Articles | Volume 15, issue 7
https://doi.org/10.5194/essd-15-2711-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/essd-15-2711-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Data description paper
| 
04 Jul 2023
Data description paper |
| 04 Jul 2023
| 04 Jul 2023
AlgaeTraits: a trait database for (European) seaweeds
Biology Department, Research Group Phycology, Ghent University, Ghent,
9000, Belgium
Flanders Marine Institute (VLIZ), InnovOcean Campus, Jacobsenstraat 1,
Oostende, 8400, Belgium
Marine Robuchon
Institut de Systématique, Évolution, Biodiversité (ISYEB),
Muséum National d'Histoire Naturelle, Centre National de la Recherche
Scientifique, Sorbonne Université, École Pratique des Hautes Études,
Université des Antilles, Paris, 75005, France
Centre d'Écologie et des Sciences de la Conservation (CESCO),
Muséum National d'Histoire Naturelle, Centre National de la Recherche
Scientifique, Sorbonne Université, Paris, 75005, France
Joint Research Centre (JRC) of the European Commission, Directorate
for Sustainable Resources, Ispra (VA), 21027, Italy
Stefanie Dekeyzer
Biology Department, Research Group Phycology, Ghent University, Ghent,
9000, Belgium
Ignacio Bárbara
BIOCOST Research Group, Faculdade de Ciencias, Universidade da
Coruña, A Coruña, 15071, Spain
Inka Bartsch
Alfred Wegener Institute, Helmholtz Centre for Polar and Marine
Research, 27570 Bremerhaven, Germany
Aurélie Blanfuné
CNRS, IRD,
Mediterranean Institute of Oceanography (MIO), Aix-Marseille University and Université de Toulon, Marseille, UM 110, France
Charles-François Boudouresque
CNRS, IRD,
Mediterranean Institute of Oceanography (MIO), Aix-Marseille University and Université de Toulon, Marseille, UM 110, France
Wim Decock
Biology Department, Research Group Phycology, Ghent University, Ghent,
9000, Belgium
Christophe Destombe
IRL 3614, CNRS, SU, UACH, PUC, Station Biologique de Roscoff, Place
Georges Teissier, Roscoff, 29688, France
Bruno de Reviers
Institut de Systématique, Évolution, Biodiversité (ISYEB),
Muséum National d'Histoire Naturelle, Centre National de la Recherche
Scientifique, Sorbonne Université, École Pratique des Hautes Études,
Université des Antilles, Paris, 75005, France
Pilar Díaz-Tapia
BIOCOST Research Group, Faculdade de Ciencias, Universidade da
Coruña, A Coruña, 15071, Spain
Centro Nacional Instituto Español de Oceanografía
(IEO-CSIC), Centro Oceanográfico de A Coruña, A Coruña, 15001,
Spain
Anne Herbst
Department Maritime Systeme, Interdisziplinäre Fakultät,
18057 Rostock, Germany
Romain Julliard
Centre d'Écologie et des Sciences de la Conservation (CESCO),
Muséum National d'Histoire Naturelle, Centre National de la Recherche
Scientifique, Sorbonne Université, Paris, 75005, France
Rolf Karez
State Agency for Agriculture, Environment and Rural Areas
Schleswig-Holstein, 24220 Flintbek, Germany
Priit Kersen
Plant Protection and Fertilisers Department, Agriculture and Food Board, Teaduse 2, Saku, Harjumaa, 75501, Estonia
Stacy A. Krueger-Hadfield
Department of Biology, University of Alabama at Birmingham,
Birmingham, Alabama 35294, USA
Ralph Kuhlenkamp
Phycomarin, 21149 Hamburg, Germany
Akira F. Peters
Bezhin Rosko, Santec, 29250, France
Viviana Peña
BIOCOST Research Group, Faculdade de Ciencias, Universidade da
Coruña, A Coruña, 15071, Spain
Cristina Piñeiro-Corbeira
BIOCOST Research Group, Faculdade de Ciencias, Universidade da
Coruña, A Coruña, 15071, Spain
Fabio Rindi
Dipartimento di Scienze della Vita e dell'Ambiente, Università
Politecnica delle Marche, Via Brecce Bianche, Ancona, 60131, Italy
Florence Rousseau
Centre d'Écologie et des Sciences de la Conservation (CESCO),
Muséum National d'Histoire Naturelle, Centre National de la Recherche
Scientifique, Sorbonne Université, Paris, 75005, France
Jan Rueness
Department of Biosciences, University of Oslo, Oslo, 0315, Norway
