Articles | Volume 16, issue 8
https://doi.org/10.5194/essd-16-3851-2024
© Author(s) 2024. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/essd-16-3851-2024
© Author(s) 2024. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Data description paper
| 
28 Aug 2024
Data description paper |
| 28 Aug 2024
| 28 Aug 2024
Early-life dispersal traits of coastal fishes: an extensive database combining observations and growth models
Marine Di Stefano
CORRESPONDING AUTHOR
Mediterranean Institute of Oceanography (MIO, UM 110, UMR 7294), Aix Marseille Univ., Univ. Toulon, CNRS, IRD, Marseille, 13288, France
David Nerini
Mediterranean Institute of Oceanography (MIO, UM 110, UMR 7294), Aix Marseille Univ., Univ. Toulon, CNRS, IRD, Marseille, 13288, France
Itziar Alvarez
Mediterranean Institute for Advanced Studies, IMEDEA (UIB-CSIC), Miquel Marques 21, 07190 Esporles, Balearic Islands, Spain
Giandomenico Ardizzone
Marine Ecology and Biology Lab, Department of Environmental Biology, Sapienza University of Rome, Rome, Italy
Patrick Astruch
GIS Posidonie, Case 901, Campus de Luminy, 13288, Marseille CEDEX 9, France
Gotzon Basterretxea
Mediterranean Institute for Advanced Studies, IMEDEA (UIB-CSIC), Miquel Marques 21, 07190 Esporles, Balearic Islands, Spain
Aurélie Blanfuné
Mediterranean Institute of Oceanography (MIO, UM 110, UMR 7294), Aix Marseille Univ., Univ. Toulon, CNRS, IRD, Marseille, 13288, France
Denis Bonhomme
GIS Posidonie, Case 901, Campus de Luminy, 13288, Marseille CEDEX 9, France
Antonio Calò
Department of Earth and Marine sciences (DiSTeM), University of Palermo, Via Archirafi 20-22, 90123, Palermo, Italy
Ignacio Catalan
Mediterranean Institute for Advanced Studies, IMEDEA (UIB-CSIC), Miquel Marques 21, 07190 Esporles, Balearic Islands, Spain
Carlo Cattano
Stazione Zoologica Anton Dohrn, Department of Integrative Marine Ecology, Sicily Marine Center, Lungomare Cristoforo Colombo (complesso Roosevelt), 90149, Palermo, Italy
Adrien Cheminée
Septentrion Environnement, 89 Traverse Parangon, 13008, Marseille, France
Faculté des Sciences, Aix Marseille Université, 163 Avenue de Luminy, Case 901, 13288 Marseille, France
Romain Crec'hriou
Station Biologique CNRS, Sorbonne Université, Service Observation, Place Georges Teissier CS90074, 29688, Roscoff, France
Amalia Cuadros
Instituto Español de Oceanografía, Centro Oceanográfico de Cádiz, Puerto Pesquero, Muelle de Levante, s/n, P.O. Box 2609, 11006, Cádiz, Spain
Antonio Di Franco
Stazione Zoologica Anton Dohrn, Department of Integrative Marine Ecology, Sicily Marine Center, Lungomare Cristoforo Colombo (complesso Roosevelt), 90149, Palermo, Italy
Carlos Diaz-Gil
Xelect Ltd., St. Andrews, KY16 9LB, UK
Tristan Estaque
Septentrion Environnement, 89 Traverse Parangon, 13008, Marseille, France
Robin Faillettaz
DECOD (Ecosystem Dynamics and Sustainability), IFREMER, INRAE, Institut Agro, Lorient, France
Fabiana C. Félix-Hackradt
Marine Ecology and Conservation Lab., Centre of Environmental Science, Universidade Federal do Sul da Bahia, Rod Joel Maers BR 367, km 10, CEP: 45810-000 Porto Seguro, Bahia, Brazil
José Antonio Garcia-Charton
Departamento de Ecología e Hidrología, Universidad de Murcia, Campus Mare Nostrum de Excelencia Internacional, 30100, Murcia, Spain
Paolo Guidetti
Department of Integrative Marine Ecology (EMI), Stazione Zoologica Anton Dohrn, National Institute of Marine Biology, Ecology and Biotechnology, Genoa Marine Centre, Villa del Principe, Piazza del Principe 4, 16126 Genoa, Italy
National Research Council, Institute for the Study of Anthropic Impact and Sustainability in the Marine Environment (CNR-IAS), Via de Marini 6, 16149 Genoa, Italy
Loïc Guilloux
Mediterranean Institute of Oceanography (MIO, UM 110, UMR 7294), Aix Marseille Univ., Univ. Toulon, CNRS, IRD, Marseille, 13288, France
Jean-Georges Harmelin
GIS Posidonie, Case 901, Campus de Luminy, 13288, Marseille CEDEX 9, France
Mireille Harmelin-Vivien
Mediterranean Institute of Oceanography (MIO, UM 110, UMR 7294), Aix Marseille Univ., Univ. Toulon, CNRS, IRD, Marseille, 13288, France
Manuel Hidalgo
Spanish Institute of Oceanography (IEO, CSIC), Balearic Oceanographic Center (COB), Ecosystem Oceanography Group (GRECO), Moll de Ponent s/n, 07015 Palma, Spain
Hilmar Hinz
Mediterranean Institute for Advanced Studies, IMEDEA (UIB-CSIC), Miquel Marques 21, 07190 Esporles, Balearic Islands, Spain
Jean-Olivier Irisson
Sorbonne Université, CNRS, Laboratoire d’Océanographie de Villefranche (LOV), Villefranche-sur-Mer, France
Gabriele La Mesa
Department Monitoraggio biodiversità marina, Italian Institute for Environmental Protection and Research (ISPRA), Rome, Italy
Laurence Le Diréach
GIS Posidonie, Case 901, Campus de Luminy, 13288, Marseille CEDEX 9, France
Philippe Lenfant
Université de Perpignan Via Domitia, Centre de Formation et de Recherche sur les Environnements Méditerranéens, UMR 5110, 52 Avenue Paul Alduy, 66860, Perpignan, France
Enrique Macpherson
Centre d’Estudis Avançats de Blanes (LEOV-CEAB-CSIC), Otolith Research Lab, Car. Acc. Cala St. Francesc 14, 17300, Blanes, Girona, Spain
Sanja Matić-Skoko
Institute of Oceanography and Fisheries, Šetalište Ivana Meštrovica 63, 21000 Split, Croatia
Manon Mercader
Université de Perpignan Via Domitia, Centre de Formation et de Recherche sur les Environnements Méditerranéens, UMR 5110, 52 Avenue Paul Alduy, 66860, Perpignan, France
Marco Milazzo
Department of Earth and Marine sciences (DiSTeM), University of Palermo, Via Archirafi 20-22, 90123, Palermo, Italy
Tiffany Monfort
Mediterranean Institute of Oceanography (MIO, UM 110, UMR 7294), Aix Marseille Univ., Univ. Toulon, CNRS, IRD, Marseille, 13288, France
Septentrion Environnement, 89 Traverse Parangon, 13008, Marseille, France
Joan Moranta
Spanish Institute of Oceanography (IEO, CSIC), Balearic Oceanographic Center (COB), Ecosystem Oceanography Group (GRECO), Moll de Ponent s/n, 07015 Palma, Spain
Manuel Muntoni
Groupement d’Intérêt Public Seine Aval, Hangar C, Espace des Marégraphes, Quai de Boisguilbert, 76000 Rouen, France
Matteo Murenu
Department of Life and Environmental Science, University of Cagliari, Cagliari, Italy
Lucie Nunez
Septentrion Environnement, 89 Traverse Parangon, 13008, Marseille, France
M. Pilar Olivar
Institut de Ciències del Mar (ICM-CSIC), Passeig Marítim de la Barceloneta, 37–49, Barcelona 08003, Spain
Jérémy Pastor
48 rue Rouget de l’Isle, 66310, Estagel, France
Ángel Pérez-Ruzafa
Departamento de Ecología e Hidrología, Universidad de Murcia, Campus Mare Nostrum de Excelencia Internacional, 30100, Murcia, Spain
Serge Planes
PSL Research University, EPHE-UPVD-CNRS, UAR 3278 CRIOBE, Université de Perpignan, 66860 Perpignan CEDEX, France
Nuria Raventos
Centre d’Estudis Avançats de Blanes (LEOV-CEAB-CSIC), Otolith Research Lab, Car. Acc. Cala St. Francesc 14, 17300, Blanes, Girona, Spain
Justine Richaume
Septentrion Environnement, 89 Traverse Parangon, 13008, Marseille, France
Elodie Rouanet
GIS Posidonie, Case 901, Campus de Luminy, 13288, Marseille CEDEX 9, France
Erwan Roussel
independent researcher
Sandrine Ruitton
Mediterranean Institute of Oceanography (MIO, UM 110, UMR 7294), Aix Marseille Univ., Univ. Toulon, CNRS, IRD, Marseille, 13288, France
Ana Sabatés
Institut de Ciències del Mar (ICM-CSIC), Passeig Marítim de la Barceloneta, 37–49, Barcelona 08003, Spain
Thierry Thibaut
Mediterranean Institute of Oceanography (MIO, UM 110, UMR 7294), Aix Marseille Univ., Univ. Toulon, CNRS, IRD, Marseille, 13288, France
Daniele Ventura
Marine Ecology and Biology Lab, Department of Environmental Biology, Sapienza University of Rome, Rome, Italy
Laurent Vigliola
UMR ENTROPIE, IRD-UR-UNC-IFREMER-CNRS, Centre IRD de Nouméa, Nouméa CEDEX, New Caledonia, France
Dario Vrdoljak
Institute of Oceanography and Fisheries, Šetalište Ivana Meštrovica 63, 21000 Split, Croatia
Vincent Rossi
CORRESPONDING AUTHOR
Mediterranean Institute of Oceanography (MIO, UM 110, UMR 7294), Aix Marseille Univ., Univ. Toulon, CNRS, IRD, Marseille, 13288, France
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Revised manuscript accepted for ESSD
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Yuan Zhang, Fang Shen, Renhu Li, Mengyu Li, Zhaoxin Li, Songyu Chen, and Xuerong Sun
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This work describes AIGD-PFT, the first AI-driven global daily gap-free 4 km phytoplankton functional type (PFT) product from 1998 to 2023. AIGD-PFT enhances the accuracy and spatiotemporal coverage quantification of eight major PFTs (i.e. diatoms, dinoflagellates, haptophytes, pelagophytes, cryptophytes, green algae, prokaryotes, and Prochlorococcus).
