B., Dorheim, K., Pennington, S., and
Shiklomanov, A.: fortedata v1.0.2 (Version 1.0.2), Zenodo,
https://doi.org/10.5281/zenodo.4399601, 2020b.
Atkins, J. W., Bond-lamberty, B., Dorheim, K., Pennington, S. C.,
Shiklomanov, A., Agee, E., Gough, C. M., Shiklomanov, A., Dorheim, K., Pennington, S., Barry, A., Dahlin, K., Grigri, M., Haber, L., Hickey, L., Kamoske, A., Mathes, K., McGuigan, C., Paris, E., Rodriguez, C., Shafer, A., and Tallant, J.: fortedata-1.0.2, Dataset,
figshare, https://doi.org/10.6084/m9.figshare.13499148.v1, 2020c.
Bond-Lamberty, B., Smith, A. P., and Bailey, V.: Running an open experiment:
transparency and reproducibility in soil and ecosystem
science, Environ. Res. Lett., 11, 084004, https://doi.org/10.1088/1748-9326/11/8/084004. 2016.
Coomes, D. A., Holdaway, R. J., Kobe, R. K., Lines, E. R., and Allen, R.
B.: A general integrative framework for modelling woody biomass production
and carbon sequestration rates in forests, J. Ecol., 100,
42–64, 2012.
Culina, A., Baglioni, M., Crowther, T. W., Visser, M. E.,
Woutersen-Windhouwer, S., and Manghi, P.: Navigating the unfolding open data
landscape in ecology and evolution, Nature E and E, 2, 420–426, 2018.
Fahey, R. T., Atkins, J. W., Gough, C. M., Hardiman, B. S., Nave, L. E.,
Tallant, J. M., and Haber, L. T.: Defining a spectrum of integrative
trait-based vegetation canopy structural types, Ecol. Lett., 22,
2049–2059, 2019.
Fahey, R. T., Atkins, J. W., Campbell, J. L., Rustad, L. E., Duffy, M.,
Driscoll, C. T., Fahey, T. J., and Schaberg, P. G.: Effects of an
experimental ice storm on forest canopy structure, Can. J. Forest Res., 50,
136–145, 2020.
Falster, D. S., FitzJohn, R. G., Pennell, M. W., and Cornwell, W. K.: Datastorr: a workflow and package for delivering successive versions of “evolving data” directly into R, GigaScience, 8, giz035,
https://doi.org/10.1093/gigascience/giz035, 2019.
Flower, C. E. and Gonzalez-Meler, M. A.: Responses of temperate forest
productivity to insect and pathogen disturbances, Annu. Rev. Plant
Biol., 66, 547–569, 2015.
Frelich, L. E. and Reich, P. B.: Minireviews: Neighborhood Effects,
Disturbance Severity, and Community Stability in Forests, Ecosystems, 2,
151–166, 1999.
Gallagher, R. V., Falster, D. S., Maitner, B. S., Salguero-Gómez, R.,
Vandvik, V., Pearse, W. D., and Ankenbrand, M. J.: Open Science
principles for accelerating trait-based science across the Tree of Life,
Nature Ecology & Evolution, 4, 294–303, 2020.
Gough, C. M., Hardiman, B. S., Nave, L. E., Bohrer, G., Maurer, K. D.,
Vogel, C. S., Nadelhoffer, K. J., and Curtis, P. S.: Sustained carbon uptake
and storage following moderate disturbance in a Great Lakes forest, Ecol.
Appl., 23, 1202–1215, 2013.
Gough, C. M., Atkins, J. W., Bond-Lamberty, B., Agee, E. A., Dorheim, K. R., Fahey, R. T., Grigri, M. S., Haber, L. T., Mathes, K. C. Pennington, S. C.,
Shiklomanov, A. N., and Tallant, J. M.: Forest Structural Complexity and Biomass Predict First-Year Carbon Cycling Responses to Disturbancem Ecosystems, 1–14, https://doi.org/10.1007/s10021-020-00544-1, 2020.
Gu, H., Williams, C. A., Hasler, N., and Zhou, Y.: The carbon balance of
the southeastern US forest sector as driven by recent disturbance trends,
J. Geophys. Res.-Biogeo., 124, 2786–2803, 2019.
Hicke, J. A., Allen, C. D., Desai, A. R., Dietze, M. C., Hall, R. J., Hogg,
E. H., and Vogelmann, J.: Effects of biotic disturbances on forest
carbon cycling in the United States and Canada, Glob. Change Biol.,
18, 7–34, 2012.
Johnstone, J. F., McIntire, E. J., Pedersen, E. J., King, G., and Pisaric,
M. J.: A sensitive slope: estimating landscape patterns of forest resilience
in a changing climate, Ecosphere, 1, 1–21, 2010.
