Articles | Volume 16, issue 1
https://doi.org/10.5194/essd-16-715-2024
© Author(s) 2024. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/essd-16-715-2024
© Author(s) 2024. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Data description paper
| 
31 Jan 2024
Data description paper |
| 31 Jan 2024
| 31 Jan 2024
Reference maps of soil phosphorus for the pan-Amazon region
João Paulo Darela-Filho
CORRESPONDING AUTHOR
Institute of Biosciences, São Paulo State University (Unesp), Rio Claro, 13506-900, Brazil
Earth System Science Laboratory (LabTerra), University of Campinas (Unicamp) Center for Meteorological and Climatic Research Applied to Agriculture (CEPAGRI), Campinas – SP, 13083-886, Brazil
School of Life Sciences, Technical University of Munich (TUM), 85354 Freising, Germany
Anja Rammig
School of Life Sciences, Technical University of Munich (TUM), 85354 Freising, Germany
Katrin Fleischer
School of Life Sciences, Technical University of Munich (TUM), 85354 Freising, Germany
Department of Biogeochemical Signals, Max Planck Institute for Biogeochemistry, 07745 Jena, Germany
Tatiana Reichert
School of Life Sciences, Technical University of Munich (TUM), 85354 Freising, Germany
Laynara Figueiredo Lugli
School of Life Sciences, Technical University of Munich (TUM), 85354 Freising, Germany
Carlos Alberto Quesada
Coordination of Environmental Dynamics (CODAM), National Institute for Amazonian Research – INPA, Avenida André Araújo, 2236, Manaus, Amazonas, 69060-001, Brazil
Luis Carlos Colocho Hurtarte
European Synchrotron Radiation Facility, Beamline ID21, Grenoble 38100, France
Diamond Light Source Ltd., Didcot, Oxfordshire, OX11 0DE, UK
Mateus Dantas de Paula
Senckenberg Biodiversity and Climate Research Centre (SBiK-F), 60325 Frankfurt am Main, Germany
David M. Lapola
Earth System Science Laboratory (LabTerra), University of Campinas (Unicamp) Center for Meteorological and Climatic Research Applied to Agriculture (CEPAGRI), Campinas – SP, 13083-886, Brazil
Related authors
Mateus Dantas de Paula, Tatiana Reichert, Laynara F. Lugli, Erica McGale, Kerstin Pierick, João Paulo Darela-Filho, Liam Langan, Jürgen Homeier, Anja Rammig, and Thomas Hickler
Biogeosciences, 22, 2707–2732, https://doi.org/10.5194/bg-22-2707-2025, https://doi.org/10.5194/bg-22-2707-2025, 2025
Short summary
Short summary
This study explores how plant roots with different forms and functions rely on fungal partnerships for nutrient uptake. This relationship was integrated into a vegetation model and was tested in a tropical forest in Ecuador. The model accurately predicted root traits and showed that without fungi, biomass decreased by up to 80 %. The findings highlight the critical role of fungi in ecosystem processes and suggest that root–fungal interactions should be considered in vegetation models.
Konstantin Gregor, Benjamin F. Meyer, Tillmann Gaida, Victor Justo Vasquez, Karina Bett-Williams, Matthew Forrest, João P. Darela-Filho, Sam Rabin, Marcos Longo, Joe R. Melton, Johan Nord, Peter Anthoni, Vladislav Bastrikov, Thomas Colligan, Christine Delire, Michael C. Dietze, George Hurtt, Akihiko Ito, Lasse T. Keetz, Jürgen Knauer, Johannes Köster, Tzu-Shun Lin, Lei Ma, Marie Minvielle, Stefan Olin, Sebastian Ostberg, Hao Shi, Reiner Schnur, Urs Schönenberger, Qing Sun, Peter E. Thornton, and Anja Rammig
EGUsphere, https://doi.org/10.5194/egusphere-2025-1733, https://doi.org/10.5194/egusphere-2025-1733, 2025
This preprint is open for discussion and under review for Geoscientific Model Development (GMD).
Short summary
Short summary
Geoscientific models are crucial for understanding Earth’s processes. However, they sometimes do not adhere to highest software quality standards, and scientific results are often hard to reproduce due to the complexity of the workflows. Here we gather the expertise of 20 modeling groups and software engineers to define best practices for making geoscientific models maintainable, usable, and reproducible. We conclude with an open-source example serving as a reference for modeling communities.
Mateus Dantas de Paula, Matthew Forrest, David Warlind, João Paulo Darela Filho, Katrin Fleischer, Anja Rammig, and Thomas Hickler
Geosci. Model Dev., 18, 2249–2274, https://doi.org/10.5194/gmd-18-2249-2025, https://doi.org/10.5194/gmd-18-2249-2025, 2025
Short summary
Short summary
Our study maps global nitrogen (N) and phosphorus (P) availability and how they changed from 1901 to 2018. We find that tropical regions are mostly P-limited, while temperate and boreal areas face N limitations. Over time, P limitation increased, especially in the tropics, while N limitation decreased. These shifts are key to understanding global plant growth and carbon storage, highlighting the importance of including P dynamics in ecosystem models.
Benjamin Franklin Meyer, João Paulo Darela-Filho, Konstantin Gregor, Allan Buras, Qiao-Lin Gu, Andreas Krause, Daijun Liu, Phillip Papastefanou, Sijeh Asuk, Thorsten E. E. Grams, Christian S. Zang, and Anja Rammig
EGUsphere, https://doi.org/10.5194/egusphere-2024-3352, https://doi.org/10.5194/egusphere-2024-3352, 2024
Short summary
Short summary
Climate change has increased the likelihood of drought events across Europe, potentially threatening European forest carbon sink. Dynamic vegetation models with mechanistic plant hydraulic architecture are needed to model these developments. We evaluate the plant hydraulic architecture version of LPJ-GUESS and show it's capability at capturing species-specific evapotranspiration responses to drought and reproducing flux observations of both gross primary production and evapotranspiration.
Mateus Dantas de Paula, Tatiana Reichert, Laynara F. Lugli, Erica McGale, Kerstin Pierick, João Paulo Darela-Filho, Liam Langan, Jürgen Homeier, Anja Rammig, and Thomas Hickler
Biogeosciences, 22, 2707–2732, https://doi.org/10.5194/bg-22-2707-2025, https://doi.org/10.5194/bg-22-2707-2025, 2025
Short summary
Short summary
This study explores how plant roots with different forms and functions rely on fungal partnerships for nutrient uptake. This relationship was integrated into a vegetation model and was tested in a tropical forest in Ecuador. The model accurately predicted root traits and showed that without fungi, biomass decreased by up to 80 %. The findings highlight the critical role of fungi in ecosystem processes and suggest that root–fungal interactions should be considered in vegetation models.
Konstantin Gregor, Benjamin F. Meyer, Tillmann Gaida, Victor Justo Vasquez, Karina Bett-Williams, Matthew Forrest, João P. Darela-Filho, Sam Rabin, Marcos Longo, Joe R. Melton, Johan Nord, Peter Anthoni, Vladislav Bastrikov, Thomas Colligan, Christine Delire, Michael C. Dietze, George Hurtt, Akihiko Ito, Lasse T. Keetz, Jürgen Knauer, Johannes Köster, Tzu-Shun Lin, Lei Ma, Marie Minvielle, Stefan Olin, Sebastian Ostberg, Hao Shi, Reiner Schnur, Urs Schönenberger, Qing Sun, Peter E. Thornton, and Anja Rammig
EGUsphere, https://doi.org/10.5194/egusphere-2025-1733, https://doi.org/10.5194/egusphere-2025-1733, 2025
This preprint is open for discussion and under review for Geoscientific Model Development (GMD).
Short summary
Short summary
Geoscientific models are crucial for understanding Earth’s processes. However, they sometimes do not adhere to highest software quality standards, and scientific results are often hard to reproduce due to the complexity of the workflows. Here we gather the expertise of 20 modeling groups and software engineers to define best practices for making geoscientific models maintainable, usable, and reproducible. We conclude with an open-source example serving as a reference for modeling communities.
Friedrich J. Bohn, Ana Bastos, Romina Martin, Anja Rammig, Niak Sian Koh, Giles B. Sioen, Bram Buscher, Louise Carver, Fabrice DeClerck, Moritz Drupp, Robert Fletcher, Matthew Forrest, Alexandros Gasparatos, Alex Godoy-Faúndez, Gregor Hagedorn, Martin C. Hänsel, Jessica Hetzer, Thomas Hickler, Cornelia B. Krug, Stasja Koot, Xiuzhen Li, Amy Luers, Shelby Matevich, H. Damon Matthews, Ina C. Meier, Mirco Migliavacca, Awaz Mohamed, Sungmin O, David Obura, Ben Orlove, Rene Orth, Laura Pereira, Markus Reichstein, Lerato Thakholi, Peter H. Verburg, and Yuki Yoshida
Biogeosciences, 22, 2425–2460, https://doi.org/10.5194/bg-22-2425-2025, https://doi.org/10.5194/bg-22-2425-2025, 2025
Short summary
Short summary
An interdisciplinary collaboration of 36 international researchers from 35 institutions highlights recent findings in biosphere research. Within eight themes, they discuss issues arising from climate change and other anthropogenic stressors and highlight the co-benefits of nature-based solutions and ecosystem services. Based on an analysis of these eight topics, we have synthesized four overarching insights.
Mateus Dantas de Paula, Matthew Forrest, David Warlind, João Paulo Darela Filho, Katrin Fleischer, Anja Rammig, and Thomas Hickler
Geosci. Model Dev., 18, 2249–2274, https://doi.org/10.5194/gmd-18-2249-2025, https://doi.org/10.5194/gmd-18-2249-2025, 2025
Short summary
Short summary
Our study maps global nitrogen (N) and phosphorus (P) availability and how they changed from 1901 to 2018. We find that tropical regions are mostly P-limited, while temperate and boreal areas face N limitations. Over time, P limitation increased, especially in the tropics, while N limitation decreased. These shifts are key to understanding global plant growth and carbon storage, highlighting the importance of including P dynamics in ecosystem models.
Carlos A. Sierra, Ingrid Chanca, Meinrat Andreae, Alessandro Carioca de Araújo, Hella van Asperen, Lars Borchardt, Santiago Botía, Luiz Antonio Candido, Caio S. C. Correa, Cléo Quaresma Dias-Junior, Markus Eritt, Annica Fröhlich, Luciana V. Gatti, Marcus Guderle, Samuel Hammer, Martin Heimann, Viviana Horna, Armin Jordan, Steffen Knabe, Richard Kneißl, Jost Valentin Lavric, Ingeborg Levin, Kita Macario, Juliana Menger, Heiko Moossen, Carlos Alberto Quesada, Michael Rothe, Christian Rödenbeck, Yago Santos, Axel Steinhof, Bruno Takeshi, Susan Trumbore, and Sönke Zaehle
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2025-151, https://doi.org/10.5194/essd-2025-151, 2025
Preprint under review for ESSD
Short summary
Short summary
We present here a unique dataset of atmospheric observations of greenhouse gases and isotopes that provide key information on land-atmosphere interactions for the Amazon forests of central Brazil. The data show a relatively large level of variability, but also important trends in greenhouse gases, and signals from fires as well as seasonal biological activity.
Ingrid Chanca, Ingeborg Levin, Susan Trumbore, Kita Macario, Jost Lavric, Carlos Alberto Quesada, Alessandro Carioca de Araújo, Cléo Quaresma Dias Júnior, Hella van Asperen, Samuel Hammer, and Carlos A. Sierra
Biogeosciences, 22, 455–472, https://doi.org/10.5194/bg-22-455-2025, https://doi.org/10.5194/bg-22-455-2025, 2025
Short summary
Short summary
Assessing the net carbon (C) budget of the Amazon entails considering the magnitude and timing of C absorption and losses through respiration (transit time of C). Radiocarbon-based estimates of the transit time of C in the Amazon Tall Tower Observatory (ATTO) suggest a change in the transit time from 6 ± 2 years and 18 ± 4 years within 2 years (October 2019 and December 2021, respectively). This variability indicates that only a fraction of newly fixed C can be stored for decades or longer.
Helena Vallicrosa, Katrin Fleischer, Manuel Delgado-Baquerizo, Marcos Fernández-Martínez, Jakub Cerny, Di Tian, Angeliki Kourmouli, Carolina Mayoral, Diego Grados, Mingzhen Lu, and César Terrer
EGUsphere, https://doi.org/10.5194/egusphere-2024-3661, https://doi.org/10.5194/egusphere-2024-3661, 2025
Short summary
Short summary
We used field empirical data worldwide to calculate plant nitrogen uptake (Nup) and nitrogen use efficiency (NUE) in woodlands and grasslands and determine its drivers, which can be used as empirical validation for models. Even though some regions of the world have decreased their N deposition, N deposition is still the most important driver explaining plant nitrogen uptake, aside from climatic variables.