Yan Yang, Patrick Brockmann, Carolina Galdino, Uwe Schindler, and Frédéric Gazeau
Earth Syst. Sci. Data, 16, 3771–3780, https://doi.org/10.5194/essd-16-3771-2024, https://doi.org/10.5194/essd-16-3771-2024, 2024
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Studies investigating the effects of ocean acidification on marine organisms and communities have been steadily increasing. To facilitate data comparison, a data compilation hosted by the PANGAEA Data Publisher was initiated in 2008 and is updated on a regular basis. By November 2023, a total of 1501 datasets (~25 million data points) from 1554 papers have been archived. To filter and access relevant biological response data from this compilation, a user-friendly portal was launched in 2018.
Mathilde Dugenne, Marco Corrales-Ugalde, Jessica Y. Luo, Rainer Kiko, Todd D. O'Brien, Jean-Olivier Irisson, Fabien Lombard, Lars Stemmann, Charles Stock, Clarissa R. Anderson, Marcel Babin, Nagib Bhairy, Sophie Bonnet, Francois Carlotti, Astrid Cornils, E. Taylor Crockford, Patrick Daniel, Corinne Desnos, Laetitia Drago, Amanda Elineau, Alexis Fischer, Nina Grandrémy, Pierre-Luc Grondin, Lionel Guidi, Cecile Guieu, Helena Hauss, Kendra Hayashi, Jenny A. Huggett, Laetitia Jalabert, Lee Karp-Boss, Kasia M. Kenitz, Raphael M. Kudela, Magali Lescot, Claudie Marec, Andrew McDonnell, Zoe Mériguet, Barbara Niehoff, Margaux Noyon, Thelma Panaïotis, Emily Peacock, Marc Picheral, Emilie Riquier, Collin Roesler, Jean-Baptiste Romagnan, Heidi M. Sosik, Gretchen Spencer, Jan Taucher, Chloé Tilliette, and Marion Vilain
Earth Syst. Sci. Data, 16, 2971–2999, https://doi.org/10.5194/essd-16-2971-2024, https://doi.org/10.5194/essd-16-2971-2024, 2024
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Plankton and particles influence carbon cycling and energy flow in marine ecosystems. We used three types of novel plankton imaging systems to obtain size measurements from a range of plankton and particle sizes and across all major oceans. Data were compiled and cross-calibrated from many thousands of images, showing seasonal and spatial changes in particle size structure in different ocean basins. These datasets form the first release of the Pelagic Size Structure database (PSSdb).
Murray S. A. Thompson, Izaskun Preciado, Federico Maioli, Valerio Bartolino, Andrea Belgrano, Michele Casini, Pierre Cresson, Elena Eriksen, Gema Hernandez-Milian, Ingibjörg G. Jónsdóttir, Stefan Neuenfeldt, John F. Pinnegar, Stefán Ragnarsson, Sabine Schueckel, Ulrike Schueckel, Brian E. Smith, María Á. Torres, Thomas J. Webb, and Christopher P. Lynam
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-102, https://doi.org/10.5194/essd-2024-102, 2024
Revised manuscript accepted for ESSD
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We collated data from multiple fish stomach content databases to improve understanding of marine food web interactions for the North Atlantic and Arctic Oceans. These data were used to categorise fish into feeding guilds and applied to understand change in fish populations observed in scientific trawl surveys. This revealed spatially extensive temporal change in marine ecosystem structure and functioning. Our study provides evidence supporting a candidate food web indicator for the OSPAR Area.
Nina Grandremy, Paul Bourriau, Edwin Daché, Marie-Madeleine Danielou, Mathieu Doray, Christine Dupuy, Bertrand Forest, Laetitia Jalabert, Martin Huret, Sophie Le Mestre, Antoine Nowaczyk, Pierre Petitgas, Philippe Pineau, Justin Rouxel, Morgan Tardivel, and Jean-Baptiste Romagnan
Earth Syst. Sci. Data, 16, 1265–1282, https://doi.org/10.5194/essd-16-1265-2024, https://doi.org/10.5194/essd-16-1265-2024, 2024
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We present two space- and time-resolved zooplankton datasets originating from samples collected in the Bay of Biscay in spring over the 2004–2019 period and imaged with the interoperable imaging systems ZooScan and ZooCAM. These datasets are suited for long-term size-based or combined size- and taxonomy-based ecological studies of zooplankton. The set of sorted images are provided along with a set of morphological descriptors that are useful when machine learning is applied to plankton studies.
Dieter Piepenburg, Thomas Brey, Katharina Teschke, Jennifer Dannheim, Paul Kloss, Marianne Rehage, Miriam L. S. Hansen, and Casper Kraan
Earth Syst. Sci. Data, 16, 1177–1184, https://doi.org/10.5194/essd-16-1177-2024, https://doi.org/10.5194/essd-16-1177-2024, 2024
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Research on ecological footprints of climate change and human impacts in Arctic seas is still hampered by problems in accessing sound data, which is unevenly distributed among regions and faunal groups. To address this issue, we present the PAN-Arctic data collection of benthic BIOtas (PANABIO). It provides open access to valuable biodiversity information by integrating data from various sources and of various formats and offers versatile exploration tools for data filtering and mapping.