Hendrik Schubert
Institute for Biosciences, University Rostock, Rostock, 18051,
Germany
Kjersti Sjøtun
Department of Biological Sciences, University of Bergen, Bergen,
5020, Norway
Marta Sansón
Departamento de Botánica, Ecología y Fisiología
Vegetal, Universidad de La Laguna, La Laguna, 38200, Canary Islands, Spain
Dan Smale
Marine Biological Association of the United Kingdom, Citadel Hill,
Plymouth, PL1 2PB, UK
Thierry Thibaut
CNRS, IRD,
Mediterranean Institute of Oceanography (MIO), Aix-Marseille University and Université de Toulon, Marseille, UM 110, France
Myriam Valero
IRL 3614, CNRS, SU, UACH, PUC, Station Biologique de Roscoff, Place
Georges Teissier, Roscoff, 29688, France
Leen Vandepitte
Biology Department, Research Group Phycology, Ghent University, Ghent,
9000, Belgium
Bart Vanhoorne
Biology Department, Research Group Phycology, Ghent University, Ghent,
9000, Belgium
Alba Vergés
Marine Resources and Biodiversity Research Group (GRMAR), Institute
of Aquatic Ecology, University of Girona, Girona, 17003, Spain
Marc Verlaque
CNRS, IRD,
Mediterranean Institute of Oceanography (MIO), Aix-Marseille University and Université de Toulon, Marseille, UM 110, France
Christophe Vieira
Research Institute for Basic Sciences, Jeju National University,
Jeju, 63243, South Korea
Line Le Gall
Institut de Systématique, Évolution, Biodiversité (ISYEB),
Muséum National d'Histoire Naturelle, Centre National de la Recherche
Scientifique, Sorbonne Université, École Pratique des Hautes Études,
Université des Antilles, Paris, 75005, France
Frederik Leliaert
Meise Botanic Garden, Meise, 1860, Belgium
Olivier De Clerck
CORRESPONDING AUTHOR
Biology Department, Research Group Phycology, Ghent University, Ghent,
9000, Belgium
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Raed Halawi Ghosn, Émilie Poisson-Caillault, Guillaume Charria, Armel Bonnat, Michel Repecaud, Jean-Valery Facq, Loïc Quéméner, Vincent Duquesne, Camille Blondel, and Alain Lefebvre
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Fabrice Stephenson, Tom Brough, Drew Lohrer, Daniel Leduc, Shane Geange, Owen Anderson, David Bowden, Malcolm R. Clark, Niki Davey, Enrique Pardo, Dennis P. Gordon, Brittany Finucci, Michelle Kelly, Diana Macpherson, Lisa McCartain, Sadie Mills, Kate Neill, Wendy Nelson, Rachael Peart, Matthew H. Pinkerton, Geoffrey B. Read, Jodie Robertson, Ashley Rowden, Kareen Schnabel, Andrew Stewart, Carl Struthers, Leigh Tait, Di Tracey, Shaun Weston, and Carolyn Lundquist
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Studies of light fields in aquatic environments require data from radiative transfer simulations that are free of measurement errors. In contrast to previously published synthetic optical databases, the present database was created by simulations covering a broad range of seawater optical properties that exhibit probability distributions consistent with a global ocean dominated by open-ocean pelagic environments. This database is intended to support ocean color science and applications.
Philippe Massicotte, Marcel Babin, Frank Fell, Vincent Fournier-Sicre, and David Doxaran
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Earth Syst. Sci. Data, 15, 3263–3281, https://doi.org/10.5194/essd-15-3263-2023, https://doi.org/10.5194/essd-15-3263-2023, 2023
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This article presents an overview of the results of biological, chemical and physical parameters measured at high temporal resolution (sampling once and twice per week) during environmental monitoring that took place in 2021 in the Bay of Brest. We strongly believe that this dataset could be very useful for other scientists performing sclerochronological investigations, studying biogeochemical cycles or conducting various ecological research projects.