Benjamin Franklin Meyer, João Paulo Darela-Filho, Konstantin Gregor, Allan Buras, Qiao-Lin Gu, Andreas Krause, Daijun Liu, Phillip Papastefanou, Sijeh Asuk, Thorsten E. E. Grams, Christian S. Zang, and Anja Rammig
EGUsphere, https://doi.org/10.5194/egusphere-2024-3352, https://doi.org/10.5194/egusphere-2024-3352, 2024
Short summary
Short summary
Climate change has increased the likelihood of drought events across Europe, potentially threatening European forest carbon sink. Dynamic vegetation models with mechanistic plant hydraulic architecture are needed to model these developments. We evaluate the plant hydraulic architecture version of LPJ-GUESS and show it's capability at capturing species-specific evapotranspiration responses to drought and reproducing flux observations of both gross primary production and evapotranspiration.
Olivier Bouriaud, Ernst-Detlef Schulze, Konstantin Gregor, Issam Bourkhris, Peter Högberg, Roland Irslinger, Phillip Papastefanou, Julia Pongratz, Anja Rammig, Riccardo Valentini, and Christian Körner
EGUsphere, https://doi.org/10.5194/egusphere-2024-3092, https://doi.org/10.5194/egusphere-2024-3092, 2024
Short summary
Short summary
The impact of harvesting on forests' carbon sink capacities is debated. One view is that their sink strength is resilient to harvesting, the other that it disrupts these capacities. Our work shows that leaf area index (LAI) has been overlooked in this discussion. We found that temperate forests' carbon uptake is largely insensitive to variations in LAI beyond about 4 m² m-², but that forests operate at higher levels.
Luiz A. T. Machado, Jürgen Kesselmeier, Santiago Botía, Hella van Asperen, Meinrat O. Andreae, Alessandro C. de Araújo, Paulo Artaxo, Achim Edtbauer, Rosaria R. Ferreira, Marco A. Franco, Hartwig Harder, Sam P. Jones, Cléo Q. Dias-Júnior, Guido G. Haytzmann, Carlos A. Quesada, Shujiro Komiya, Jost Lavric, Jos Lelieveld, Ingeborg Levin, Anke Nölscher, Eva Pfannerstill, Mira L. Pöhlker, Ulrich Pöschl, Akima Ringsdorf, Luciana Rizzo, Ana M. Yáñez-Serrano, Susan Trumbore, Wanda I. D. Valenti, Jordi Vila-Guerau de Arellano, David Walter, Jonathan Williams, Stefan Wolff, and Christopher Pöhlker
Atmos. Chem. Phys., 24, 8893–8910, https://doi.org/10.5194/acp-24-8893-2024, https://doi.org/10.5194/acp-24-8893-2024, 2024
Short summary
Short summary
Composite analysis of gas concentration before and after rainfall, during the day and night, gives insight into the complex relationship between trace gas variability and precipitation. The analysis helps us to understand the sources and sinks of trace gases within a forest ecosystem. It elucidates processes that are not discernible under undisturbed conditions and contributes to a deeper understanding of the trace gas life cycle and its intricate interactions with cloud dynamics in the Amazon.
Lucia S. Layritz, Konstantin Gregor, Andreas Krause, Stefan Kruse, Ben F. Meyer, Tom A. M. Pugh, and Anja Rammig
EGUsphere, https://doi.org/10.5194/egusphere-2024-1028, https://doi.org/10.5194/egusphere-2024-1028, 2024
Short summary
Short summary
Disturbances (e.g. fire) can change which species grow in a forest, affecting water, carbon, energy flows, and the climate. They are expected to increase with climate change, but it is uncertain by how much. We studied how future climate and disturbances might impact vegetation with a simulation model. Our findings highlight the importance of considering both factors, with future disturbance patterns posing significant uncertainty. More research is needed to understand their future development.
Laura M. Pereira, Ignacio Gianelli, Therezah Achieng, Diva Amon, Sally Archibald, Suchinta Arif, Azucena Castro, Tapiwa Prosper Chimbadzwa, Kaera Coetzer, Tracy-Lynn Field, Odirilwe Selomane, Nadia Sitas, Nicola Stevens, Sebastian Villasante, Mohammed Armani, Duncan M. Kimuyu, Ibukun J. Adewumi, David M. Lapola, David Obura, Patricia Pinho, Felipe Roa-Clavijo, Juan Rocha, and U. Rashid Sumaila
Earth Syst. Dynam., 15, 341–366, https://doi.org/10.5194/esd-15-341-2024, https://doi.org/10.5194/esd-15-341-2024, 2024
Short summary
Short summary
Narratives around tipping points, such as the need for
positivetipping points in energy transitions to avoid
negativeEarth system tipping points, do not take into account the entire spectrum of impacts the proposed interventions could have or still rely on narratives that maintain current unsustainable behaviours and marginalize many people. We unpack these ideas in the context of what they mean for the concept of tipping points, using a critical decolonial view from the Global South.
Melanie A. Thurner, Silvia Caldararu, Jan Engel, Anja Rammig, and Sönke Zaehle
Biogeosciences, 21, 1391–1410, https://doi.org/10.5194/bg-21-1391-2024, https://doi.org/10.5194/bg-21-1391-2024, 2024
Short summary
Short summary
Due to their crucial role in terrestrial ecosystems, we implemented mycorrhizal fungi into the QUINCY terrestrial biosphere model. Fungi interact with mineral and organic soil to support plant N uptake and, thus, plant growth. Our results suggest that the effect of mycorrhizal interactions on simulated ecosystem dynamics is minor under constant environmental conditions but necessary to reproduce and understand observed patterns under changing conditions, such as rising atmospheric CO2.
Benjamin F. Meyer, Allan Buras, Konstantin Gregor, Lucia S. Layritz, Adriana Principe, Jürgen Kreyling, Anja Rammig, and Christian S. Zang
Biogeosciences, 21, 1355–1370, https://doi.org/10.5194/bg-21-1355-2024, https://doi.org/10.5194/bg-21-1355-2024, 2024
Short summary
Short summary
Late-spring frost (LSF), critically low temperatures when trees have already flushed their leaves, results in freezing damage leaving trees with reduced ability to perform photosynthesis. Forests with a high proportion of susceptible species like European beech are particularly vulnerable. However, this process is rarely included in dynamic vegetation models (DVMs). We show that the effect on simulated productivity and biomass is substantial, warranting more widespread inclusion of LSF in DVMs.
Jennifer A. Holm, David M. Medvigy, Benjamin Smith, Jeffrey S. Dukes, Claus Beier, Mikhail Mishurov, Xiangtao Xu, Jeremy W. Lichstein, Craig D. Allen, Klaus S. Larsen, Yiqi Luo, Cari Ficken, William T. Pockman, William R. L. Anderegg, and Anja Rammig
Biogeosciences, 20, 2117–2142, https://doi.org/10.5194/bg-20-2117-2023, https://doi.org/10.5194/bg-20-2117-2023, 2023
Short summary
Short summary
Unprecedented climate extremes (UCEs) are expected to have dramatic impacts on ecosystems. We present a road map of how dynamic vegetation models can explore extreme drought and climate change and assess ecological processes to measure and reduce model uncertainties. The models predict strong nonlinear responses to UCEs. Due to different model representations, the models differ in magnitude and trajectory of forest loss. Therefore, we explore specific plant responses that reflect knowledge gaps.
Johannes Oberpriller, Christine Herschlein, Peter Anthoni, Almut Arneth, Andreas Krause, Anja Rammig, Mats Lindeskog, Stefan Olin, and Florian Hartig
Geosci. Model Dev., 15, 6495–6519, https://doi.org/10.5194/gmd-15-6495-2022, https://doi.org/10.5194/gmd-15-6495-2022, 2022
Short summary
Short summary
Understanding uncertainties of projected ecosystem dynamics under environmental change is of immense value for research and climate change policy. Here, we analyzed these across European forests. We find that uncertainties are dominantly induced by parameters related to water, mortality, and climate, with an increasing importance of climate from north to south. These results highlight that climate not only contributes uncertainty but also modifies uncertainties in other ecosystem processes.
Phillip Papastefanou, Christian S. Zang, Zlatan Angelov, Aline Anderson de Castro, Juan Carlos Jimenez, Luiz Felipe Campos De Rezende, Romina C. Ruscica, Boris Sakschewski, Anna A. Sörensson, Kirsten Thonicke, Carolina Vera, Nicolas Viovy, Celso Von Randow, and Anja Rammig
Biogeosciences, 19, 3843–3861, https://doi.org/10.5194/bg-19-3843-2022, https://doi.org/10.5194/bg-19-3843-2022, 2022
Short summary
Short summary
The Amazon rainforest has been hit by multiple severe drought events. In this study, we assess the severity and spatial extent of the extreme drought years 2005, 2010 and 2015/16 in the Amazon. Using nine different precipitation datasets and three drought indicators we find large differences in drought stress across the Amazon region. We conclude that future studies should use multiple rainfall datasets and drought indicators when estimating the impact of drought stress in the Amazon region.
Mahdi André Nakhavali, Lina M. Mercado, Iain P. Hartley, Stephen Sitch, Fernanda V. Cunha, Raffaello di Ponzio, Laynara F. Lugli, Carlos A. Quesada, Kelly M. Andersen, Sarah E. Chadburn, Andy J. Wiltshire, Douglas B. Clark, Gyovanni Ribeiro, Lara Siebert, Anna C. M. Moraes, Jéssica Schmeisk Rosa, Rafael Assis, and José L. Camargo
Geosci. Model Dev., 15, 5241–5269, https://doi.org/10.5194/gmd-15-5241-2022, https://doi.org/10.5194/gmd-15-5241-2022, 2022
Short summary
Short summary
In tropical ecosystems, the availability of rock-derived elements such as P can be very low. Thus, without a representation of P cycling, tropical forest responses to rising atmospheric CO2 conditions in areas such as Amazonia remain highly uncertain. We introduced P dynamics and its interactions with the N and P cycles into the JULES model. Our results highlight the potential for high P limitation and therefore lower CO2 fertilization capacity in the Amazon forest with low-fertility soils.
Lore T. Verryckt, Sara Vicca, Leandro Van Langenhove, Clément Stahl, Dolores Asensio, Ifigenia Urbina, Romà Ogaya, Joan Llusià, Oriol Grau, Guille Peguero, Albert Gargallo-Garriga, Elodie A. Courtois, Olga Margalef, Miguel Portillo-Estrada, Philippe Ciais, Michael Obersteiner, Lucia Fuchslueger, Laynara F. Lugli, Pere-Roc Fernandez-Garberí, Helena Vallicrosa, Melanie Verlinden, Christian Ranits, Pieter Vermeir, Sabrina Coste, Erik Verbruggen, Laëtitia Bréchet, Jordi Sardans, Jérôme Chave, Josep Peñuelas, and Ivan A. Janssens
Earth Syst. Sci. Data, 14, 5–18, https://doi.org/10.5194/essd-14-5-2022, https://doi.org/10.5194/essd-14-5-2022, 2022
Short summary
Short summary
We provide a comprehensive dataset of vertical profiles of photosynthesis and important leaf traits, including leaf N and P concentrations, from two 3-year, large-scale nutrient addition experiments conducted in two tropical rainforests in French Guiana. These data present a unique source of information to further improve model representations of the roles of N and P, and other leaf nutrients, in photosynthesis in tropical forests.
Mats Lindeskog, Benjamin Smith, Fredrik Lagergren, Ekaterina Sycheva, Andrej Ficko, Hans Pretzsch, and Anja Rammig
Geosci. Model Dev., 14, 6071–6112, https://doi.org/10.5194/gmd-14-6071-2021, https://doi.org/10.5194/gmd-14-6071-2021, 2021
Short summary
Short summary
Forests play an important role in the global carbon cycle and for carbon storage. In Europe, forests are intensively managed. To understand how management influences carbon storage in European forests, we implement detailed forest management into the dynamic vegetation model LPJ-GUESS. We test the model by comparing model output to typical forestry measures, such as growing stock and harvest data, for different countries in Europe.