Sarah-Anne Nicholson, Thomas J. Ryan-Keogh, Sandy J. Thomalla, Nicolette Chang, and Marié E. Smith
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-21, https://doi.org/10.5194/essd-2024-21, 2024
Revised manuscript accepted for ESSD
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The annual greening of the global ocean by the widespread growth of phytoplankton blooms, visible from space, has global-scale impacts on food security, ecosystem health, and climate. Using satellite observations this study generates long-term and sustained phytoplankton phenology (timing and magnitude of blooms) indices for the global ocean towards the effective monitoring and management of marine resources and the assessment of climate change impacts on ocean ecosystems
Andrea J. McEvoy, Angus Atkinson, Ruth L. Airs, Rachel Brittain, Ian Brown, Elaine S. Fileman, Helen S. Findlay, Caroline L. McNeill, Clare Ostle, Tim J. Smyth, Paul J. Somerfield, Karen Tait, Glen A. Tarran, Simon Thomas, Claire E. Widdicombe, E. Malcolm S. Woodward, Amanda Beesley, David V. P. Conway, James Fishwick, Hannah Haines, Carolyn Harris, Roger Harris, Pierre Hélaouët, David Johns, Penelope K. Lindeque, Thomas Mesher, Abigail McQuatters-Gollop, Joana Nunes, Frances Perry, Ana M. Queiros, Andrew Rees, Saskia Rühl, David Sims, Ricardo Torres, and Stephen Widdicombe
Earth Syst. Sci. Data, 15, 5701–5737, https://doi.org/10.5194/essd-15-5701-2023, https://doi.org/10.5194/essd-15-5701-2023, 2023
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Western Channel Observatory is an oceanographic time series and biodiversity reference site within 40 km of Plymouth (UK), sampled since 1903. Differing levels of reporting and formatting hamper the use of the valuable individual datasets. We provide the first summary database as monthly averages where comparisons can be made of the physical, chemical and biological data. We describe the database, illustrate its utility to examine seasonality and longer-term trends, and summarize previous work.
Zhongkun Hong, Di Long, Xingdong Li, Yiming Wang, Jianmin Zhang, Mohamed A. Hamouda, and Mohamed M. Mohamed
Earth Syst. Sci. Data, 15, 5281–5300, https://doi.org/10.5194/essd-15-5281-2023, https://doi.org/10.5194/essd-15-5281-2023, 2023
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Changes in ocean chlorophyll-a (Chl-a) concentration are related to ecosystem balance. Here, we present high-quality gap-filled Chl-a data in open oceans, reflecting the distribution and changes in global Chl-a concentration. Our findings highlight the efficacy of reconstructing missing satellite observations using convolutional neural networks. This dataset and model are valuable for research in ocean color remote sensing, offering data support and methodological references for related studies.
Thomas J. Ryan-Keogh, Sandy J. Thomalla, Nicolette Chang, and Tumelo Moalusi
Earth Syst. Sci. Data, 15, 4829–4848, https://doi.org/10.5194/essd-15-4829-2023, https://doi.org/10.5194/essd-15-4829-2023, 2023
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Oceanic productivity has been highlighted as an important environmental indicator of climate change in comparison to other existing metrics. However, the availability of these data to assess trends and trajectories is plagued with issues, such as application to only a single satellite reducing the time period for assessment. We have applied multiple algorithms to the longest ocean colour record to provide a record for assessing climate-change-driven trends.
Raed Halawi Ghosn, Émilie Poisson-Caillault, Guillaume Charria, Armel Bonnat, Michel Repecaud, Jean-Valery Facq, Loïc Quéméner, Vincent Duquesne, Camille Blondel, and Alain Lefebvre
Earth Syst. Sci. Data, 15, 4205–4218, https://doi.org/10.5194/essd-15-4205-2023, https://doi.org/10.5194/essd-15-4205-2023, 2023
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This article describes a long-term (2004–2022) dataset from an in situ instrumented station located in the eastern English Channel and belonging to the COAST-HF network (ILICO). It provides high temporal resolution (sub-hourly) oceanographic and meteorological measurements. The MAREL Carnot dataset can be used to conduct research in marine ecology, oceanography, and data science. It was utilized to characterize recurrent, rare, and extreme events in the coastal area.
Shungudzemwoyo P. Garaba, Michelle Albinus, Guido Bonthond, Sabine Flöder, Mario L. M. Miranda, Sven Rohde, Joanne Y. L. Yong, and Jochen Wollschläger
Earth Syst. Sci. Data, 15, 4163–4179, https://doi.org/10.5194/essd-15-4163-2023, https://doi.org/10.5194/essd-15-4163-2023, 2023
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These high-quality data document a harmful algal bloom dominated by Nodularia spumigena, a cyanobacterium that has been recurring in waters around the world, using advanced water observation technologies. We also showcase the benefits of experiments of opportunity and the issues with obtaining synoptic spatio-temporal data for monitoring water quality. The dataset can be leveraged to gain more knowledge on related blooms, develop detection algorithms and optimize future monitoring efforts.
Fabrice Stephenson, Tom Brough, Drew Lohrer, Daniel Leduc, Shane Geange, Owen Anderson, David Bowden, Malcolm R. Clark, Niki Davey, Enrique Pardo, Dennis P. Gordon, Brittany Finucci, Michelle Kelly, Diana Macpherson, Lisa McCartain, Sadie Mills, Kate Neill, Wendy Nelson, Rachael Peart, Matthew H. Pinkerton, Geoffrey B. Read, Jodie Robertson, Ashley Rowden, Kareen Schnabel, Andrew Stewart, Carl Struthers, Leigh Tait, Di Tracey, Shaun Weston, and Carolyn Lundquist
Earth Syst. Sci. Data, 15, 3931–3939, https://doi.org/10.5194/essd-15-3931-2023, https://doi.org/10.5194/essd-15-3931-2023, 2023
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Understanding the distribution of species that live at the seafloor is critical to the management of the marine environment but is lacking in many areas. Here, we showcase an atlas of seafloor biodiversity that describes the distribution of approximately 600 organisms throughout New Zealand’s vast marine realm. Each layer in the open-access atlas has been evaluated by leading experts and provides a key resource for the sustainable use of New Zealand's marine environment.
Hubert Loisel, Daniel Schaffer Ferreira Jorge, Rick A. Reynolds, and Dariusz Stramski
Earth Syst. Sci. Data, 15, 3711–3731, https://doi.org/10.5194/essd-15-3711-2023, https://doi.org/10.5194/essd-15-3711-2023, 2023
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Studies of light fields in aquatic environments require data from radiative transfer simulations that are free of measurement errors. In contrast to previously published synthetic optical databases, the present database was created by simulations covering a broad range of seawater optical properties that exhibit probability distributions consistent with a global ocean dominated by open-ocean pelagic environments. This database is intended to support ocean color science and applications.
Philippe Massicotte, Marcel Babin, Frank Fell, Vincent Fournier-Sicre, and David Doxaran
Earth Syst. Sci. Data, 15, 3529–3545, https://doi.org/10.5194/essd-15-3529-2023, https://doi.org/10.5194/essd-15-3529-2023, 2023
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The COASTlOOC oceanographic expeditions in 1997 and 1998 studied the relationship between seawater properties and biology and chemistry across the European coasts. The team collected data from 379 stations using ships and helicopters to support the development of ocean color remote-sensing algorithms. This unique and consistent dataset is still used today by researchers.
Valentin Siebert, Brivaëla Moriceau, Lukas Fröhlich, Bernd R. Schöne, Erwan Amice, Beatriz Beker, Kevin Bihannic, Isabelle Bihannic, Gaspard Delebecq, Jérémy Devesa, Morgane Gallinari, Yoan Germain, Émilie Grossteffan, Klaus Peter Jochum, Thierry Le Bec, Manon Le Goff, Céline Liorzou, Aude Leynaert, Claudie Marec, Marc Picheral, Peggy Rimmelin-Maury, Marie-Laure Rouget, Matthieu Waeles, and Julien Thébault
Earth Syst. Sci. Data, 15, 3263–3281, https://doi.org/10.5194/essd-15-3263-2023, https://doi.org/10.5194/essd-15-3263-2023, 2023
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This article presents an overview of the results of biological, chemical and physical parameters measured at high temporal resolution (sampling once and twice per week) during environmental monitoring that took place in 2021 in the Bay of Brest. We strongly believe that this dataset could be very useful for other scientists performing sclerochronological investigations, studying biogeochemical cycles or conducting various ecological research projects.
Sofie Vranken, Marine Robuchon, Stefanie Dekeyzer, Ignacio Bárbara, Inka Bartsch, Aurélie Blanfuné, Charles-François Boudouresque, Wim Decock, Christophe Destombe, Bruno de Reviers, Pilar Díaz-Tapia, Anne Herbst, Romain Julliard, Rolf Karez, Priit Kersen, Stacy A. Krueger-Hadfield, Ralph Kuhlenkamp, Akira F. Peters, Viviana Peña, Cristina Piñeiro-Corbeira, Fabio Rindi, Florence Rousseau, Jan Rueness, Hendrik Schubert, Kjersti Sjøtun, Marta Sansón, Dan Smale, Thierry Thibaut, Myriam Valero, Leen Vandepitte, Bart Vanhoorne, Alba Vergés, Marc Verlaque, Christophe Vieira, Line Le Gall, Frederik Leliaert, and Olivier De Clerck
Earth Syst. Sci. Data, 15, 2711–2754, https://doi.org/10.5194/essd-15-2711-2023, https://doi.org/10.5194/essd-15-2711-2023, 2023
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We present AlgaeTraits, a high-quality seaweed trait database. The data are structured within the framework of WoRMS and are supported by an expert editor community. With 45 175 trait records for 21 prioritised biological and ecological traits, and a taxonomic coverage of 1 745 European species, AlgaeTraits significantly advances previous efforts to provide standardised seaweed trait data. AlgaeTraits will serve as a foundation for future research on diversity and evolution of seaweeds.