Johnstone, J. F., Allen, C. D., Franklin, J. F., Frelich, L. E., Harvey, B.
J., Higuera, P. E., and Schoennagel, T.: Changing disturbance regimes,
ecological memory, and forest resilience, Front. Ecol.
Environ., 14, 369–378, 2016.
Luo, Y. and Weng, E.: Dynamic disequilibrium of the terrestrial carbon
cycle under global change, Trends Ecol. Evol., 26, 96–104,
2010.
Pearsall, D. R.: Landscape ecosystems of the University of Michigan Biological Station: Ecosystem diversity and ground-cover diversity, Doctoral dissertation, The University of Michigan, 1996.
Peters, E. B., Wythers, K. R., Bradford, J. B., and Reich, P. B.: Influence
of disturbance on temperate forest productivity, Ecosystems, 16, 95–110,
2013.
Powers, S. M. and Hampton, S. E.: Open science, reproducibility, and
transparency in ecology, Ecol. Appl., 29, e01822, https://doi.org/10.1002/eap.1822, 2019.
Rebane, S., Jõgiste, K., Põldveer, E., Stanturf, J. A., and
Metslaid, M.: Direct measurements of carbon exchange at forest disturbance
sites: a review of results with the eddy covariance method, Scand.
J. Forest Res., 34, 585–597, 2019.
Rosenthal, R.: The file drawer problem and tolerance for null results, Psychological Bulletin, 86, 638–641, 1979.
Schapira, M., Harding, R. J., and The Open Lab Notebook Consortium: Open
laboratory notebooks: good for science, good for society, good for
scientists, F1000Research, 8, 87, https://doi.org/10.12688/f1000research.17710.1, 2019.
Scheuermann, C. M., Nave, L. E., Fahey, R. T., Nadelhoffer, K. J., and
Gough, C. M.: Effects of canopy structure and species diversity on primary
production in upper Great Lakes forests, Oecologia, 2, 405–415,
https://doi.org/10.1007/s00442-018-4236-x, 2018.
Shiels, A. B. and González, G.: Understanding the key mechanisms of
tropical forest responses to canopy loss and biomass deposition from
experimental hurricane effects, Forest Ecol. Manage., 332, 1–10, 2014.
Shiklomanov, A. N., Bond-Lamberty, B., Atkins, J., and Gough, C. M.: Structure
and parameter uncertinty in centennial projections of forest community
structure and carbon cycling, Glob. Change Biol., 26, 6080–6096,
https://doi.org/10.1111/gcb.15164,
2021.
Vanderwel, M. C., Coomes, D. A., and Purves, D. W.: Quantifying variation
in forest disturbance, and its effects on aboveground biomass dynamics,
across the eastern United States, Glob. Change Biol., 19, 1504–1517,
2013.
White, P. S. and Jentsch, A.: The Search for Generality in Studies of
Disturbance and Ecosystem Dynamics, in: Progress in Botany: Genetics
Physiology Systematics Ecology, edited by: Esser, K., Lüttge, U.,
Kadereit, J. W., and Beyschlag, W., Springer Berlin Heidelberg,
Berlin, Heidelberg, 399–450, 2001.
Wickham, H., Hester, J., and Change, W.: devtools: Tools to Make
Developing R Packages Easier, R package version 2.3.0, available at:
https://CRAN.R-project.org/package=devtools (last access: 15 January 2021), 2020.
Wilkinson, M. D., Dumontier, M., Aalbersberg, I. J., Appleton, G., Axton, M., Baak, A.,
Blomberg, N., Boiten, J. W., da Silva Santos, L. B., Bourne, P. E., and Bouwman, J.: The FAIR
Guiding Principles for scientific data management and stewardship,
Sci. Data, 3, 1–9,
https://doi.org/10.1038/sdata.2016.18, 2016.
Williams, C. A., Collatz, G. J., Masek, J. G., and Goward, S. N.: Carbon
consequences of forest disturbance and recovery across the conterminous
United States, Global Biochem. Cy., 26, GB1005, https://doi.org/10.1029/2010GB003947, 2012.
Williams, C. A., Gu, H., MacLean, R., Masek, J. G., and Collatz, G. J.:
Disturbance and the carbon balance of US forests: A quantitative
review of impacts from harvests, fires, insects, and droughts, Global
Planet. Change, 143, 66–80, 2016.
Short summary
The fortedata R package is an open data notebook from the Forest Resilience Threshold Experiment (FoRTE) – a modeling and manipulative field experiment that tests the effects of disturbance severity and disturbance type on carbon cycling dynamics in a temperate forest. The data included help to interpret how carbon cycling processes respond over time to disturbance.
The fortedata R package is an open data notebook from the Forest Resilience Threshold Experiment...
Altmetrics
Final-revised paper
Preprint