Alain Lefebvre and David Devreker
Earth Syst. Sci. Data, 15, 1077–1092, https://doi.org/10.5194/essd-15-1077-2023, https://doi.org/10.5194/essd-15-1077-2023, 2023
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The Suivi Regional des Nutriments (SRN) data set includes long-term time series on marine phytoplankton and physicochemical measures in the eastern English Channel and the Southern Bight of the North Sea. These data sets should be useful for comparing contrasted coastal marine ecosystems to further knowledge about the direct and indirect effects of human pressures and environmental changes on ecosystem structure and function, including eutrophication and harmful algal bloom issues.
Jacopo Pulcinella, Enrico Nicola Armelloni, Carmen Ferrà, Giuseppe Scarcella, and Anna Nora Tassetti
Earth Syst. Sci. Data, 15, 809–820, https://doi.org/10.5194/essd-15-809-2023, https://doi.org/10.5194/essd-15-809-2023, 2023
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Deep-sea fishery in the Mediterranean Sea was historically driven by the commercial profitability of deepwater red shrimps. Understanding spatiotemporal dynamics of fishing is key to comprehensively evaluate the status of these resources and prevent stock collapse. The observed monthly fishing effort and frequency dataset released by the automatic identification system (AIS) may help researchers as well as those involved in fishery management and in the update of existing management plans.
Simone Strydom, Roisin McCallum, Anna Lafratta, Chanelle L. Webster, Caitlyn M. O'Dea, Nicole E. Said, Natasha Dunham, Karina Inostroza, Cristian Salinas, Samuel Billinghurst, Charlie M. Phelps, Connor Campbell, Connor Gorham, Rachele Bernasconi, Anna M. Frouws, Axel Werner, Federico Vitelli, Viena Puigcorbé, Alexandra D'Cruz, Kathryn M. McMahon, Jack Robinson, Megan J. Huggett, Sian McNamara, Glenn A. Hyndes, and Oscar Serrano
Earth Syst. Sci. Data, 15, 511–519, https://doi.org/10.5194/essd-15-511-2023, https://doi.org/10.5194/essd-15-511-2023, 2023
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Seagrasses are important underwater plants that provide valuable ecosystem services to humans, including mitigating climate change. Understanding the natural history of seagrass meadows across different types of environments is crucial to conserving seagrasses in the global ocean. This dataset contains data extracted from peer-reviewed publications and highlights which seagrasses have been studied and in which locations and is useful for pointing out which need further investigation.
Flavienne Bruyant, Rémi Amiraux, Marie-Pier Amyot, Philippe Archambault, Lise Artigue, Lucas Barbedo de Freitas, Guislain Bécu, Simon Bélanger, Pascaline Bourgain, Annick Bricaud, Etienne Brouard, Camille Brunet, Tonya Burgers, Danielle Caleb, Katrine Chalut, Hervé Claustre, Véronique Cornet-Barthaux, Pierre Coupel, Marine Cusa, Fanny Cusset, Laeticia Dadaglio, Marty Davelaar, Gabrièle Deslongchamps, Céline Dimier, Julie Dinasquet, Dany Dumont, Brent Else, Igor Eulaers, Joannie Ferland, Gabrielle Filteau, Marie-Hélène Forget, Jérome Fort, Louis Fortier, Martí Galí, Morgane Gallinari, Svend-Erik Garbus, Nicole Garcia, Catherine Gérikas Ribeiro, Colline Gombault, Priscilla Gourvil, Clémence Goyens, Cindy Grant, Pierre-Luc Grondin, Pascal Guillot, Sandrine Hillion, Rachel Hussherr, Fabien Joux, Hannah Joy-Warren, Gabriel Joyal, David Kieber, Augustin Lafond, José Lagunas, Patrick Lajeunesse, Catherine Lalande, Jade Larivière, Florence Le Gall, Karine Leblanc, Mathieu Leblanc, Justine Legras, Keith Lévesque, Kate-M. Lewis, Edouard Leymarie, Aude Leynaert, Thomas Linkowski, Martine Lizotte, Adriana Lopes dos Santos, Claudie Marec, Dominique Marie, Guillaume Massé, Philippe Massicotte, Atsushi Matsuoka, Lisa A. Miller, Sharif Mirshak, Nathalie Morata, Brivaela Moriceau, Philippe-Israël Morin, Simon Morisset, Anders Mosbech, Alfonso Mucci, Gabrielle Nadaï, Christian Nozais, Ingrid Obernosterer, Thimoté Paire, Christos Panagiotopoulos, Marie Parenteau, Noémie Pelletier, Marc Picheral, Bernard Quéguiner, Patrick Raimbault, Joséphine Ras, Eric Rehm, Llúcia Ribot Lacosta, Jean-François Rontani, Blanche Saint-Béat, Julie Sansoulet, Noé Sardet, Catherine Schmechtig, Antoine Sciandra, Richard Sempéré, Caroline Sévigny, Jordan Toullec, Margot Tragin, Jean-Éric Tremblay, Annie-Pier Trottier, Daniel Vaulot, Anda Vladoiu, Lei Xue, Gustavo Yunda-Guarin, and Marcel Babin
Earth Syst. Sci. Data, 14, 4607–4642, https://doi.org/10.5194/essd-14-4607-2022, https://doi.org/10.5194/essd-14-4607-2022, 2022
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This paper presents a dataset acquired during a research cruise held in Baffin Bay in 2016. We observed that the disappearance of sea ice in the Arctic Ocean increases both the length and spatial extent of the phytoplankton growth season. In the future, this will impact the food webs on which the local populations depend for their food supply and fisheries. This dataset will provide insight into quantifying these impacts and help the decision-making process for policymakers.