Alain Lefebvre and David Devreker
Earth Syst. Sci. Data, 15, 1077–1092, https://doi.org/10.5194/essd-15-1077-2023, https://doi.org/10.5194/essd-15-1077-2023, 2023
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The Suivi Regional des Nutriments (SRN) data set includes long-term time series on marine phytoplankton and physicochemical measures in the eastern English Channel and the Southern Bight of the North Sea. These data sets should be useful for comparing contrasted coastal marine ecosystems to further knowledge about the direct and indirect effects of human pressures and environmental changes on ecosystem structure and function, including eutrophication and harmful algal bloom issues.
Jacopo Pulcinella, Enrico Nicola Armelloni, Carmen Ferrà, Giuseppe Scarcella, and Anna Nora Tassetti
Earth Syst. Sci. Data, 15, 809–820, https://doi.org/10.5194/essd-15-809-2023, https://doi.org/10.5194/essd-15-809-2023, 2023
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Deep-sea fishery in the Mediterranean Sea was historically driven by the commercial profitability of deepwater red shrimps. Understanding spatiotemporal dynamics of fishing is key to comprehensively evaluate the status of these resources and prevent stock collapse. The observed monthly fishing effort and frequency dataset released by the automatic identification system (AIS) may help researchers as well as those involved in fishery management and in the update of existing management plans.
Simone Strydom, Roisin McCallum, Anna Lafratta, Chanelle L. Webster, Caitlyn M. O'Dea, Nicole E. Said, Natasha Dunham, Karina Inostroza, Cristian Salinas, Samuel Billinghurst, Charlie M. Phelps, Connor Campbell, Connor Gorham, Rachele Bernasconi, Anna M. Frouws, Axel Werner, Federico Vitelli, Viena Puigcorbé, Alexandra D'Cruz, Kathryn M. McMahon, Jack Robinson, Megan J. Huggett, Sian McNamara, Glenn A. Hyndes, and Oscar Serrano
Earth Syst. Sci. Data, 15, 511–519, https://doi.org/10.5194/essd-15-511-2023, https://doi.org/10.5194/essd-15-511-2023, 2023
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Seagrasses are important underwater plants that provide valuable ecosystem services to humans, including mitigating climate change. Understanding the natural history of seagrass meadows across different types of environments is crucial to conserving seagrasses in the global ocean. This dataset contains data extracted from peer-reviewed publications and highlights which seagrasses have been studied and in which locations and is useful for pointing out which need further investigation.
Flavienne Bruyant, Rémi Amiraux, Marie-Pier Amyot, Philippe Archambault, Lise Artigue, Lucas Barbedo de Freitas, Guislain Bécu, Simon Bélanger, Pascaline Bourgain, Annick Bricaud, Etienne Brouard, Camille Brunet, Tonya Burgers, Danielle Caleb, Katrine Chalut, Hervé Claustre, Véronique Cornet-Barthaux, Pierre Coupel, Marine Cusa, Fanny Cusset, Laeticia Dadaglio, Marty Davelaar, Gabrièle Deslongchamps, Céline Dimier, Julie Dinasquet, Dany Dumont, Brent Else, Igor Eulaers, Joannie Ferland, Gabrielle Filteau, Marie-Hélène Forget, Jérome Fort, Louis Fortier, Martí Galí, Morgane Gallinari, Svend-Erik Garbus, Nicole Garcia, Catherine Gérikas Ribeiro, Colline Gombault, Priscilla Gourvil, Clémence Goyens, Cindy Grant, Pierre-Luc Grondin, Pascal Guillot, Sandrine Hillion, Rachel Hussherr, Fabien Joux, Hannah Joy-Warren, Gabriel Joyal, David Kieber, Augustin Lafond, José Lagunas, Patrick Lajeunesse, Catherine Lalande, Jade Larivière, Florence Le Gall, Karine Leblanc, Mathieu Leblanc, Justine Legras, Keith Lévesque, Kate-M. Lewis, Edouard Leymarie, Aude Leynaert, Thomas Linkowski, Martine Lizotte, Adriana Lopes dos Santos, Claudie Marec, Dominique Marie, Guillaume Massé, Philippe Massicotte, Atsushi Matsuoka, Lisa A. Miller, Sharif Mirshak, Nathalie Morata, Brivaela Moriceau, Philippe-Israël Morin, Simon Morisset, Anders Mosbech, Alfonso Mucci, Gabrielle Nadaï, Christian Nozais, Ingrid Obernosterer, Thimoté Paire, Christos Panagiotopoulos, Marie Parenteau, Noémie Pelletier, Marc Picheral, Bernard Quéguiner, Patrick Raimbault, Joséphine Ras, Eric Rehm, Llúcia Ribot Lacosta, Jean-François Rontani, Blanche Saint-Béat, Julie Sansoulet, Noé Sardet, Catherine Schmechtig, Antoine Sciandra, Richard Sempéré, Caroline Sévigny, Jordan Toullec, Margot Tragin, Jean-Éric Tremblay, Annie-Pier Trottier, Daniel Vaulot, Anda Vladoiu, Lei Xue, Gustavo Yunda-Guarin, and Marcel Babin
Earth Syst. Sci. Data, 14, 4607–4642, https://doi.org/10.5194/essd-14-4607-2022, https://doi.org/10.5194/essd-14-4607-2022, 2022
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This paper presents a dataset acquired during a research cruise held in Baffin Bay in 2016. We observed that the disappearance of sea ice in the Arctic Ocean increases both the length and spatial extent of the phytoplankton growth season. In the future, this will impact the food webs on which the local populations depend for their food supply and fisheries. This dataset will provide insight into quantifying these impacts and help the decision-making process for policymakers.
Rainer Kiko, Marc Picheral, David Antoine, Marcel Babin, Léo Berline, Tristan Biard, Emmanuel Boss, Peter Brandt, Francois Carlotti, Svenja Christiansen, Laurent Coppola, Leandro de la Cruz, Emilie Diamond-Riquier, Xavier Durrieu de Madron, Amanda Elineau, Gabriel Gorsky, Lionel Guidi, Helena Hauss, Jean-Olivier Irisson, Lee Karp-Boss, Johannes Karstensen, Dong-gyun Kim, Rachel M. Lekanoff, Fabien Lombard, Rubens M. Lopes, Claudie Marec, Andrew M. P. McDonnell, Daniela Niemeyer, Margaux Noyon, Stephanie H. O'Daly, Mark D. Ohman, Jessica L. Pretty, Andreas Rogge, Sarah Searson, Masashi Shibata, Yuji Tanaka, Toste Tanhua, Jan Taucher, Emilia Trudnowska, Jessica S. Turner, Anya Waite, and Lars Stemmann
Earth Syst. Sci. Data, 14, 4315–4337, https://doi.org/10.5194/essd-14-4315-2022, https://doi.org/10.5194/essd-14-4315-2022, 2022
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The term
marine particlescomprises detrital aggregates; fecal pellets; bacterioplankton, phytoplankton and zooplankton; and even fish. Here, we present a global dataset that contains 8805 vertical particle size distribution profiles obtained with Underwater Vision Profiler 5 (UVP5) camera systems. These data are valuable to the scientific community, as they can be used to constrain important biogeochemical processes in the ocean, such as the flux of carbon to the deep sea.
Autun Purser, Laura Hehemann, Lilian Boehringer, Ellen Werner, Santiago E. A. Pineda-Metz, Lucie Vignes, Axel Nordhausen, Moritz Holtappels, and Frank Wenzhoefer
Earth Syst. Sci. Data, 14, 3635–3648, https://doi.org/10.5194/essd-14-3635-2022, https://doi.org/10.5194/essd-14-3635-2022, 2022
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Within this paper we present the seafloor images, maps and acoustic camera data collected by a towed underwater research platform deployed in 20 locations across the eastern Weddell Sea, Antarctica, during the PS124 COSMUS expedition with the research icebreaker RV Polarstern in 2021. The 20 deployments highlight the great variability in seafloor structure and faunal communities present. Of key interest was the discovery of the largest fish nesting colony discovered globally to date.