Thomas Janssen, Ype van der Velde, Florian Hofhansl, Sebastiaan Luyssaert, Kim Naudts, Bart Driessen, Katrin Fleischer, and Han Dolman
Biogeosciences, 18, 4445–4472, https://doi.org/10.5194/bg-18-4445-2021, https://doi.org/10.5194/bg-18-4445-2021, 2021
Short summary
Short summary
Satellite images show that the Amazon forest has greened up during past droughts. Measurements of tree stem growth and leaf litterfall upscaled using machine-learning algorithms show that leaf flushing at the onset of a drought results in canopy rejuvenation and green-up during drought while simultaneously trees excessively shed older leaves and tree stem growth declines. Canopy green-up during drought therefore does not necessarily point to enhanced tree growth and improved forest health.
Gilvan Sampaio, Marília H. Shimizu, Carlos A. Guimarães-Júnior, Felipe Alexandre, Marcelo Guatura, Manoel Cardoso, Tomas F. Domingues, Anja Rammig, Celso von Randow, Luiz F. C. Rezende, and David M. Lapola
Biogeosciences, 18, 2511–2525, https://doi.org/10.5194/bg-18-2511-2021, https://doi.org/10.5194/bg-18-2511-2021, 2021
Short summary
Short summary
The impact of large-scale deforestation and the physiological effects of elevated atmospheric CO2 on Amazon rainfall are systematically compared in this study. Our results are remarkable in showing that the two disturbances cause equivalent rainfall decrease, though through different causal mechanisms. These results highlight the importance of not only curbing regional deforestation but also reducing global CO2 emissions to avoid climatic changes in the Amazon.
Thomas A. M. Pugh, Tim Rademacher, Sarah L. Shafer, Jörg Steinkamp, Jonathan Barichivich, Brian Beckage, Vanessa Haverd, Anna Harper, Jens Heinke, Kazuya Nishina, Anja Rammig, Hisashi Sato, Almut Arneth, Stijn Hantson, Thomas Hickler, Markus Kautz, Benjamin Quesada, Benjamin Smith, and Kirsten Thonicke
Biogeosciences, 17, 3961–3989, https://doi.org/10.5194/bg-17-3961-2020, https://doi.org/10.5194/bg-17-3961-2020, 2020
Short summary
Short summary
The length of time that carbon remains in forest biomass is one of the largest uncertainties in the global carbon cycle. Estimates from six contemporary models found this time to range from 12.2 to 23.5 years for the global mean for 1985–2014. Future projections do not give consistent results, but 13 model-based hypotheses are identified, along with recommendations for pragmatic steps to test them using existing and novel observations, which would help to reduce large current uncertainty.
Thomas Janssen, Katrin Fleischer, Sebastiaan Luyssaert, Kim Naudts, and Han Dolman
Biogeosciences, 17, 2621–2645, https://doi.org/10.5194/bg-17-2621-2020, https://doi.org/10.5194/bg-17-2621-2020, 2020
Short summary
Short summary
The frequency and severity of droughts are expected to increase in the tropics, impacting the functioning of tropical forests. Here, we synthesized observed responses to drought in Neotropical forests. We find that, during drought, trees generally close their leaf stomata, resulting in reductions in photosynthesis, growth and transpiration. However, on the ecosystem scale, these responses are not visible. This indicates that resistance to drought increases from the leaf to ecosystem scale.
Allan Buras, Anja Rammig, and Christian S. Zang
Biogeosciences, 17, 1655–1672, https://doi.org/10.5194/bg-17-1655-2020, https://doi.org/10.5194/bg-17-1655-2020, 2020
Short summary
Short summary
This study compares the climatic conditions and ecosystem response of the extreme European drought of 2018 with the previous extreme drought of 2003. Using gridded climate data and satellite-based remote sensing information, our analyses qualify 2018 as the new European record drought with wide-ranging negative impacts on European ecosystems. Given the observation of forest-legacy effects in 2019 we call for Europe-wide forest monitoring to assess forest vulnerability to climate change.
Nora Linscheid, Lina M. Estupinan-Suarez, Alexander Brenning, Nuno Carvalhais, Felix Cremer, Fabian Gans, Anja Rammig, Markus Reichstein, Carlos A. Sierra, and Miguel D. Mahecha
Biogeosciences, 17, 945–962, https://doi.org/10.5194/bg-17-945-2020, https://doi.org/10.5194/bg-17-945-2020, 2020
Short summary
Short summary
Vegetation typically responds to variation in temperature and rainfall within days. Yet seasonal changes in meteorological conditions, as well as decadal climate variability, additionally shape the state of ecosystems. It remains unclear how vegetation responds to climate variability on these different timescales. We find that the vegetation response to climate variability depends on the timescale considered. This scale dependency should be considered for modeling land–atmosphere interactions.
Carlos Alberto Quesada, Claudia Paz, Erick Oblitas Mendoza, Oliver Lawrence Phillips, Gustavo Saiz, and Jon Lloyd
SOIL, 6, 53–88, https://doi.org/10.5194/soil-6-53-2020, https://doi.org/10.5194/soil-6-53-2020, 2020
Short summary
Short summary
Amazon soils hold as much carbon (C) as is contained in the vegetation. In this work we sampled soils across 8 different Amazonian countries to try to understand which soil properties control current Amazonian soil C concentrations. We confirm previous knowledge that highly developed soils hold C through clay content interactions but also show a previously unreported mechanism of soil C stabilization in the younger Amazonian soil types which hold C through aluminium organic matter interactions.
Anja Rammig, Jens Heinke, Florian Hofhansl, Hans Verbeeck, Timothy R. Baker, Bradley Christoffersen, Philippe Ciais, Hannes De Deurwaerder, Katrin Fleischer, David Galbraith, Matthieu Guimberteau, Andreas Huth, Michelle Johnson, Bart Krujit, Fanny Langerwisch, Patrick Meir, Phillip Papastefanou, Gilvan Sampaio, Kirsten Thonicke, Celso von Randow, Christian Zang, and Edna Rödig
Geosci. Model Dev., 11, 5203–5215, https://doi.org/10.5194/gmd-11-5203-2018, https://doi.org/10.5194/gmd-11-5203-2018, 2018
Short summary
Short summary
We propose a generic approach for a pixel-to-point comparison applicable for evaluation of models and remote-sensing products. We provide statistical measures accounting for the uncertainty in ecosystem variables. We demonstrate our approach by comparing simulated values of aboveground biomass, woody productivity and residence time of woody biomass from four dynamic global vegetation models (DGVMs) with measured inventory data from permanent plots in the Amazon rainforest.
Sibyll Schaphoff, Werner von Bloh, Anja Rammig, Kirsten Thonicke, Hester Biemans, Matthias Forkel, Dieter Gerten, Jens Heinke, Jonas Jägermeyr, Jürgen Knauer, Fanny Langerwisch, Wolfgang Lucht, Christoph Müller, Susanne Rolinski, and Katharina Waha
Geosci. Model Dev., 11, 1343–1375, https://doi.org/10.5194/gmd-11-1343-2018, https://doi.org/10.5194/gmd-11-1343-2018, 2018
Short summary
Short summary
Here we provide a comprehensive model description of a global terrestrial biosphere model, named LPJmL4, incorporating the carbon and water cycle and the quantification of agricultural production. The model allows for the consistent and joint quantification of climate and land use change impacts on the biosphere. The model represents the key ecosystem functions, but also the influence of humans on the biosphere. It comes with an evaluation paper to demonstrate the credibility of LPJmL4.
Sibyll Schaphoff, Matthias Forkel, Christoph Müller, Jürgen Knauer, Werner von Bloh, Dieter Gerten, Jonas Jägermeyr, Wolfgang Lucht, Anja Rammig, Kirsten Thonicke, and Katharina Waha
Geosci. Model Dev., 11, 1377–1403, https://doi.org/10.5194/gmd-11-1377-2018, https://doi.org/10.5194/gmd-11-1377-2018, 2018
Short summary
Short summary
Here we provide a comprehensive evaluation of the now launched version 4.0 of the LPJmL biosphere, water, and agricultural model. The article is the second part to a comprehensive description of the LPJmL4 model. We have evaluated the model against various datasets of satellite observations, agricultural statistics, and in situ measurements by applying a range of metrics. We are able to show that the LPJmL4 model simulates many parameters and relations reasonably.
Jannis von Buttlar, Jakob Zscheischler, Anja Rammig, Sebastian Sippel, Markus Reichstein, Alexander Knohl, Martin Jung, Olaf Menzer, M. Altaf Arain, Nina Buchmann, Alessandro Cescatti, Damiano Gianelle, Gerard Kiely, Beverly E. Law, Vincenzo Magliulo, Hank Margolis, Harry McCaughey, Lutz Merbold, Mirco Migliavacca, Leonardo Montagnani, Walter Oechel, Marian Pavelka, Matthias Peichl, Serge Rambal, Antonio Raschi, Russell L. Scott, Francesco P. Vaccari, Eva van Gorsel, Andrej Varlagin, Georg Wohlfahrt, and Miguel D. Mahecha
Biogeosciences, 15, 1293–1318, https://doi.org/10.5194/bg-15-1293-2018, https://doi.org/10.5194/bg-15-1293-2018, 2018
Short summary
Short summary
Our work systematically quantifies extreme heat and drought event impacts on gross primary productivity (GPP) and ecosystem respiration globally across a wide range of ecosystems. We show that heat extremes typically increased mainly respiration whereas drought decreased both fluxes. Combined heat and drought extremes had opposing effects offsetting each other for respiration, but there were also strong reductions in GPP and hence the strongest reductions in the ecosystems carbon sink capacity.
Miguel D. Mahecha, Fabian Gans, Sebastian Sippel, Jonathan F. Donges, Thomas Kaminski, Stefan Metzger, Mirco Migliavacca, Dario Papale, Anja Rammig, and Jakob Zscheischler
Biogeosciences, 14, 4255–4277, https://doi.org/10.5194/bg-14-4255-2017, https://doi.org/10.5194/bg-14-4255-2017, 2017
Short summary
Short summary
We investigate the likelihood of ecological in situ networks to detect and monitor the impact of extreme events in the terrestrial biosphere.
Matthieu Guimberteau, Philippe Ciais, Agnès Ducharne, Juan Pablo Boisier, Ana Paula Dutra Aguiar, Hester Biemans, Hannes De Deurwaerder, David Galbraith, Bart Kruijt, Fanny Langerwisch, German Poveda, Anja Rammig, Daniel Andres Rodriguez, Graciela Tejada, Kirsten Thonicke, Celso Von Randow, Rita C. S. Von Randow, Ke Zhang, and Hans Verbeeck
Hydrol. Earth Syst. Sci., 21, 1455–1475, https://doi.org/10.5194/hess-21-1455-2017, https://doi.org/10.5194/hess-21-1455-2017, 2017
Fanny Langerwisch, Ariane Walz, Anja Rammig, Britta Tietjen, Kirsten Thonicke, and Wolfgang Cramer
Earth Syst. Dynam., 7, 953–968, https://doi.org/10.5194/esd-7-953-2016, https://doi.org/10.5194/esd-7-953-2016, 2016
Short summary
Short summary
Amazonia is heavily impacted by climate change and deforestation. During annual flooding terrigenous material is imported to the river, converted and finally exported to the ocean or the atmosphere. Changes in the vegetation alter therefore riverine carbon dynamics. Our results show that due to deforestation organic carbon amount will strongly decrease both in the river and exported to the ocean, while inorganic carbon amounts will increase, in the river as well as exported to the atmosphere.
F. Langerwisch, A. Walz, A. Rammig, B. Tietjen, K. Thonicke, and W. Cramer
Earth Syst. Dynam., 7, 559–582, https://doi.org/10.5194/esd-7-559-2016, https://doi.org/10.5194/esd-7-559-2016, 2016
Short summary
Short summary
In Amazonia, carbon fluxes are considerably influenced by annual flooding. We applied the newly developed model RivCM to several climate change scenarios to estimate potential changes in riverine carbon. We find that climate change causes substantial changes in riverine organic and inorganic carbon, as well as changes in carbon exported to the atmosphere and ocean. Such changes could have local and regional impacts on the carbon budget of the whole Amazon basin and parts of the Atlantic Ocean.
K. E. Clark, A. J. West, R. G. Hilton, G. P. Asner, C. A. Quesada, M. R. Silman, S. S. Saatchi, W. Farfan-Rios, R. E. Martin, A. B. Horwath, K. Halladay, M. New, and Y. Malhi
Earth Surf. Dynam., 4, 47–70, https://doi.org/10.5194/esurf-4-47-2016, https://doi.org/10.5194/esurf-4-47-2016, 2016
Short summary
Short summary
The key findings of this paper are that landslides in the eastern Andes of Peru in the Kosñipata Valley rapidly turn over the landscape in ~1320 years, with a rate of 0.076% yr-1. Additionally, landslides were concentrated at lower elevations, due to an intense storm in 2010 accounting for ~1/4 of the total landslide area over the 25-year remote sensing study. Valley-wide carbon stocks were determined, and we estimate that 26 tC km-2 yr-1 of soil and biomass are stripped by landslides.