Rainer Kiko, Marc Picheral, David Antoine, Marcel Babin, Léo Berline, Tristan Biard, Emmanuel Boss, Peter Brandt, Francois Carlotti, Svenja Christiansen, Laurent Coppola, Leandro de la Cruz, Emilie Diamond-Riquier, Xavier Durrieu de Madron, Amanda Elineau, Gabriel Gorsky, Lionel Guidi, Helena Hauss, Jean-Olivier Irisson, Lee Karp-Boss, Johannes Karstensen, Dong-gyun Kim, Rachel M. Lekanoff, Fabien Lombard, Rubens M. Lopes, Claudie Marec, Andrew M. P. McDonnell, Daniela Niemeyer, Margaux Noyon, Stephanie H. O'Daly, Mark D. Ohman, Jessica L. Pretty, Andreas Rogge, Sarah Searson, Masashi Shibata, Yuji Tanaka, Toste Tanhua, Jan Taucher, Emilia Trudnowska, Jessica S. Turner, Anya Waite, and Lars Stemmann
Earth Syst. Sci. Data, 14, 4315–4337, https://doi.org/10.5194/essd-14-4315-2022, https://doi.org/10.5194/essd-14-4315-2022, 2022
Short summary
Short summary
The term
marine particlescomprises detrital aggregates; fecal pellets; bacterioplankton, phytoplankton and zooplankton; and even fish. Here, we present a global dataset that contains 8805 vertical particle size distribution profiles obtained with Underwater Vision Profiler 5 (UVP5) camera systems. These data are valuable to the scientific community, as they can be used to constrain important biogeochemical processes in the ocean, such as the flux of carbon to the deep sea.
Autun Purser, Laura Hehemann, Lilian Boehringer, Ellen Werner, Santiago E. A. Pineda-Metz, Lucie Vignes, Axel Nordhausen, Moritz Holtappels, and Frank Wenzhoefer
Earth Syst. Sci. Data, 14, 3635–3648, https://doi.org/10.5194/essd-14-3635-2022, https://doi.org/10.5194/essd-14-3635-2022, 2022
Short summary
Short summary
Within this paper we present the seafloor images, maps and acoustic camera data collected by a towed underwater research platform deployed in 20 locations across the eastern Weddell Sea, Antarctica, during the PS124 COSMUS expedition with the research icebreaker RV Polarstern in 2021. The 20 deployments highlight the great variability in seafloor structure and faunal communities present. Of key interest was the discovery of the largest fish nesting colony discovered globally to date.
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Short summary
We present AlgaeTraits, a high-quality seaweed trait database. The data are structured within the framework of WoRMS and are supported by an expert editor community. With 45 175 trait records for 21 prioritised biological and ecological traits, and a taxonomic coverage of 1 745 European species, AlgaeTraits significantly advances previous efforts to provide standardised seaweed trait data. AlgaeTraits will serve as a foundation for future research on diversity and evolution of seaweeds.
We present AlgaeTraits, a high-quality seaweed trait database. The data are structured within...
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