Cited articles
Agüera, A., Ahn, I.-Y., Guillaumot, C., and Danis, B.: A Dynamic Energy Budget (DEB) model to describe Laternula elliptica (King, 1832) seasonal feeding and metabolism, PLOS ONE, 12, e0183848, https://doi.org/10.1371/journal.pone.0183848, 2017. a
Almada, V. C., Gonçalves, E. J., De Oliveira, R. F., and Barata, E. N.: Some features of the territories in the breeding males of the intertidal blenny Lipophrys pholis (Pisces: Blenniidae), J. Mar. Biol. Assoc. UK, 72, 187–197, https://doi.org/10.1017/S0025315400048876, 1992. a
Assis, J., Tyberghein, L., Bosch, S., Verbruggen, H., Serrão, E. A., De Clerck, O., and Tittensor, D.: Bio‐ORACLE v2.0: Extending marine data layers for bioclimatic modelling, Global Ecol. Biogeogr., 27, 277–284, https://doi.org/10.1111/geb.12693, 2018. a
Ayyildiz, H. and Altin, A.: Pelagic larval duration and early growth of striped seabream, Lithognathus mormyrus inhabiting the Gökçeada shallow waters, Turkey, Research in Marine Sciences, 6, 883–895, 2021. a
Bates, A. E., Helmuth, B., Burrows, M. T., Duncan, M. I., Garrabou, J., Guy-Haim, T., Lima, F., Queiros, A. M., Seabra, R., Marsh, R., Belmaker, J., Bensoussan, N., Dong, Y., Mazaris, A. D., Smale, D., Wahl, M., and Rilov, G.: Biologists ignore ocean weather at their peril, Nature, 560, 299–301, https://doi.org/10.1038/d41586-018-05869-5, 2018. a
Bianchi, Nike, C. and Morri, C.: Global sea warming and “tropicalization” of the Mediterranean Sea: biogeographic and ecological aspects, Biogeographia – The Journal of Integrative Biogeography, 24, https://doi.org/10.21426/B6110129, 2003. a
Bograd, S. J., Checkley, D. A., and Wooster, W. S.: CalCOFI: a half century of physical, chemical, and biological research in the California Current System, Deep-Sea Res. Pt. II, 50, 2349–2353, https://doi.org/10.1016/S0967-0645(03)00122-X, 2003. a
Bouveyron, C., Celeux, G., Murphy, T. B., and Raftery, A. E. (Eds.): Model-based clustering and classification for data science: with applications in R, Cambridge series in statistical and probabilistic mathematics, Cambridge University Press, Cambridge, New York, NY, ISBN 978-1-108-49420-5, 2019. a
Brady, M. E., Chione, A. M., and Armstrong, J. B.: Missing pieces in the full annual cycle of fish ecology: a systematic review of the phenology of freshwater fish research, bioRxiv [preprint], https://doi.org/10.1101/2020.11.24.395665, 2020. a
Brandl, S. J., Goatley, C. H. R., Bellwood, D. R., and Tornabene, L.: The hidden half: ecology and evolution of cryptobenthic fishes on coral reefs, Biol. Rev., 93, 1846–1873, https://doi.org/10.1111/brv.12423, 2018. a
Catalan, I. A., Dunand, A., Alvarez, I., Alos, J., Colinas, N., and Nash, R. D.: An evaluation of sampling methodology for assessing settlement of temperate fish in seagrass meadows, Mediterr. Mar. Sci., 15, 338, https://doi.org/10.12681/mms.539, 2014. a, b, c, d
Cattano, C., Calò, A., Di Franco, A., Firmamento, R., Quattrocchi, F., Sdiri, K., Guidetti, P., and Milazzo, M.: Ocean acidification does not impair predator recognition but increases juvenile growth in a temperate wrasse off CO2 seeps, Mar. Environ. Res., 132, 33–40, https://doi.org/10.1016/j.marenvres.2017.10.013, 2017. a
Cheminee, A., Pastor, J., Bianchimani, O., Thiriet, P., Sala, E., Cottalorda, J.-M., Dominici, J.-M., Lejeune, P., and Francour, P.: Juvenile fish assemblages in temperate rocky reefs are shaped by the presence of macro-algae canopy and its three-dimensional structure, Scientific Reports, 7, 14638, https://doi.org/10.1038/s41598-017-15291-y, 2017. a
Cheminee, A., Le Direach, L., Rouanet, E., Astruch, P., Goujard, A., Blanfune, A., Bonhomme, D., Chassaing, L., Jouvenel, J.-Y., Ruitton, S., Thibaut, T., and Harmelin-Vivien, M.: All shallow coastal habitats matter as nurseries for Mediterranean juvenile fish, Scientific Reports, 11, 14631, https://doi.org/10.1038/s41598-021-93557-2, 2021. a
Coll, M., Piroddi, C., Steenbeek, J., Kaschner, K., Ben Rais Lasram, F., Aguzzi, J., Ballesteros, E., Bianchi, C. N., Corbera, J., Dailianis, T., Danovaro, R., Estrada, M., Froglia, C., Galil, B. S., Gasol, J. M., Gertwagen, R., Gil, J., Guilhaumon, F., Kesner-Reyes, K., Kitsos, M.-S., Koukouras, A., Lampadariou, N., Laxamana, E., Lopez-Fe de la Cuadra, C. M., Lotze, H. K., Martin, D., Mouillot, D., Oro, D., Raicevich, S., Rius-Barile, J., Saiz-Salinas, J. I., San Vicente, C., Somot, S., Templado, J., Turon, X., Vafidis, D., Villanueva, R., and Voultsiadou, E.: The Biodiversity of the Mediterranean Sea: Estimates, Patterns, and Threats, PLOS ONE, 5, e11842, https://doi.org/10.1371/journal.pone.0011842, 2010. a
Conover, D. O.: Seasonality and the scheduling of life history at different latitudes, J. Fish Biol., 41, 161–178, https://doi.org/10.1111/j.1095-8649.1992.tb03876.x, 1992. a
Cuadros, A., Cheminee, A., Thiriet, P., Moranta, J., Vidal, E., Sintes, J., Sagrista, N., and Cardona, L.: The three-dimensional structure of Cymodocea nodosa meadows shapes juvenile fish assemblages at Fornells Bay (Minorca Island), Regional Studies in Marine Science, 14, 93–101, https://doi.org/10.1016/j.rsma.2017.05.011, 2017. a
Cuadros, A., Moranta, J., Cardona, L., Thiriet, P., Francour, P., Vidal, E., Sintes, J., and Cheminee, A.: Juvenile fish in Cystoseira forests: influence of habitat complexity and depth on fish behaviour and assemblage composition, Mediterr. Mar. Sci., 20, 380–392, https://doi.org/10.12681/mms.18857, 2019. a
Curtis, J. M. R. and Vincent, A. C. J.: Life history of an unusual marine fish: survival, growth and movement patterns of Hippocampus guttulatus Cuvier 1829, J. Fish Biol., 68, 707–733, https://doi.org/10.1111/j.0022-1112.2006.00952.x, 2006. a
Cushing, D. H.: Plankton Production and Year-class Strength in Fish Populations: an Update of the Match/Mismatch Hypothesis, in: Advances in Marine Biology, vol. 26, pp. 249–293, Elsevier, ISBN 978-0-12-026126-0, https://doi.org/10.1016/S0065-2881(08)60202-3, 1990. a
Dahlke, F. T., Wohlrab, S., Butzin, M., and Pörtner, H.-O.: Thermal bottlenecks in the life cycle define climate vulnerability of fish, Science, 369, 65–70, https://doi.org/10.1126/science.aaz3658, 2020. a
Daskalaki, E., Koufalis, E., Dimarchopoulou, D., and Tsikliras, A. C.: Scientific progress made towards bridging the knowledge gap in the biology of Mediterranean marine fishes, PLOS ONE, 17, e0277383, https://doi.org/10.1371/journal.pone.0277383, 2022. a
Diaz-Gil, C., Grau, A., Grau, A. M., Palmer, M., Cabrera, R., Jordà, G., and Catalan, I. A.: Changes in the juvenile fish assemblage of a Mediterranean shallow Posidonia oceanica seagrass nursery area after half century, Mediterr. Mar. Sci., 20, 603, https://doi.org/10.12681/mms.19510, 2019. a