J. Lloyd, T. F. Domingues, F. Schrodt, F. Y. Ishida, T. R. Feldpausch, G. Saiz, C. A. Quesada, M. Schwarz, M. Torello-Raventos, M. Gilpin, B. S. Marimon, B. H. Marimon-Junior, J. A. Ratter, J. Grace, G. B. Nardoto, E. Veenendaal, L. Arroyo, D. Villarroel, T. J. Killeen, M. Steininger, and O. L. Phillips
Biogeosciences, 12, 6529–6571, https://doi.org/10.5194/bg-12-6529-2015, https://doi.org/10.5194/bg-12-6529-2015, 2015
Short summary
Short summary
Across tropical South America, forest soils are typically of a higher cation status than their savanna equivalents with soil exchangeable potassium a key soil nutrient differentiating these two vegetation types. Differences in soil water storage capacity are also important – interacting with both potassium availability and precipitation regimes in a relatively complex manner.
M. O. Andreae, O. C. Acevedo, A. Araùjo, P. Artaxo, C. G. G. Barbosa, H. M. J. Barbosa, J. Brito, S. Carbone, X. Chi, B. B. L. Cintra, N. F. da Silva, N. L. Dias, C. Q. Dias-Júnior, F. Ditas, R. Ditz, A. F. L. Godoi, R. H. M. Godoi, M. Heimann, T. Hoffmann, J. Kesselmeier, T. Könemann, M. L. Krüger, J. V. Lavric, A. O. Manzi, A. P. Lopes, D. L. Martins, E. F. Mikhailov, D. Moran-Zuloaga, B. W. Nelson, A. C. Nölscher, D. Santos Nogueira, M. T. F. Piedade, C. Pöhlker, U. Pöschl, C. A. Quesada, L. V. Rizzo, C.-U. Ro, N. Ruckteschler, L. D. A. Sá, M. de Oliveira Sá, C. B. Sales, R. M. N. dos Santos, J. Saturno, J. Schöngart, M. Sörgel, C. M. de Souza, R. A. F. de Souza, H. Su, N. Targhetta, J. Tóta, I. Trebs, S. Trumbore, A. van Eijck, D. Walter, Z. Wang, B. Weber, J. Williams, J. Winderlich, F. Wittmann, S. Wolff, and A. M. Yáñez-Serrano
Atmos. Chem. Phys., 15, 10723–10776, https://doi.org/10.5194/acp-15-10723-2015, https://doi.org/10.5194/acp-15-10723-2015, 2015
Short summary
Short summary
This paper describes the Amazon Tall Tower Observatory (ATTO), a new atmosphere-biosphere observatory located in the remote Amazon Basin. It presents results from ecosystem ecology, meteorology, trace gas, and aerosol measurements collected at the ATTO site during the first 3 years of operation.
G. Saiz, M. Bird, C. Wurster, C. A. Quesada, P. Ascough, T. Domingues, F. Schrodt, M. Schwarz, T. R. Feldpausch, E. Veenendaal, G. Djagbletey, G. Jacobsen, F. Hien, H. Compaore, A. Diallo, and J. Lloyd
Biogeosciences, 12, 5041–5059, https://doi.org/10.5194/bg-12-5041-2015, https://doi.org/10.5194/bg-12-5041-2015, 2015
Short summary
Short summary
We demonstrate and explain differential patterns in SOM dynamics in C3/C4 mixed ecosystems at various spatial scales across contrasting climate and soils. This study shows that the interdependence between biotic and abiotic factors ultimately determines whether SOM dynamics of C3- and C4-derived vegetation are at variance in ecosystems where both vegetation types coexist. The results also highlight the far-reaching implications that vegetation thickening may have for the stability of deep SOM.
E. M. Veenendaal, M. Torello-Raventos, T. R. Feldpausch, T. F. Domingues, F. Gerard, F. Schrodt, G. Saiz, C. A. Quesada, G. Djagbletey, A. Ford, J. Kemp, B. S. Marimon, B. H. Marimon-Junior, E. Lenza, J. A. Ratter, L. Maracahipes, D. Sasaki, B. Sonké, L. Zapfack, D. Villarroel, M. Schwarz, F. Yoko Ishida, M. Gilpin, G. B. Nardoto, K. Affum-Baffoe, L. Arroyo, K. Bloomfield, G. Ceca, H. Compaore, K. Davies, A. Diallo, N. M. Fyllas, J. Gignoux, F. Hien, M. Johnson, E. Mougin, P. Hiernaux, T. Killeen, D. Metcalfe, H. S. Miranda, M. Steininger, K. Sykora, M. I. Bird, J. Grace, S. Lewis, O. L. Phillips, and J. Lloyd
Biogeosciences, 12, 2927–2951, https://doi.org/10.5194/bg-12-2927-2015, https://doi.org/10.5194/bg-12-2927-2015, 2015
Short summary
Short summary
When nearby forest and savanna stands are compared, they are not as structurally different as first seems. Moreover, savanna-forest transition zones typically occur at higher rainfall for South America than for Africa but with coexistence confined to a well-defined edaphic-climate envelope. With interacting soil cation-soil water storage–precipitations effects on canopy cover also observed we argue that both soils and climate influence the location of the two major tropical vegetation types.
S. Rolinski, A. Rammig, A. Walz, W. von Bloh, M. van Oijen, and K. Thonicke
Biogeosciences, 12, 1813–1831, https://doi.org/10.5194/bg-12-1813-2015, https://doi.org/10.5194/bg-12-1813-2015, 2015
Short summary
Short summary
Extreme weather events can but do not have to cause extreme ecosystem response. Here, we focus on hazardous ecosystem behaviour and identify coinciding weather conditions.
We use a simple probabilistic risk assessment and apply it to terrestrial ecosystems, defining a hazard as negative net biome productivity. In Europe, ecosystems are vulnerable to drought in the Mediterranean and temperate region, whereas vulnerability in Scandinavia is not caused by water shortages.
A. Rammig, M. Wiedermann, J. F. Donges, F. Babst, W. von Bloh, D. Frank, K. Thonicke, and M. D. Mahecha
Biogeosciences, 12, 373–385, https://doi.org/10.5194/bg-12-373-2015, https://doi.org/10.5194/bg-12-373-2015, 2015
D. C. Zemp, C.-F. Schleussner, H. M. J. Barbosa, R. J. van der Ent, J. F. Donges, J. Heinke, G. Sampaio, and A. Rammig
Atmos. Chem. Phys., 14, 13337–13359, https://doi.org/10.5194/acp-14-13337-2014, https://doi.org/10.5194/acp-14-13337-2014, 2014
M. Van Oijen, J. Balkovi, C. Beer, D. R. Cameron, P. Ciais, W. Cramer, T. Kato, M. Kuhnert, R. Martin, R. Myneni, A. Rammig, S. Rolinski, J.-F. Soussana, K. Thonicke, M. Van der Velde, and L. Xu
Biogeosciences, 11, 6357–6375, https://doi.org/10.5194/bg-11-6357-2014, https://doi.org/10.5194/bg-11-6357-2014, 2014
Short summary
Short summary
We use a new risk analysis method, and six vegetation models, to analyse how climate change may alter drought risks in European ecosystems. The conclusions are (1) drought will pose increasing risks to productivity in the Mediterranean area; (2) this is because severe droughts will become more frequent, not because ecosystems will become more vulnerable; (3) future C sequestration will be at risk because carbon gain in primary productivity will be more affected than carbon loss in respiration.
N. M. Fyllas, E. Gloor, L. M. Mercado, S. Sitch, C. A. Quesada, T. F. Domingues, D. R. Galbraith, A. Torre-Lezama, E. Vilanova, H. Ramírez-Angulo, N. Higuchi, D. A. Neill, M. Silveira, L. Ferreira, G. A. Aymard C., Y. Malhi, O. L. Phillips, and J. Lloyd
Geosci. Model Dev., 7, 1251–1269, https://doi.org/10.5194/gmd-7-1251-2014, https://doi.org/10.5194/gmd-7-1251-2014, 2014
B. B. L. Cintra, J. Schietti, T. Emillio, D. Martins, G. Moulatlet, P. Souza, C. Levis, C. A. Quesada, and J. Schöngart
Biogeosciences, 10, 7759–7774, https://doi.org/10.5194/bg-10-7759-2013, https://doi.org/10.5194/bg-10-7759-2013, 2013
A. D. A. Castanho, M. T. Coe, M. H. Costa, Y. Malhi, D. Galbraith, and C. A. Quesada
Biogeosciences, 10, 2255–2272, https://doi.org/10.5194/bg-10-2255-2013, https://doi.org/10.5194/bg-10-2255-2013, 2013
Related subject area
Domain: ESSD – Land | Subject: Biogeosciences and biodiversity
The SahulCHAR collection: a palaeofire database for Australia, New Guinea, and New Zealand
ARGO: ARctic greenhouse Gas Observation metadata version 1
WetCH4: a machine-learning-based upscaling of methane fluxes of northern wetlands during 2016–2022
The European Forest Disturbance Atlas: a forest disturbance monitoring system using the Landsat archive
An expert survey on chamber measurement techniques and data handling procedures for methane fluxes
LegacyVegetation: Northern Hemisphere reconstruction of past plant cover and total tree cover from pollen archives of the last 14 kyr
A new habitat map of the Lena Delta in Arctic Siberia based on field and remote sensing datasets
Mapping global leaf inclination angle (LIA) based on field measurement data
A post-processed carbon flux dataset for 34 eddy covariance flux sites across the Heihe River basin, China
Century-long reconstruction of gridded phosphorus surplus across Europe (1850–2019)
High-resolution carbon cycling data from 2019 to 2021 measured at six Austrian long-term ecosystem research sites
Remote sensing of young leaf photosynthetic capacity in tropical and subtropical evergreen broadleaved forests
The JapanFlux2024 dataset for eddy covariance observations covering Japan and East Asia from 1990 to 2023
An organic matter database (OMD): consolidating global residue data from agriculture, fisheries, forestry and related industries
China's annual forest age dataset at 30 m spatial resolution from 1986 to 2022
Gas exchange velocities (k600), gas exchange rates (K600), and hydraulic geometries for streams and rivers derived from the NEON Reaeration field and lab collection data product (DP1.20190.001)
Permafrost-wildfire interactions: Active layer thickness estimates for paired burned and unburned sites in northern high-latitudes
Multi-temporal high-resolution data products of ecosystem structure derived from country-wide airborne laser scanning surveys of the Netherlands
A spectral–structural characterization of European temperate, hemiboreal, and boreal forests
VODCA v2: multi-sensor, multi-frequency vegetation optical depth data for long-term canopy dynamics and biomass monitoring
Crop-specific management history of phosphorus fertilizer input (CMH-P) in the croplands of the United States: reconciliation of top-down and bottom-up data sources
Enhancing long-term vegetation monitoring in Australia: a new approach for harmonising the Advanced Very High Resolution Radiometer normalised-difference vegetation index (NDVI) with MODIS NDVI
Global patterns and drivers of soil dissolved organic carbon concentrations
A synthesized field survey database of vegetation and active-layer properties for the Alaskan tundra (1972–2020)
A vegetation phenology dataset by integrating multiple sources using the Reliability Ensemble Averaging method
TCSIF: a temporally consistent global Global Ozone Monitoring Experiment-2A (GOME-2A) solar-induced chlorophyll fluorescence dataset with the correction of sensor degradation
National forest carbon harvesting and allocation dataset for the period 2003 to 2018
Spatial mapping of key plant functional traits in terrestrial ecosystems across China
HiQ-LAI: a high-quality reprocessed MODIS leaf area index dataset with better spatiotemporal consistency from 2000 to 2022
EUPollMap: the European atlas of contemporary pollen distribution maps derived from an integrated Kriging interpolation approach
Mapping 24 woody plant species phenology and ground forest phenology over China from 1951 to 2020
Sensor-independent LAI/FPAR CDR: reconstructing a global sensor-independent climate data record of MODIS and VIIRS LAI/FPAR from 2000 to 2022
Investigating limnological processes and modern sedimentation at Lake Żabińskie, northeast Poland: a decade-long multi-variable dataset, 2012–2021
Spatiotemporally consistent global dataset of the GIMMS leaf area index (GIMMS LAI4g) from 1982 to 2020
CEDAR-GPP: spatiotemporally upscaled estimates of gross primary productivity incorporating CO2 fertilization
Spatiotemporally consistent global dataset of the GIMMS Normalized Difference Vegetation Index (PKU GIMMS NDVI) from 1982 to 2022
CLIM4OMICS: a geospatially comprehensive climate and multi-OMICS database for maize phenotype predictability in the United States and Canada
Quantifying exchangeable base cations in permafrost: a reserve of nutrients about to thaw
Routine monitoring of western Lake Erie to track water quality changes associated with cyanobacterial harmful algal blooms
The Portuguese Large Wildfire Spread database (PT-FireSprd)
Thirty-meter map of young forest age in China
GRiMeDB: the Global River Methane Database of concentrations and fluxes
A gridded dataset of a leaf-age-dependent leaf area index seasonality product over tropical and subtropical evergreen broadleaved forests
Fire weather index data under historical and shared socioeconomic pathway projections in the 6th phase of the Coupled Model Intercomparison Project from 1850 to 2100
A remote-sensing-based dataset to characterize the ecosystem functioning and functional diversity in the Biosphere Reserve of the Sierra Nevada (southeastern Spain)
A global long-term, high-resolution satellite radar backscatter data record (1992–2022+): merging C-band ERS/ASCAT and Ku-band QSCAT
A global database on holdover time of lightning-ignited wildfires
National CO2 budgets (2015–2020) inferred from atmospheric CO2 observations in support of the global stocktake
Mammals in the Chornobyl Exclusion Zone's Red Forest: a motion-activated camera trap study
Maps with 1 km resolution reveal increases in above- and belowground forest biomass carbon pools in China over the past 20 years
Emma Rehn, Haidee Cadd, Scott Mooney, Tim J. Cohen, Henry Munack, Alexandru T. Codilean, Matthew Adeleye, Kristen K. Beck, Mark Constantine IV, Chris Gouramanis, Johanna M. Hanson, Penelope J. Jones, A. Peter Kershaw, Lydia Mackenzie, Maame Maisie, Michela Mariani, Kia Matley, David McWethy, Keely Mills, Patrick Moss, Nicholas R. Patton, Cassandra Rowe, Janelle Stevenson, John Tibby, and Janet Wilmshurst
Earth Syst. Sci. Data, 17, 2681–2692, https://doi.org/10.5194/essd-17-2681-2025, https://doi.org/10.5194/essd-17-2681-2025, 2025
Short summary
Short summary
This paper presents SahulCHAR, a new collection of palaeofire (ancient fire) records from Australia, New Guinea, and New Zealand. SahulCHAR version 1 contains 687 records of sedimentary charcoal or black carbon, including digitized data, records from existing databases, and original author-submitted data. SahulCHAR is a much-needed update to past charcoal compilations that will also provide greater representation of records from this region in future global syntheses to understand past fire.
Judith Vogt, Martijn M. T. A. Pallandt, Luana S. Basso, Abdullah Bolek, Kseniia Ivanova, Mark Schlutow, Gerardo Celis, McKenzie Kuhn, Marguerite Mauritz, Edward A. G. Schuur, Kyle Arndt, Anna-Maria Virkkala, Isabel Wargowsky, and Mathias Göckede
Earth Syst. Sci. Data, 17, 2553–2573, https://doi.org/10.5194/essd-17-2553-2025, https://doi.org/10.5194/essd-17-2553-2025, 2025
Short summary
Short summary
We present a meta-dataset of greenhouse gas observations in the Arctic and boreal regions, including information on sites where greenhouse gases have been measured using different measurement techniques. We provide a novel repository of metadata to facilitate synthesis efforts for regions undergoing rapid environmental change. The meta-dataset shows where measurements are missing and will be updated as new measurements are published.
Qing Ying, Benjamin Poulter, Jennifer D. Watts, Kyle A. Arndt, Anna-Maria Virkkala, Lori Bruhwiler, Youmi Oh, Brendan M. Rogers, Susan M. Natali, Hilary Sullivan, Amanda Armstrong, Eric J. Ward, Luke D. Schiferl, Clayton D. Elder, Olli Peltola, Annett Bartsch, Ankur R. Desai, Eugénie Euskirchen, Mathias Göckede, Bernhard Lehner, Mats B. Nilsson, Matthias Peichl, Oliver Sonnentag, Eeva-Stiina Tuittila, Torsten Sachs, Aram Kalhori, Masahito Ueyama, and Zhen Zhang
Earth Syst. Sci. Data, 17, 2507–2534, https://doi.org/10.5194/essd-17-2507-2025, https://doi.org/10.5194/essd-17-2507-2025, 2025
Short summary
Short summary
We present daily methane (CH4) fluxes of northern wetlands at 10 km resolution during 2016–2022 (WetCH4) derived from a novel machine learning framework. We estimated an average annual CH4 emission of 22.8 ± 2.4 Tg CH4 yr−1 (15.7–51.6 Tg CH4 yr−1). Emissions were intensified in 2016, 2020, and 2022, with the largest interannual variation coming from Western Siberia. Continued, all-season tower observations and improved soil moisture products are needed for future improvement of CH4 upscaling.
Alba Viana-Soto and Cornelius Senf
Earth Syst. Sci. Data, 17, 2373–2404, https://doi.org/10.5194/essd-17-2373-2025, https://doi.org/10.5194/essd-17-2373-2025, 2025
Short summary
Short summary
Europe's forests are undergoing complex changes in response to increasing disturbances driven by climate and land use changes. Here, we present the European Forest Disturbance Atlas, a satellite-based approach for mapping annual forest disturbances across continental Europe from 1985 onwards. Maps provide insights into the year of disturbance occurrence, the actual frequency of disturbances, severity and the underlying causal agent, thus contributing to a future monitoring system envisioned for Europe.
Katharina Jentzsch, Lona van Delden, Matthias Fuchs, and Claire C. Treat
Earth Syst. Sci. Data, 17, 2331–2372, https://doi.org/10.5194/essd-17-2331-2025, https://doi.org/10.5194/essd-17-2331-2025, 2025
Short summary
Short summary
Methane is a greenhouse gas that contributes to global warming, but we do not fully understand how much is released from natural sources like wetlands. To measure methane over large areas, many measurements are needed, often from small chambers that are placed on the ground. However, different researchers use different measurement setups, making it hard to combine data. We surveyed 36 researchers about their methods, summarized the responses, and identified ways to make the data more comparable.
Laura Schild, Peter Ewald, Chenzhi Li, Raphaël Hébert, Thomas Laepple, and Ulrike Herzschuh
Earth Syst. Sci. Data, 17, 2007–2033, https://doi.org/10.5194/essd-17-2007-2025, https://doi.org/10.5194/essd-17-2007-2025, 2025
Short summary
Short summary
This study reconstructed vegetation and tree cover in the Northern Hemisphere from a harmonized dataset of pollen counts from sediment and peat cores for the past 14 000 years. A model was applied to correct for differences in pollen production between different plants, and modern remote-sensing forest cover was used to validate the reconstructed tree cover. Accurate data on past vegetation are invaluable for the investigation of vegetation–climate dynamics and the validation of vegetation models.
Simeon Lisovski, Alexandra Runge, Iuliia Shevtsova, Nele Landgraf, Anne Morgenstern, Ronald Reagan Okoth, Matthias Fuchs, Nikolay Lashchinskiy, Carl Stadie, Alison Beamish, Ulrike Herzschuh, Guido Grosse, and Birgit Heim
Earth Syst. Sci. Data, 17, 1707–1730, https://doi.org/10.5194/essd-17-1707-2025, https://doi.org/10.5194/essd-17-1707-2025, 2025
Short summary
Short summary
The Lena Delta is the largest river delta in the Arctic and represents a biodiversity hotspot. Here, we describe multiple field datasets and a detailed habitat classification map for the Lena Delta. We present context and methods of these openly available datasets and show how they can improve our understanding of the rapidly changing Arctic tundra system.
Sijia Li and Hongliang Fang
Earth Syst. Sci. Data, 17, 1347–1366, https://doi.org/10.5194/essd-17-1347-2025, https://doi.org/10.5194/essd-17-1347-2025, 2025
Short summary
Short summary
Leaf inclination angle (LIA) is a vital trait in radiative transfer, rainfall interception, evapotranspiration, photosynthesis, and hydrological processes. However, global LIA knowledge is still lacking. This study generated the first global 500 m LIA products by gap-filling LIA measurement data. The global LIA is 41.47° ± 9.55° and increases with latitude. LIA products could enhance our understanding of global LIA and assist remote sensing retrieval and land surface modeling studies.
Xufeng Wang, Tao Che, Jingfeng Xiao, Tonghong Wang, Junlei Tan, Yang Zhang, Zhiguo Ren, Liying Geng, Haibo Wang, Ziwei Xu, Shaomin Liu, and Xin Li
Earth Syst. Sci. Data, 17, 1329–1346, https://doi.org/10.5194/essd-17-1329-2025, https://doi.org/10.5194/essd-17-1329-2025, 2025
Short summary
Short summary
In this study, carbon flux and auxiliary meteorological data are post-processed to create an analysis-ready dataset for 34 sites across six ecosystems in the Heihe River basin. Overall, 18 sites have multi-year observations, while 16 were observed only during the 2012 growing season, totaling 1513 site months. This dataset can be used to explore carbon exchange, assess ecosystem responses to climate change, support upscaling studies, and evaluate carbon cycle models.
Masooma Batool, Fanny J. Sarrazin, and Rohini Kumar
Earth Syst. Sci. Data, 17, 881–916, https://doi.org/10.5194/essd-17-881-2025, https://doi.org/10.5194/essd-17-881-2025, 2025
Short summary
Short summary
Our paper presents a reconstruction and analysis of the gridded P surplus in European landscapes from 1850 to 2019 at a 5 arcmin resolution. By utilizing 48 different estimates, we account for uncertainties in major components of the P surplus. Our findings highlight substantial historical changes, with the total P surplus in the EU 27 tripling over 170 years. Our dataset enables flexible aggregation at various spatial scales, providing critical insights for land and water management strategies.
Thomas Dirnböck, Michael Bahn, Eugenio Diaz-Pines, Ika Djukic, Michael Englisch, Karl Gartner, Günther Gollobich, Johannes Ingrisch, Barbara Kitzler, Karl Knaebel, Johannes Kobler, Andreas Maier, Armin Malli, Ivo Offenthaler, Johannes Peterseil, Gisela Pröll, Sarah Venier, Christoph Wohner, Sophie Zechmeister-Boltenstern, Anita Zolles, and Stephan Glatzel
Earth Syst. Sci. Data, 17, 685–702, https://doi.org/10.5194/essd-17-685-2025, https://doi.org/10.5194/essd-17-685-2025, 2025
Short summary
Short summary
Long-term observation sites have been established in six Austrian locations, covering major ecosystem types such as forests, grasslands, and wetlands. The purpose of these observations is to measure baselines for assessing the impacts of extreme climate events on the carbon cycle. The collected datasets include meteorological variables, soil temperature and moisture, carbon dioxide fluxes, and tree stem growth in forests at a resolution of 15–60 min between 2019 and 2021.
Xueqin Yang, Qingling Sun, Liusheng Han, Wenping Yuan, Jie Tian, Liyang Liu, Wei Zheng, Mei Wang, Yunpeng Wang, and Xiuzhi Chen
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2025-64, https://doi.org/10.5194/essd-2025-64, 2025
Revised manuscript accepted for ESSD
Short summary
Short summary
Understanding how leaves absorb carbon from the atmosphere is essential for predicting changes in global forests. Young leaves play a key role in this process, but their efficiency has been difficult to measure at large scales. Using satellite data, we developed a new method to track the seasonal patterns of young leaves’ photosynthetic capacity from 2001 to 2018. Our dataset helps scientists better understand forest growth and how ecosystems respond to climate change.