Di Franco, A. and Guidetti, P.: Patterns of variability in early-life traits of fishes depend on spatial scale of analysis, Biol. Letters, 7, 454–456, https://doi.org/10.1098/rsbl.2010.1149, 2011. a, b
Di Franco, A., Calò, A., Pennetta, A., De Benedetto, G., Planes, S., and Guidetti, P.: Dispersal of larval and juvenile seabream: Implications for Mediterranean marine protected areas, Biol. Conserv., 192, 361–368, https://doi.org/10.1016/j.biocon.2015.10.015, 2015. a, b
Di Stefano, M., Legrand, T., Di Franco, A., Nerini, D., and Rossi, V.: Insights into the spatio‐temporal variability of spawning in a territorial coastal fish by combining observations, modelling and literature review, Fish. Oceanogr., 32, 70–90, https://doi.org/10.1111/fog.12609, 2022. a, b
Di Stefano, M., Nerini, D., Alvarez Ellacuria, I., Ardizzone, G., Astruch, P., Basterretxea, G., Blanfune, A., Bonhomme, D., Calò, A., Catalan, I., Cattano, C., Cheminee, A., Crec'Hriou, R., Cuadros, A., Di Franco, A., Diaz-Gil, C., Estaque, T., Faillettaz, R., Felix-Hackradt, F. C., Garcia-Charton, J. A., Guidetti, P., Guilloux, L., Harmelin, J.-G., Harmelin-Vivien, M., Hidalgo, M., Hinz, H., Irisson, J.-O., La Mesa, G., Le Direach, L., Lenfant, P., Macpherson, E., Matić-Skoko, S., Mercader, M., Milazzo, M., Monfort, T., Moranta, J., Muntoni, M., Murenu, M., Nunez, L., Olivar, M. P., Pastor, J., Perez-Ruzafa, a., Planes, S., Raventos, N., Richaume, J., Rouanet, E., Roussel, E., Ruitton, S., Sabates, A., Thibaut, T., Ventura, D., Vigliola, L., Vrdoljak, D., and Rossi, V.: Compilation of locations, larval durations and dates of spawning and settlement for coastal fishes in the Mediterranean Sea, SEANOE [data set], https://doi.org/10.17882/91148, 2023. a, b
Donelson, J. M., Sunday, J. M., Figueira, W. F., Gaitan-Espitia, J. D., Hobday, A. J., Johnson, C. R., Leis, J. M., Ling, S. D., Marshall, D., Pandolfi, J. M., Pecl, G., Rodgers, G. G., Booth, D. J., and Munday, P. L.: Understanding interactions between plasticity, adaptation and range shifts in response to marine environmental change, Philos. T. Roy. Soc. B, 374, 20180186, https://doi.org/10.1098/rstb.2018.0186, 2019. a
Druon, J.-N., Fiorentino, F., Murenu, M., Knittweis, L., Colloca, F., Osio, C., Merigot, B., Garofalo, G., Mannini, A., Jadaud, A., Sbrana, M., Scarcella, G., Tserpes, G., Peristeraki, P., Carlucci, R., and Heikkonen, J.: Modelling of European hake nurseries in the Mediterranean Sea: An ecological niche approach, Prog. Oceanogr., 130, 188–204, https://doi.org/10.1016/j.pocean.2014.11.005, 2015. a
Dubois, M., Rossi, V., Ser-Giacomi, E., Arnaud-Haond, S., Lopez, C., and Hernandez-Garcia, E.: Linking basin-scale connectivity, oceanography and population dynamics for the conservation and management of marine ecosystems: Large-scale connectivity and management of marine ecosystems, Global Ecol. Biogeogr., 25, 503–515, https://doi.org/10.1111/geb.12431, 2016. a, b, c, d
Edgar, G. J., Barrett, N. S., and Morton, A. J.: Biases associated with the use of underwater visual census techniques to quantify the density and size-structure of fish populations, J. Exp. Mar. Biol. Ecol., 308, 269–290, https://doi.org/10.1016/j.jembe.2004.03.004, 2004. a
Edgar, G. J., Stuart-Smith, R. D., Willis, T. J., Kininmonth, S., Baker, S. C., Banks, S., Barrett, N. S., Becerro, M. A., Bernard, A. T. F., Berkhout, J., Buxton, C. D., Campbell, S. J., Cooper, A. T., Davey, M., Edgar, S. C., Försterra, G., Galvan, D. E., Irigoyen, A. J., Kushner, D. J., Moura, R., Parnell, P. E., Shears, N. T., Soler, G., Strain, E. M. A., and Thomson, R. J.: Global conservation outcomes depend on marine protected areas with five key features, Nature, 506, 216–220, https://doi.org/10.1038/nature13022, 2014. a
Faillettaz, R., Voue, R., Crec’hriou, R., Garsi, L., Lecaillon, G., Agostini, S., Lenfant, P., and Irisson, J.: Spatio-temporal patterns of larval fish settlement in the northwestern Mediterranean Sea, Mar. Ecol. Prog. Ser., 650, 153–173, https://doi.org/10.3354/meps13191, 2020. a
Ferreira, A. S. A., Neuheimer, A. B., and Durant, J. M.: Impacts of the match-mismatch hypothesis across three trophic levels – a case study in the North Sea, ICES J. Mar. Sci., 80, 308–316, https://doi.org/10.1093/icesjms/fsac237, 2023. a
Fisher, N. I.: Statistical Analysis of Circular Data, Cambridge University Press, Cambridge, ISBN 978-0-521-56890-6, https://doi.org/10.1017/CBO9780511564345, 1993. a
Garcia-Monteiro, S., Sobrino, J., Julien, Y., Sòria, G., and Skokovic, D.: Surface Temperature trends in the Mediterranean Sea from MODIS data during years 2003–2019, Regional Studies in Marine Science, 49, 102086, https://doi.org/10.1016/j.rsma.2021.102086, 2022. a
Giacomello, E. and Rasotto, M. B.: Sexual dimorphism and male mating success in the tentacled blenny, Parablennius tentacularis (Teleostei: Blenniidae), Mar. Biol., 147, 1221–1228, https://doi.org/10.1007/s00227-005-0023-4, 2005. a
Green, B. S. and Fisher, R.: Temperature influences swimming speed, growth and larval duration in coral reef fish larvae, J. Exp. Mar. Biol. Ecol., 299, 115–132, https://doi.org/10.1016/j.jembe.2003.09.001, 2004. a
Green, B. S., Mapstone, B. D., Carlos, G., Begg, G. A., and Nielsen, J. L., eds.: Tropical Fish Otoliths: Information for Assessment, Management and Ecology, in: Reviews: Methods and Technologies in Fish Biology and Fisheries, vol. 11, edited by: Green, B. S., Mapstone, B. D., Carlos, G., Begg, G. A., Springer Netherlands, Dordrecht, ISBN 978-1-4020-5775-5, https://doi.org/10.1007/978-1-4020-5775-5, 2009. a
Heino, M., Baulier, L., Boukal, D. S., Ernande, B., Johnston, F. D., Mollet, F. M., Pardoe, H., Therkildsen, N. O., Uusi-Heikkilä, S., Vainikka, A., Arlinghaus, R., Dankel, D. J., Dunlop, E. S., Eikeset, A. M., Enberg, K., Engelhard, G. H., Jørgensen, C., Laugen, A. T., Matsumura, S., Nussle, S., Urbach, D., Whitlock, R., Rijnsdorp, A. D., and Dieckmann, U.: Can fisheries-induced evolution shift reference points for fisheries management?, ICES J. Mar. Sci., 70, 707–721, https://doi.org/10.1093/icesjms/fst077, 2013. a
Hernández-Carrasco, I., López, C., Orfila, A., and Hernández-García, E.: Lagrangian transport in a microtidal coastal area: the Bay of Palma, island of Mallorca, Spain, Nonlin. Processes Geophys., 20, 921–933, https://doi.org/10.5194/npg-20-921-2013, 2013. a
Hidalgo, M., Kaplan, D. M., Kerr, L. A., Watson, J. R., Paris, C. B., and Browman, H. I.: Advancing the link between ocean connectivity, ecological function and management challenges, ICES J. Mar. Sci., 74, 1702–1707, https://doi.org/10.1093/icesjms/fsx112, 2017. a
Hidalgo, M., Rossi, V., Monroy, P., Ser‐Giacomi, E., Hernandez‐Garcia, E., Guijarro, B., Massuti, E., Alemany, F., Jadaud, A., Perez, J. L., and Reglero, P.: Accounting for ocean connectivity and hydroclimate in fish recruitment fluctuations within transboundary metapopulations, Ecol. Appl., 29, e01913, https://doi.org/10.1002/eap.1913, 2019. a, b