Masahito Ueyama, Yuta Takao, Hiromi Yazawa, Makiko Tanaka, Hironori Yabuki, Tomo’omi Kumagai, Hiroki Iwata, Md. Abdul Awal, Mingyuan Du, Yoshinobu Harazono, Yoshiaki Hata, Takashi Hirano, Tsutom Hiura, Reiko Ide, Sachinobu Ishida, Mamoru Ishikawa, Kenzo Kitamura, Yuji Kominami, Shujiro Komiya, Ayumi Kotani, Yuta Inoue, Takashi Machimura, Kazuho Matsumoto, Yojiro Matsuura, Yasuko Mizoguchi, Shohei Murayama, Hirohiko Nagano, Taro Nakai, Tatsuro Nakaji, Ko Nakaya, Shinjiro Ohkubo, Takeshi Ohta, Keisuke Ono, Taku M. Saitoh, Ayaka Sakabe, Takanori Shimizu, Seiji Shimoda, Michiaki Sugita, Kentaro Takagi, Yoshiyuki Takahashi, Naoya Takamura, Satoru Takanashi, Takahiro Takimoto, Yukio Yasuda, Qinxue Wang, Jun Asanuma, Hideo Hasegawa, Tetsuya Hiyama, Yoshihiro Iijima, Shigeyuki Ishidoya, Masayuki Itoh, Tomomichi Kato, Hiroaki Kondo, Yoshiko Kosugi, Tomonori Kume, Takahisa Maeda, Trofim Maximov, Ryo Moriwaki, Hiroyuki Muraoka, Roman Petrov, Jun Suzuki, Shingo Taniguchi, and Kazuhito Ichii
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-615, https://doi.org/10.5194/essd-2024-615, 2025
Revised manuscript accepted for ESSD
Short summary
Short summary
The JapanFlux2024 dataset, created through collaboration across Japan and East Asia, includes eddy covariance data from 79 sites spanning 652 site-years (1990–2023). This comprehensive dataset offers valuable insights into energy, water, and CO2 fluxes, supporting research on land-atmosphere interactions and process models. Compatible with FLUXNET, it fosters global collaboration and advances research in environmental science and regional climate dynamics.
Gudeta Weldesemayat Sileshi, Edmundo Barrios, Johannes Lehmann, and Francesco Nicola Tubiello
Earth Syst. Sci. Data, 17, 369–391, https://doi.org/10.5194/essd-17-369-2025, https://doi.org/10.5194/essd-17-369-2025, 2025
Short summary
Short summary
Agricultural, fishery, forestry and agro-processing activities produce large quantities of residues, by-products and waste materials every year. Here, we present a global organic matter database (OMD), the first of its kind, consolidating estimates of residues and by-products potentially available for use in a circular bio-economy. It also provides definitions, typologies and methods to aid consistent classification, estimation and reporting of the various residues and by-products.
Rong Shang, Xudong Lin, Jing M. Chen, Yunjian Liang, Keyan Fang, Mingzhu Xu, Yulin Yan, Weimin Ju, Guirui Yu, Nianpeng He, Li Xu, Liangyun Liu, Jing Li, Wang Li, Jun Zhai, and Zhongmin Hu
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-574, https://doi.org/10.5194/essd-2024-574, 2025
Revised manuscript accepted for ESSD
Short summary
Short summary
Forest age is critical for carbon cycle modelling and effective forest management. Existing datasets, however, have low spatial resolutions or limited temporal coverage. This study introduces China's Annual Forest Age Dataset (CAFA), spanning 1986–2022 at 30-m resolution. By tracking forest disturbances, we annually update ages. Validation shows small errors for disturbed forests and larger for undisturbed forests. CAFA can enhance carbon cycle modelling and forest management in China.
Kelly S. Aho, Kaelin M. Cawley, Robert T. Hensley, Robert O. Hall Jr., Walter K. Dodds, and Keli J. Goodman
Earth Syst. Sci. Data, 16, 5563–5578, https://doi.org/10.5194/essd-16-5563-2024, https://doi.org/10.5194/essd-16-5563-2024, 2024
Short summary
Short summary
Gas exchange is fundamental to many biogeochemical processes in streams and depends on the degree of gas saturation and the gas transfer velocity (k). Currently, k is harder to measure than concentration. Here, we present a processing pipeline to estimate k from tracer-gas experiments conducted in 22 streams by the National Ecological Observatory Network. The processed dataset (n = 339) represents the largest compilation of standardized k estimates available.
Anna Talucci, Michael M. Loranty, Jean E. Holloway, Brendan M. Rogers, Heather D. Alexander, Natalie Baillargeon, Jennifer L. Baltzer, Logan T. Berner, Amy Breen, Leya Brodt, Brian Buma, Jacqueline Dean, Clement J. F. Delcourt, Lucas R. Diaz, Catherine M. Dieleman, Thomas A. Douglas, Gerald V. Frost, Benjamin V. Gaglioti, Rebecca E. Hewitt, Teresa Hollingsworth, M. Torre Jorgenson, Mark J. Lara, Rachel A. Loehman, Michelle C. Mack, Kristen L. Manies, Christina Minions, Susan M. Natali, Jonathan A. O'Donnell, David Olefeldt, Alison K. Paulson, Adrian V. Rocha, Lisa B. Saperstein, Tatiana A. Shestakova, Seeta Sistla, Oleg Sizov, Andrey Soromotin, Merritt R. Turetsky, Sander Veraverbeke, and Michelle A. Walvoord
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-526, https://doi.org/10.5194/essd-2024-526, 2024
Revised manuscript accepted for ESSD
Short summary
Short summary
Wildfires have the potential to accelerate permafrost thaw and the associated feedbacks to climate change. We assembled a data set of permafrost thaw depth measurements from burned and unburned sites contributed by researchers from across the northern high latitude region. We estimated maximum thaw depth for each measurement, which addresses a key challenge: the ability to assess impacts of wildfire on maximum thaw depth when measurement timing varies.
Yifang Shi and W. Daniel Kissling
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-488, https://doi.org/10.5194/essd-2024-488, 2024
Revised manuscript accepted for ESSD
Short summary
Short summary
We present a new set of multi-temporal LiDAR metrics of ecosystem structure derived from four national ALS surveys of the Netherlands (AHN1–AHN4), capturing vegetation height, cover, and structural variability over the past two decades (1998–2022). Around 70 TB point clouds have been processed to read-to-use raster layers at 10 m resolution (~ 59 GB), enabling a wide use and uptake of ecosystem structure information in biodiversity and habitat monitoring, ecosystem and carbon dynamic modelling.
Miina Rautiainen, Aarne Hovi, Daniel Schraik, Jan Hanuš, Petr Lukeš, Zuzana Lhotáková, and Lucie Homolová
Earth Syst. Sci. Data, 16, 5069–5087, https://doi.org/10.5194/essd-16-5069-2024, https://doi.org/10.5194/essd-16-5069-2024, 2024
Short summary
Short summary
Radiative transfer models play a key role in monitoring vegetation using remote sensing data such as satellite or airborne images. The development of these models has been hindered by a lack of comprehensive ground reference data on structural and spectral characteristics of forests. Here, we reported datasets on the structural and spectral properties of temperate, hemiboreal, and boreal European forest stands. We anticipate that these data will have wide use in remote sensing applications.
Ruxandra-Maria Zotta, Leander Moesinger, Robin van der Schalie, Mariette Vreugdenhil, Wolfgang Preimesberger, Thomas Frederikse, Richard de Jeu, and Wouter Dorigo
Earth Syst. Sci. Data, 16, 4573–4617, https://doi.org/10.5194/essd-16-4573-2024, https://doi.org/10.5194/essd-16-4573-2024, 2024
Short summary
Short summary
VODCA v2 is a dataset providing vegetation indicators for long-term ecosystem monitoring. VODCA v2 comprises two products: VODCA CXKu, spanning 34 years of observations (1987–2021), suitable for monitoring upper canopy dynamics, and VODCA L (2010–2021), for above-ground biomass monitoring. VODCA v2 has lower noise levels than the previous product version and provides valuable insights into plant water dynamics and biomass changes, even in areas where optical data are limited.
Peiyu Cao, Bo Yi, Franco Bilotto, Carlos Gonzalez Fischer, Mario Herrero, and Chaoqun Lu
Earth Syst. Sci. Data, 16, 4557–4572, https://doi.org/10.5194/essd-16-4557-2024, https://doi.org/10.5194/essd-16-4557-2024, 2024
Short summary
Short summary
This article presents a spatially explicit time series dataset reconstructing crop-specific phosphorus fertilizer application rates, timing, and methods at a 4 km × 4 km resolution in the United States from 1850 to 2022. We comprehensively characterized the spatio-temporal dynamics of P fertilizer management over the last 170 years by considering cross-crop variations. This dataset will greatly contribute to the field of agricultural sustainability assessment and Earth system modeling.
Chad A. Burton, Sami W. Rifai, Luigi J. Renzullo, and Albert I. J. M. Van Dijk
Earth Syst. Sci. Data, 16, 4389–4416, https://doi.org/10.5194/essd-16-4389-2024, https://doi.org/10.5194/essd-16-4389-2024, 2024
Short summary
Short summary
Understanding vegetation response to environmental change requires accurate, long-term data on vegetation condition (VC). We evaluated existing satellite VC datasets over Australia and found them lacking, so we developed a new VC dataset for Australia, AusENDVI. It can be used for studying Australia's changing vegetation dynamics and downstream impacts on the carbon and water cycles, and it provides a reliable foundation for further research into the drivers of vegetation change.
Tianjing Ren and Andong Cai
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-343, https://doi.org/10.5194/essd-2024-343, 2024
Revised manuscript accepted for ESSD
Short summary
Short summary
This study compiles a global database of soil dissolved organic carbon (DOC) concentrations, a key factor in soil health and climate change. Using machine learning, it identifies the most influential factors affecting soil DOC levels and maps global patterns. The findings help guide soil management and climate strategies, with the dataset available for further research.
Xiaoran Zhu, Dong Chen, Maruko Kogure, Elizabeth Hoy, Logan T. Berner, Amy L. Breen, Abhishek Chatterjee, Scott J. Davidson, Gerald V. Frost, Teresa N. Hollingsworth, Go Iwahana, Randi R. Jandt, Anja N. Kade, Tatiana V. Loboda, Matt J. Macander, Michelle Mack, Charles E. Miller, Eric A. Miller, Susan M. Natali, Martha K. Raynolds, Adrian V. Rocha, Shiro Tsuyuzaki, Craig E. Tweedie, Donald A. Walker, Mathew Williams, Xin Xu, Yingtong Zhang, Nancy French, and Scott Goetz
Earth Syst. Sci. Data, 16, 3687–3703, https://doi.org/10.5194/essd-16-3687-2024, https://doi.org/10.5194/essd-16-3687-2024, 2024
Short summary
Short summary
The Arctic tundra is experiencing widespread physical and biological changes, largely in response to warming, yet scientific understanding of tundra ecology and change remains limited due to relatively limited accessibility and studies compared to other terrestrial biomes. To support synthesis research and inform future studies, we created the Synthesized Alaskan Tundra Field Dataset (SATFiD), which brings together field datasets and includes vegetation, active-layer, and fire properties.
Yishuo Cui, Shouzhi Chen, Yufeng Gong, Mingwei Li, Zitong Jia, Yuyu Zhou, and Yongshuo H. Fu
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-225, https://doi.org/10.5194/essd-2024-225, 2024
Revised manuscript accepted for ESSD
Short summary
Short summary
Global changes have significantly altered vegetation phenology, affecting terrestrial carbon cycle. While various remote-sensing-based phenology datasets exist, they often suffer from inconsistencies and uncertainties. To address this, we developed a new phenology dataset spanning 1982 to 2022 using a reliability ensemble averaging method. Validated against ground data, our dataset demonstrates substantially improved accuracy, providing a novel and reliable source for global ecological studies.
Chu Zou, Shanshan Du, Xinjie Liu, and Liangyun Liu
Earth Syst. Sci. Data, 16, 2789–2809, https://doi.org/10.5194/essd-16-2789-2024, https://doi.org/10.5194/essd-16-2789-2024, 2024
Short summary
Short summary
To obtain a temporally consistent satellite solar-induced chlorophyll fluorescence
(SIF) product (TCSIF), we corrected for time degradation of GOME-2A using a pseudo-invariant method. After the correction, the global SIF grew by 0.70 % per year from 2007 to 2021, and 62.91 % of vegetated regions underwent an increase in SIF. The dataset is a promising tool for monitoring global vegetation variation and will advance our understanding of vegetation's photosynthetic activities at a global scale.
(SIF) product (TCSIF), we corrected for time degradation of GOME-2A using a pseudo-invariant method. After the correction, the global SIF grew by 0.70 % per year from 2007 to 2021, and 62.91 % of vegetated regions underwent an increase in SIF. The dataset is a promising tool for monitoring global vegetation variation and will advance our understanding of vegetation's photosynthetic activities at a global scale.
Daju Wang, Peiyang Ren, Xiaosheng Xia, Lei Fan, Zhangcai Qin, Xiuzhi Chen, and Wenping Yuan
Earth Syst. Sci. Data, 16, 2465–2481, https://doi.org/10.5194/essd-16-2465-2024, https://doi.org/10.5194/essd-16-2465-2024, 2024
Short summary
Short summary
This study generated a high-precision dataset, locating forest harvested carbon and quantifying post-harvest wood emissions for various uses. It enhances our understanding of forest harvesting and post-harvest carbon dynamics in China, providing essential data for estimating the forest ecosystem carbon budget and emphasizing wood utilization's impact on carbon emissions.
Nannan An, Nan Lu, Weiliang Chen, Yongzhe Chen, Hao Shi, Fuzhong Wu, and Bojie Fu
Earth Syst. Sci. Data, 16, 1771–1810, https://doi.org/10.5194/essd-16-1771-2024, https://doi.org/10.5194/essd-16-1771-2024, 2024
Short summary
Short summary
This study generated a spatially continuous plant functional trait dataset (~1 km) in China in combination with field observations, environmental variables and vegetation indices using machine learning methods. Results showed that wood density, leaf P concentration and specific leaf area showed good accuracy with an average R2 of higher than 0.45. This dataset could provide data support for development of Earth system models to predict vegetation distribution and ecosystem functions.
Kai Yan, Jingrui Wang, Rui Peng, Kai Yang, Xiuzhi Chen, Gaofei Yin, Jinwei Dong, Marie Weiss, Jiabin Pu, and Ranga B. Myneni
Earth Syst. Sci. Data, 16, 1601–1622, https://doi.org/10.5194/essd-16-1601-2024, https://doi.org/10.5194/essd-16-1601-2024, 2024
Short summary
Short summary
Variations in observational conditions have led to poor spatiotemporal consistency in leaf area index (LAI) time series. Using prior knowledge, we leveraged high-quality observations and spatiotemporal correlation to reprocess MODIS LAI, thereby generating HiQ-LAI, a product that exhibits fewer abnormal fluctuations in time series. Reprocessing was done on Google Earth Engine, providing users with convenient access to this value-added data and facilitating large-scale research and applications.
Fabio Oriani, Gregoire Mariethoz, and Manuel Chevalier
Earth Syst. Sci. Data, 16, 731–742, https://doi.org/10.5194/essd-16-731-2024, https://doi.org/10.5194/essd-16-731-2024, 2024
Short summary
Short summary
Modern and fossil pollen data contain precious information for reconstructing the climate and environment of the past. However, these data are only achieved for single locations with no continuity in space. We present here a systematic atlas of 194 digital maps containing the spatial estimation of contemporary pollen presence over Europe. This dataset constitutes a free and ready-to-use tool to study climate, biodiversity, and environment in time and space.
Mengyao Zhu, Junhu Dai, Huanjiong Wang, Juha M. Alatalo, Wei Liu, Yulong Hao, and Quansheng Ge
Earth Syst. Sci. Data, 16, 277–293, https://doi.org/10.5194/essd-16-277-2024, https://doi.org/10.5194/essd-16-277-2024, 2024
Short summary
Short summary
This study utilized 24,552 in situ phenology observation records from the Chinese Phenology Observation Network to model and map 24 woody plant species phenology and ground forest phenology over China from 1951 to 2020. These phenology maps are the first gridded, independent and reliable phenology data sources for China, offering a high spatial resolution of 0.1° and an average deviation of about 10 days. It contributes to more comprehensive research on plant phenology and climate change.
Jiabin Pu, Kai Yan, Samapriya Roy, Zaichun Zhu, Miina Rautiainen, Yuri Knyazikhin, and Ranga B. Myneni
Earth Syst. Sci. Data, 16, 15–34, https://doi.org/10.5194/essd-16-15-2024, https://doi.org/10.5194/essd-16-15-2024, 2024
Short summary
Short summary
Long-term global LAI/FPAR products provide the fundamental dataset for accessing vegetation dynamics and studying climate change. This study develops a sensor-independent LAI/FPAR climate data record based on the integration of Terra-MODIS/Aqua-MODIS/VIIRS LAI/FPAR standard products and applies advanced gap-filling techniques. The SI LAI/FPAR CDR provides a valuable resource for researchers studying vegetation dynamics and their relationship to climate change in the 21st century.
Wojciech Tylmann, Alicja Bonk, Dariusz Borowiak, Paulina Głowacka, Kamil Nowiński, Joanna Piłczyńska, Agnieszka Szczerba, and Maurycy Żarczyński
Earth Syst. Sci. Data, 15, 5093–5103, https://doi.org/10.5194/essd-15-5093-2023, https://doi.org/10.5194/essd-15-5093-2023, 2023
Short summary
Short summary
We present a dataset from the decade-long monitoring of Lake Żabińskie, a hardwater and eutrophic lake in northeast Poland. The lake contains varved sediments, which form a unique archive of past environmental variability. The monitoring program was designed to capture a pattern of relationships between meteorological conditions, limnological processes, and modern sedimentation and to verify if meteorological and limnological phenomena can be precisely tracked with varves.
Sen Cao, Muyi Li, Zaichun Zhu, Zhe Wang, Junjun Zha, Weiqing Zhao, Zeyu Duanmu, Jiana Chen, Yaoyao Zheng, Yue Chen, Ranga B. Myneni, and Shilong Piao
Earth Syst. Sci. Data, 15, 4877–4899, https://doi.org/10.5194/essd-15-4877-2023, https://doi.org/10.5194/essd-15-4877-2023, 2023
Short summary
Short summary
The long-term global leaf area index (LAI) products are critical for characterizing vegetation dynamics under environmental changes. This study presents an updated GIMMS LAI product (GIMMS LAI4g; 1982−2020) based on PKU GIMMS NDVI and massive Landsat LAI samples. With higher accuracy than other LAI products, GIMMS LAI4g removes the effects of orbital drift and sensor degradation in AVHRR data. It has better temporal consistency before and after 2000 and a more reasonable global vegetation trend.
Yanghui Kang, Max Gaber, Maoya Bassiouni, Xinchen Lu, and Trevor Keenan
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2023-337, https://doi.org/10.5194/essd-2023-337, 2023
Revised manuscript accepted for ESSD
Short summary
Short summary
CEDAR-GPP provides spatiotemporally upscaled estimates of Gross Primary Productivity, uniquely incorporating the direct effect of elevated atmospheric CO2 on global photosynthesis. This dataset was produced by upscaling global eddy covariance measurements with multi-source satellite observations and climate data using machine learning. Available at monthly and 0.05° resolution from 1982 to 2020, CEDAR-GPP offers critical insights into ecosystem-climate interaction.
Muyi Li, Sen Cao, Zaichun Zhu, Zhe Wang, Ranga B. Myneni, and Shilong Piao
Earth Syst. Sci. Data, 15, 4181–4203, https://doi.org/10.5194/essd-15-4181-2023, https://doi.org/10.5194/essd-15-4181-2023, 2023
Short summary
Short summary
Long-term global Normalized Difference Vegetation Index (NDVI) products support the understanding of changes in vegetation under environmental changes. This study generates a consistent global NDVI product (PKU GIMMS NDVI) from 1982–2022 that eliminates the issue of orbital drift and sensor degradation in Advanced Very High Resolution Radiometer (AVHRR) data. More accurate than its predecessor (GIMMS NDVI3g), it shows high temporal consistency with MODIS NDVI in describing vegetation trends.
Parisa Sarzaeim, Francisco Muñoz-Arriola, Diego Jarquin, Hasnat Aslam, and Natalia De Leon Gatti
Earth Syst. Sci. Data, 15, 3963–3990, https://doi.org/10.5194/essd-15-3963-2023, https://doi.org/10.5194/essd-15-3963-2023, 2023
Short summary
Short summary
A genomic, phenomic, and climate database for maize phenotype predictability in the US and Canada is introduced. The database encompasses climate from multiple sources and OMICS from the Genomes to Fields initiative (G2F) data from 2014 to 2021, including codes for input data quality and consistency controls. Earth system modelers and breeders can use CLIM4OMICS since it interconnects the climate and biological system sciences. CLIM4OMICS is designed to foster phenotype predictability.
Elisabeth Mauclet, Maëlle Villani, Arthur Monhonval, Catherine Hirst, Edward A. G. Schuur, and Sophie Opfergelt
Earth Syst. Sci. Data, 15, 3891–3904, https://doi.org/10.5194/essd-15-3891-2023, https://doi.org/10.5194/essd-15-3891-2023, 2023
Short summary
Short summary
Permafrost ecosystems are limited in nutrients for vegetation development and constrain the biological activity to the active layer. Upon Arctic warming, permafrost degradation exposes organic and mineral soil material that may directly influence the capacity of the soil to retain key nutrients for vegetation growth and development. Here, we demonstrate that the average total exchangeable nutrient density (Ca, K, Mg, and Na) is more than 2 times higher in the permafrost than in the active layer.
Anna G. Boegehold, Ashley M. Burtner, Andrew C. Camilleri, Glenn Carter, Paul DenUyl, David Fanslow, Deanna Fyffe Semenyuk, Casey M. Godwin, Duane Gossiaux, Thomas H. Johengen, Holly Kelchner, Christine Kitchens, Lacey A. Mason, Kelly McCabe, Danna Palladino, Dack Stuart, Henry Vanderploeg, and Reagan Errera
Earth Syst. Sci. Data, 15, 3853–3868, https://doi.org/10.5194/essd-15-3853-2023, https://doi.org/10.5194/essd-15-3853-2023, 2023
Short summary
Short summary
Western Lake Erie suffers from cyanobacterial harmful algal blooms (HABs) despite decades of international management efforts. In response, the US National Oceanic and Atmospheric Administration (NOAA) Great Lakes Environmental Research Laboratory (GLERL) and the Cooperative Institute for Great Lakes Research (CIGLR) created an annual sampling program to detect, monitor, assess, and predict HABs. Here we describe the data collected from this monitoring program from 2012 to 2021.
Akli Benali, Nuno Guiomar, Hugo Gonçalves, Bernardo Mota, Fábio Silva, Paulo M. Fernandes, Carlos Mota, Alexandre Penha, João Santos, José M. C. Pereira, and Ana C. L. Sá
Earth Syst. Sci. Data, 15, 3791–3818, https://doi.org/10.5194/essd-15-3791-2023, https://doi.org/10.5194/essd-15-3791-2023, 2023
Short summary
Short summary
We reconstructed the spread of 80 large wildfires that burned recently in Portugal and calculated metrics that describe how wildfires behave, such as rate of spread, growth rate, and energy released. We describe the fire behaviour distribution using six percentile intervals that can be easily communicated to both research and management communities. The database will help improve our current knowledge on wildfire behaviour and support better decision making.
Yuelong Xiao, Qunming Wang, Xiaohua Tong, and Peter M. Atkinson
Earth Syst. Sci. Data, 15, 3365–3386, https://doi.org/10.5194/essd-15-3365-2023, https://doi.org/10.5194/essd-15-3365-2023, 2023
Short summary
Short summary
Forest age is closely related to forest production, carbon cycles, and other ecosystem services. Existing stand age products in China derived from remote-sensing images are of a coarse spatial resolution and are not suitable for applications at the regional scale. Here, we mapped young forest ages across China at an unprecedented fine spatial resolution of 30 m. The overall accuracy (OA) of the generated map of young forest stand ages across China was 90.28 %.
Emily H. Stanley, Luke C. Loken, Nora J. Casson, Samantha K. Oliver, Ryan A. Sponseller, Marcus B. Wallin, Liwei Zhang, and Gerard Rocher-Ros
Earth Syst. Sci. Data, 15, 2879–2926, https://doi.org/10.5194/essd-15-2879-2023, https://doi.org/10.5194/essd-15-2879-2023, 2023
Short summary
Short summary
The Global River Methane Database (GRiMeDB) presents CH4 concentrations and fluxes for flowing waters and concurrent measures of CO2, N2O, and several physicochemical variables, plus information about sample locations and methods used to measure gas fluxes. GRiMeDB is intended to increase opportunities to understand variation in fluvial CH4, test hypotheses related to greenhouse gas dynamics, and reduce uncertainty in future estimates of gas emissions from world streams and rivers.
Xueqin Yang, Xiuzhi Chen, Jiashun Ren, Wenping Yuan, Liyang Liu, Juxiu Liu, Dexiang Chen, Yihua Xiao, Qinghai Song, Yanjun Du, Shengbiao Wu, Lei Fan, Xiaoai Dai, Yunpeng Wang, and Yongxian Su
Earth Syst. Sci. Data, 15, 2601–2622, https://doi.org/10.5194/essd-15-2601-2023, https://doi.org/10.5194/essd-15-2601-2023, 2023
Short summary
Short summary
We developed the first time-mapped, continental-scale gridded dataset of monthly leaf area index (LAI) in three leaf age cohorts (i.e., young, mature, and old) from 2001–2018 data (referred to as Lad-LAI). The seasonality of three LAI cohorts from the new Lad-LAI product agrees well at eight sites with very fine-scale collections of monthly LAI. The proposed satellite-based approaches can provide references for mapping finer spatiotemporal-resolution LAI products with different leaf age cohorts.