Kooijman, S.: Metabolic acceleration in animal ontogeny: An evolutionary perspective, J. Sea Res., 94, 128–137, https://doi.org/10.1016/j.seares.2014.06.005, 2014. a
Kooijman, S. A., Lika, K., Augustine, S., Marn, N., and Kooi, B. W.: The energetic basis of population growth in animal kingdom, Ecol. Model., 428, 109055, https://doi.org/10.1016/j.ecolmodel.2020.109055, 2020. a, b
Kooijman, S. A. L. M., Pecquerie, L., Augustine, S., and Jusup, M.: Scenarios for acceleration in fish development and the role of metamorphosis, J. Sea Res., 66, 419–423, https://doi.org/10.1016/j.seares.2011.04.016, 2011. a
Lagunes, M. J., Berline, L., Di Stefano, M., and Rossi, V.: Integrating Individual-Based Models to improve our understanding of the impacts of environmental conditions on fish early-life stages, Ecol. Model., submitted, 2024. a
Legrand, T., Di Franco, A., Ser-Giacomi, E., Calo, A., and Rossi, V.: A multidisciplinary analytical framework to delineate spawning areas and quantify larval dispersal in coastal fish, Mar. Environ. Res., 151, 104761, https://doi.org/10.1016/j.marenvres.2019.104761, 2019. a, b
Legrand, T., Chenuil, A., Ser-Giacomi, E., Arnaud-Haond, S., Bierne, N., and Rossi, V.: Spatial coalescent connectivity through multi-generation dispersal modelling predicts gene flow across marine phyla, Nat. Commun., 13, 5861, https://doi.org/10.1038/s41467-022-33499-z, 2022. a, b
Lejeusne, C., Chevaldonne, P., Pergent-Martini, C., Boudouresque, C. F., and Perez, T.: Climate change effects on a miniature ocean: the highly diverse, highly impacted Mediterranean Sea, Trends Ecol. Evol., 25, 250–260, https://doi.org/10.1016/j.tree.2009.10.009, 2010. a
Lester, S. E., Halpern, B. S., Grorud-Colvert, K., Lubchenco, J., Ruttenberg, B. I., Gaines, S. D., Airame, S., and Warner, R. R.: Biological effects within no-take marine reserves: a global synthesis, Mar. Ecol. Prog. Ser., 384, 33–46, https://doi.org/10.3354/meps08029, 2009. a
Lika, K., Kooijman, S. A., and Papandroulakis, N.: Metabolic acceleration in Mediterranean Perciformes, J. Sea Res., 94, 37–46, https://doi.org/10.1016/j.seares.2013.12.012, 2014. a
Lionello, P. and Scarascia, L.: The relation between climate change in the Mediterranean region and global warming, Reg. Environ. Change, 18, 1481–1493, https://doi.org/10.1007/s10113-018-1290-1, 2018. a
Liu, X., Dunne, J. P., Stock, C. A., Harrison, M. J., Adcroft, A., and Resplandy, L.: Simulating Water Residence Time in the Coastal Ocean: A Global Perspective, Geophys. Res. Lett., 46, 13910–13919, https://doi.org/10.1029/2019GL085097, 2019. a
Llopiz, J., Cowen, R., Hauff, M., Ji, R., Munday, P., Muhling, B., Peck, M., Richardson, D., Sogard, S., and Sponaugle, S.: Early Life History and Fisheries Oceanography: New Questions in a Changing World, Oceanography, 27, 26–41, https://doi.org/10.5670/oceanog.2014.84, 2014. a
Macpherson, E. and Raventos, N.: Relationship between pelagic larval duration and geographic distribution of Mediterranean littoral fishes, Mar. Ecol. Prog. Ser., 327, 257–265, https://doi.org/10.3354/meps327257, 2006. a, b, c, d
Marbà, N., Jordà, G., Agusti, S., Girard, C., and Duarte, C. M.: Footprints of climate change on Mediterranean Sea biota, Frontiers in Marine Science, 2, 56, https://doi.org/10.3389/fmars.2015.00056, 2015. a
Marques, G. M., Augustine, S., Lika, K., Pecquerie, L., Domingos, T., and Kooijman, S. A. L. M.: The AmP project: Comparing species on the basis of dynamic energy budget parameters, PLOS Comput. Biol., 14, e1006100, https://doi.org/10.1371/journal.pcbi.1006100, 2018. a, b, c
Marshall, D. J., Gaines, S. D., Warner, R. R., Barneche, D. R., and Bode, M.: Underestimating the benefits of marine protected areas for the replenishment of fished populations, Front. Ecol. Environ., 17, 407–413, https://doi.org/10.1002/fee.2075, 2019. a
Matić-Skoko, S., Vrdoljak, D., Uvanović, H., Pavičić, M., Tutman, P., and Bojanić Varezić, D.: Early evidence of a shift in juvenile fish communities in response to conditions in nursery areas, Scientific Reports, 10, 21078, https://doi.org/10.1038/s41598-020-78181-w, 2020. a
MedPAN and SPA/RAC: MAPAMED, the database of MArine Protected Areas in the MEDiterranean, 2019 edition, version 2, https://www.mapamed.org/ (last access: 19 August 2024), 2021. a
Mentges, A., Blowes, S. A., Hodapp, D., Hillebrand, H., and Chase, J. M.: Effects of site‐selection bias on estimates of biodiversity change, Conserv. Biol., 35, 688–698, https://doi.org/10.1111/cobi.13610, 2021. a
Mercader, M., Blazy, C., Di Pane, J., Devissi, C., Merciere, A., Cheminee, A., Thiriet, P., Pastor, J., Crec'hriou, R., Verdoit‐Jarraya, M., and Lenfant, P.: Is artificial habitat diversity a key to restoring nurseries for juvenile coastal fish? Ex situ experiments on habitat selection and survival of juvenile seabreams, Restor. Ecol., 27, 1155–1165, https://doi.org/10.1111/rec.12948, 2019. a
Mouine, N., Francour, P., Ktari, M.-H., and Chakroun-Marzouk, N.: Reproductive biology of four Diplodus species Diplodus vulgaris, D. annularis, D. sargus sargus and D. puntazzo (Sparidae) in the Gulf of Tunis (central Mediterranean), J. Mar. Biol. Assoc. UK, 92, 623–631, https://doi.org/10.1017/S0025315411000798, 2012. a
Myers, N., Mittermeier, R. A., Mittermeier, C. G., da Fonseca, G. A. B., and Kent, J.: Biodiversity hotspots for conservation priorities, Nature, 403, 853–858, https://doi.org/10.1038/35002501, 2000. a
Olivar, M. P., Sabates, A., Alemany, F., Balbin, R., Fernandez de Puelles, M. L., and Torres, A. P.: Diel-depth distributions of fish larvae off the Balearic Islands (western Mediterranean) under two environmental scenarios, J. Marine Syst., 138, 127–138, https://doi.org/10.1016/j.jmarsys.2013.10.009, 2014. a
Pankhurst, N. W. and Munday, P. L.: Effects of climate change on fish reproduction and early life history stages, Mar. Freshwater Res., 62, 1015, https://doi.org/10.1071/MF10269, 2011. a
Paris, C. B. and Cowen, R. K.: Direct evidence of a biophysical retention mechanism for coral reef fish larvae, Limnol. Oceanogr., 49, 1964–1979, https://doi.org/10.4319/lo.2004.49.6.1964, 2004. a
Pauly, D. and Pullin, R. S. V.: Hatching time in spherical, pelagic, marine fish eggs in response to temperature and egg size, Environ. Biol. Fish., 22, 261–271, https://doi.org/10.1007/BF00004892, 1988. a
Pepin, P., Robert, D., Bouchard, C., Dower, J. F., Falardeau, M., Fortier, L., Jenkins, G. P., Leclerc, V., Levesque, K., Llopiz, J. K., Meekan, M. G., Murphy, H. M., Ringuette, M., Sirois, P., and Sponaugle, S.: Once upon a larva: revisiting the relationship between feeding success and growth in fish larvae, ICES J. Mar. Sci., 72, 359–373, https://doi.org/10.1093/icesjms/fsu201, 2014. a
Pineda, J., Hare, J. A., and Sponaugle, S.: Larval Transport and Dispersal in the Coastal Ocean and Consequences for Population Connectivity, Oceanography, 20, 22–39, 2007. a
Raventos, N. and Macpherson, E.: Planktonic larval duration and settlement marks on the otoliths of Mediterranean littoral fishes, Mar. Biol., 138, 1115–1120, https://doi.org/10.1007/s002270000535, 2001. a
Raventos, N., Torrado, H., Arthur, R., Alcoverro, T., and Macpherson, E.: Temperature reduces fish dispersal as larvae grow faster to their settlement size, J. Anim. Ecol., 90, 1419–1432, https://doi.org/10.1111/1365-2656.13435, 2021. a, b
Rose, K. A., Holsman, K., Nye, J. A., Markowitz, E. H., Banha, T. N. S., Bednaršek, N., Bueno-Pardo, J., Deslauriers, D., Fulton, E. A., Huebert, K. B., Huret, M., Ito, S. I., Koenigstein, S., Li, L., Moustahfid, H., Muhling, B. A., Neubauer, P., Paula, J. R., Siddon, E. C., Skogen, M. D., Spencer, P. D., Van Denderen, P. D., Van Der Meeren, G. I., and Peck, M. A.: Advancing bioenergetics-based modeling to improve climate change projections of marine ecosystems, Mar. Ecol. Prog. Ser., 732, 193–221, https://doi.org/10.3354/meps14535, 2024. a
Rubio, A., Hernandez-Carrasco, I., Orfila, A., Gonzalez, M., Reyes, E., Corgnati, L., Berta, M., Griffa, A., and Mader, J.: Section 2.8: A Lagrangian approach to monitor local particle retention conditions in coastal areas, J. Oper. Oceanogr., 13, S1–S172, https://doi.org/10.1080/1755876X.2020.1785097, 2020. a
Soto-Navarro, J., Jorda, G., Amores, A., Cabos, W., Somot, S., Sevault, F., Macias, D., Djurdjevic, V., Sannino, G., Li, L., and Sein, D.: Evolution of Mediterranean Sea water properties under climate change scenarios in the Med-CORDEX ensemble, Clim. Dynam., 54, 2135–2165, https://doi.org/10.1007/s00382-019-05105-4, 2020. a
Spalding, M. D., Fox, H. E., Allen, G. R., Davidson, N., Ferdana, Z. A., Finlayson, M., Halpern, B. S., Jorge, M. A., Lombana, A., Lourie, S. A., Martin, K. D., McManus, E., Molnar, J., Recchia, C. A., and Robertson, J.: Marine Ecoregions of the World: A Bioregionalization of Coastal and Shelf Areas, BioScience, 57, 573–583, https://doi.org/10.1641/B570707, 2007. a
Suau, P. and Vives, F.: Contribucion al estudio del salmonete de fango (Mullus barbatus L.) del Mediterraneo occidental, Invest. Pesq., 9, 97–118, 1957. a
Teletchea, S. and Teletchea, F.: STOREFISH 2.0: a database on the reproductive strategies of teleost fishes, Database, 2020, baaa095, https://doi.org/10.1093/database/baaa095, 2020. a
Torrado, H., Mourre, B., Raventos, N., Carreras, C., Tintore, J., Pascual, M., and Macpherson, E.: Impact of individual early life traits in larval dispersal: A multispecies approach using backtracking models, Prog. Oceanogr., 192, 102518, https://doi.org/10.1016/j.pocean.2021.102518, 2021. a
Tsikliras, A. C., Antonopoulou, E., and Stergiou, K. I.: Spawning period of Mediterranean marine fishes, Rev. Fish Biol. Fisher., 20, 499–538, https://doi.org/10.1007/s11160-010-9158-6, 2010. a, b, c, d
Tsikliras, A. C., Dinouli, A., Tsiros, V.-Z., and Tsalkou, E.: The Mediterranean and Black Sea Fisheries at Risk from Overexploitation, PLOS ONE, 10, e0121188, https://doi.org/10.1371/journal.pone.0121188, 2015. a
Tyberghein, L., Verbruggen, H., Pauly, K., Troupin, C., Mineur, F., and De Clerck, O.: Bio-ORACLE: a global environmental dataset for marine species distribution modelling, Global Ecol. Biogeogr., 21, 272–281, https://doi.org/10.1111/j.1466-8238.2011.00656.x, 2012. a
van der Meer, J. and Kooijman, S. B. A.: Inference on energetics of deep-sea fish that cannot be aged: The case of the hagfish, J. Sea Res., 94, 138–143, https://doi.org/10.1016/j.seares.2014.07.007, 2014. a
Vasbinder, K. and Ainsworth, C.: Early life history growth in fish reflects consumption-mortality tradeoffs, Fish. Res., 227, 105538, https://doi.org/10.1016/j.fishres.2020.105538, 2020. a, b
Vigliola, L.: Contrôle et regulation du recrutement des Sparidae (Poissons, Teleosteens) en Mediterranee: importance des processus pre- et post-installation benthique, PhD thesis, Universite de la Mediterranee (Aix Marseille II), Centre d'Oceanologie de Marseille, https://theses.fr/1998AIX22082 (last access: 25 August 2024), 1998. a
Vigo, M., Hermoso, V., Navarro, J., Sala-Coromina, J., Company, J. B., and Giakoumi, S.: Dynamic marine spatial planning for conservation and fisheries benefits, Fish Fish., 25, 630–646, https://doi.org/10.1111/faf.12830, 2024. a
von Bertalanffy, L.: A quantitative theory of organic growth: inquiries on growth laws II, Hum. Biol., 10, 181–213, 1938. a
White, J. W., Carr, M. H., Caselle, J. E., Washburn, L., Woodson, C. B., Palumbi, S. R., Carlson, P. M., Warner, R. R., Menge, B. A., Barth, J. A., Blanchette, C. A., Raimondi, P. T., and Milligan, K.: Connectivity, Dispersal, and Recruitment: Connecting Benthic Communities and the Coastal Ocean, Oceanography, 32, 50–59, https://doi.org/10.5670/oceanog.2019.310, 2019. a
Wilkinson, M. D., Dumontier, M., Aalbersberg, I. J., Appleton, G., Axton, M., Baak, A., Blomberg, N., Boiten, J.-W., da Silva Santos, L. B., Bourne, P. E., Bouwman, J., Brookes, A. J., Clark, T., Crosas, M., Dillo, I., Dumon, O., Edmunds, S., Evelo, C. T., Finkers, R., Gonzalez-Beltran, A., Gray, A. J., Groth, P., Goble, C., Grethe, J. S., Heringa, J., 't Hoen, P. A., Hooft, R., Kuhn, T., Kok, R., Kok, J., Lusher, S. J., Martone, M. E., Mons, A., Packer, A. L., Persson, B., Rocca-Serra, P., Roos, M., van Schaik, R., Sansone, S.-A., Schultes, E., Sengstag, T., Slater, T., Strawn, G., Swertz, M. A., Thompson, M., van der Lei, J., van Mulligen, E., Velterop, J., Waagmeester, A., Wittenburg, P., Wolstencroft, K., Zhao, J., and Mons, B.: The FAIR Guiding Principles for scientific data management and stewardship, Scientific Data, 3, 160018, https://doi.org/10.1038/sdata.2016.18, 2016. a
Wisz, M. S., Hijmans, R. J., Li, J., Peterson, A. T., Graham, C. H., Guisan, A., and NCEAS Predicting Species Distributions Working Group: Effects of sample size on the performance of species distribution models, Divers. Distrib., 14, 763–773, https://doi.org/10.1111/j.1472-4642.2008.00482.x, 2008. a
Short summary
We build a compilation of early-life dispersal traits for coastal fish species. The database contains over 110 000 entries collected from 1993 to 2021 in the western Mediterranean. All observations are harmonized to provide information on dates and locations of spawning and settlement, along with pelagic larval durations. When applicable, missing data are reconstructed from dynamic energy budget theory. Statistical analyses reveal sampling biases across taxa, space and time.
We build a compilation of early-life dispersal traits for coastal fish species. The database...
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