Yann Quilcaille, Fulden Batibeniz, Andreia F. S. Ribeiro, Ryan S. Padrón, and Sonia I. Seneviratne
Earth Syst. Sci. Data, 15, 2153–2177, https://doi.org/10.5194/essd-15-2153-2023, https://doi.org/10.5194/essd-15-2153-2023, 2023
Short summary
Short summary
We present a new database of four annual fire weather indicators over 1850–2100 and over all land areas. In a 3°C warmer world with respect to preindustrial times, the mean fire weather would increase on average by at least 66% in both intensity and duration and even triple for 1-in-10-year events. The dataset is a freely available resource for fire danger studies and beyond, highlighting that the best course of action would require limiting global warming as much as possible.
Beatriz P. Cazorla, Javier Cabello, Andrés Reyes, Emilio Guirado, Julio Peñas, Antonio J. Pérez-Luque, and Domingo Alcaraz-Segura
Earth Syst. Sci. Data, 15, 1871–1887, https://doi.org/10.5194/essd-15-1871-2023, https://doi.org/10.5194/essd-15-1871-2023, 2023
Short summary
Short summary
This dataset provides scientists, environmental managers, and the public in general with valuable information on the first characterization of ecosystem functional diversity based on primary production developed in the Sierra Nevada (Spain), a biodiversity hotspot in the Mediterranean basin and an exceptional natural laboratory for ecological research within the Long-Term Social-Ecological Research (LTSER) network.
Shengli Tao, Zurui Ao, Jean-Pierre Wigneron, Sassan Saatchi, Philippe Ciais, Jérôme Chave, Thuy Le Toan, Pierre-Louis Frison, Xiaomei Hu, Chi Chen, Lei Fan, Mengjia Wang, Jiangling Zhu, Xia Zhao, Xiaojun Li, Xiangzhuo Liu, Yanjun Su, Tianyu Hu, Qinghua Guo, Zhiheng Wang, Zhiyao Tang, Yi Y. Liu, and Jingyun Fang
Earth Syst. Sci. Data, 15, 1577–1596, https://doi.org/10.5194/essd-15-1577-2023, https://doi.org/10.5194/essd-15-1577-2023, 2023
Short summary
Short summary
We provide the first long-term (since 1992), high-resolution (8.9 km) satellite radar backscatter data set (LHScat) with a C-band (5.3 GHz) signal dynamic for global lands. LHScat was created by fusing signals from ERS (1992–2001; C-band), QSCAT (1999–2009; Ku-band), and ASCAT (since 2007; C-band). LHScat has been validated against independent ERS-2 signals. It could be used in a variety of studies, such as vegetation monitoring and hydrological modelling.
Jose V. Moris, Pedro Álvarez-Álvarez, Marco Conedera, Annalie Dorph, Thomas D. Hessilt, Hugh G. P. Hunt, Renata Libonati, Lucas S. Menezes, Mortimer M. Müller, Francisco J. Pérez-Invernón, Gianni B. Pezzatti, Nicolau Pineda, Rebecca C. Scholten, Sander Veraverbeke, B. Mike Wotton, and Davide Ascoli
Earth Syst. Sci. Data, 15, 1151–1163, https://doi.org/10.5194/essd-15-1151-2023, https://doi.org/10.5194/essd-15-1151-2023, 2023
Short summary
Short summary
This work describes a database on holdover times of lightning-ignited wildfires (LIWs). Holdover time is defined as the time between lightning-induced fire ignition and fire detection. The database contains 42 datasets built with data on more than 152 375 LIWs from 13 countries in five continents from 1921 to 2020. This database is the first freely-available, harmonized and ready-to-use global source of holdover time data, which may be used to investigate LIWs and model the holdover phenomenon.
Brendan Byrne, David F. Baker, Sourish Basu, Michael Bertolacci, Kevin W. Bowman, Dustin Carroll, Abhishek Chatterjee, Frédéric Chevallier, Philippe Ciais, Noel Cressie, David Crisp, Sean Crowell, Feng Deng, Zhu Deng, Nicholas M. Deutscher, Manvendra K. Dubey, Sha Feng, Omaira E. García, David W. T. Griffith, Benedikt Herkommer, Lei Hu, Andrew R. Jacobson, Rajesh Janardanan, Sujong Jeong, Matthew S. Johnson, Dylan B. A. Jones, Rigel Kivi, Junjie Liu, Zhiqiang Liu, Shamil Maksyutov, John B. Miller, Scot M. Miller, Isamu Morino, Justus Notholt, Tomohiro Oda, Christopher W. O'Dell, Young-Suk Oh, Hirofumi Ohyama, Prabir K. Patra, Hélène Peiro, Christof Petri, Sajeev Philip, David F. Pollard, Benjamin Poulter, Marine Remaud, Andrew Schuh, Mahesh K. Sha, Kei Shiomi, Kimberly Strong, Colm Sweeney, Yao Té, Hanqin Tian, Voltaire A. Velazco, Mihalis Vrekoussis, Thorsten Warneke, John R. Worden, Debra Wunch, Yuanzhi Yao, Jeongmin Yun, Andrew Zammit-Mangion, and Ning Zeng
Earth Syst. Sci. Data, 15, 963–1004, https://doi.org/10.5194/essd-15-963-2023, https://doi.org/10.5194/essd-15-963-2023, 2023
Short summary
Short summary
Changes in the carbon stocks of terrestrial ecosystems result in emissions and removals of CO2. These can be driven by anthropogenic activities (e.g., deforestation), natural processes (e.g., fires) or in response to rising CO2 (e.g., CO2 fertilization). This paper describes a dataset of CO2 emissions and removals derived from atmospheric CO2 observations. This pilot dataset informs current capabilities and future developments towards top-down monitoring and verification systems.
Nicholas A. Beresford, Sergii Gashchak, Michael D. Wood, and Catherine L. Barnett
Earth Syst. Sci. Data, 15, 911–920, https://doi.org/10.5194/essd-15-911-2023, https://doi.org/10.5194/essd-15-911-2023, 2023
Short summary
Short summary
Camera traps were established in a highly contaminated area of the Chornobyl Exclusion Zone (CEZ) to capture images of mammals. Over 1 year, 14 mammal species were recorded. The number of species observed did not vary with estimated radiation exposure. The data will be of value from the perspectives of effects of radiation on wildlife and also rewilding in this large, abandoned area. They may also have value in future studies investigating impacts of recent Russian military action in the CEZ.
Yongzhe Chen, Xiaoming Feng, Bojie Fu, Haozhi Ma, Constantin M. Zohner, Thomas W. Crowther, Yuanyuan Huang, Xutong Wu, and Fangli Wei
Earth Syst. Sci. Data, 15, 897–910, https://doi.org/10.5194/essd-15-897-2023, https://doi.org/10.5194/essd-15-897-2023, 2023
Short summary
Short summary
This study presented a long-term (2002–2021) above- and belowground biomass dataset for woody vegetation in China at 1 km resolution. It was produced by combining various types of remote sensing observations with adequate plot measurements. Over 2002–2021, China’s woody biomass increased at a high rate, especially in the central and southern parts. This dataset can be applied to evaluate forest carbon sinks across China and the efficiency of ecological restoration programs in China.
Cited articles
Barrow, N. J., Sen, A., Roy, N., and Debnath, A.: The Soil Phosphate Fractionation Fallacy, Plant Soil, 459, 1–11, https://doi.org/10.1007/s11104-020-04476-6, 2020.
Bookhagen, B. and Strecker, M. R.: Orographic Barriers, High-Resolution Trmm Rainfall, and Relief Variations Along the Eastern Andes, Geophys. Res. Lett., 35, L06403, https://doi.org/10.1029/2007gl032011, 2008.
Breiman, L.: Random Forests, Mach. Learn., 45, 5–32, https://doi.org/10.1023/A:1010933404324, 2001.
Buendía, C., Arens, S., Hickler, T., Higgins, S. I., Porada, P., and Kleidon, A.: On the potential vegetation feedbacks that enhance phosphorus availability – insights from a process-based model linking geological and ecological timescales, Biogeosciences, 11, 3661–3683, https://doi.org/10.5194/bg-11-3661-2014, 2014.
Carter, M. R. and Gregorich, E. G. (Eds.): Soil Sampling and Methods of Analysis, 2nd edn., CRC Press, Boca Raton, FL, 1224 pp., https://doi.org/10.1201/9781420005271, 2007.
Carvalho, R. L., Resende, A. F., Barlow, J., Franca, F. M., Moura, M. R., Maciel, R., Alves-Martins, F., Shutt, J., Nunes, C. A., Elias, F., Silveira, J. M., Stegmann, L., Baccaro, F. B., Juen, L., Schietti, J., Aragao, L., Berenguer, E., Castello, L., Costa, F. R. C., Guedes, M. L., Leal, C. G., Lees, A. C., Isaac, V., Nascimento, R. O., Phillips, O. L., Schmidt, F. A., Ter Steege, H., Vaz-de-Mello, F., Venticinque, E. M., Vieira, I. C. G., Zuanon, J., Synergize, C., and Ferreira, J.: Pervasive Gaps in Amazonian Ecological Research, Curr. Biol., 33, 3495–3504, https://doi.org/10.1016/j.cub.2023.06.077, 2023.
Castanho, A. D. A., Coe, M. T., Costa, M. H., Malhi, Y., Galbraith, D., and Quesada, C. A.: Improving simulated Amazon forest biomass and productivity by including spatial variation in biophysical parameters, Biogeosciences, 10, 2255–2272, https://doi.org/10.5194/bg-10-2255-2013, 2013.
Crameri, F.: Scientific Colour Maps, Zenodo [data set], https://doi.org/10.5281/ZENODO.5501399, 2021.
Crameri, F., Shephard, G. E., and Heron, P. J.: The Misuse of Colour in Science Communication, Nat. Commun., 11, 5444, https://doi.org/10.1038/s41467-020-19160-7, 2020.
Crews, T. E., Kitayama, K., Fownes, J. H., Riley, R. H., Herbert, D. A., Muellerdombois, D., and Vitousek, P. M.: Changes in Soil-Phosphorus Fractions and Ecosystem Dynamics across a Long Chronosequence in Hawaii, Ecology, 76, 1407–1424, https://doi.org/10.2307/1938144, 1995.
Cunha, H. F. V., Andersen, K. M., Lugli, L. F., Santana, F. D., Aleixo, I. F., Moraes, A. M., Garcia, S., Di Ponzio, R., Mendoza, E. O., Brum, B., Rosa, J. S., Cordeiro, A. L., Portela, B. T. T., Ribeiro, G., Coelho, S. D., de Souza, S. T., Silva, L. S., Antonieto, F., Pires, M., Salomao, A. C., Miron, A. C., de Assis, R. L., Domingues, T. F., Aragao, L., Meir, P., Camargo, J. L., Manzi, A. O., Nagy, L., Mercado, L. M., Hartley, I. P., and Quesada, C. A.: Direct Evidence for Phosphorus Limitation on Amazon Forest Productivity, Nature, 608, 558–562, https://doi.org/10.1038/s41586-022-05085-2, 2022.
Cutler, A., Cutler, D. R., and Stevens, J. R.: Random Forests, in: Ensemble Machine Learning, edited by: Zhang, C., and Ma, Y., Springer US, 157–175, https://doi.org/10.1007/978-1-4419-9326-7_5, 2012.
Darela-Filho, J. P.: Reference Maps of Soil Phosphorus for the Pan-Amazon Region: Source Code and Input Data, Zenodo [code], https://doi.org/10.5281/zenodo.10571880, 2024.
Darela-Filho, J. P. and Lapola, D. M.: Reference Maps of Soil Phosphorus for the Pan-Amazon Region: Code and Data, REDU – Repositório de Dados de Pesquisa da Unicamp [data set], https://doi.org/10.25824/redu/FROESE, 2023.
da Silva, E. C., da Silva Sales, M. V., Aleixo, S., Gama-Rodrigues, A. C., and Gama-Rodrigues, E. F.: Does Structural Equation Modeling Provide a Holistic View of Phosphorus Acquisition Strategies in Soils of Amazon Forest?, J. Soil Sci. Plant Nut., 22, 3334–3347, https://doi.org/10.1007/s42729-022-00890-0, 2022.
de Myttenaere, A., Golden, B., Le Grand, B., and Rossi, F.: Mean Absolute Percentage Error for Regression Models, Neurocomputing, 192, 38–48, https://doi.org/10.1016/j.neucom.2015.12.114, 2016.
Dijkshoorn, J. A., Huting, J. R. M., and P., T.: Update of the 1:5 Million Soil and Terrain Database for Latin America and the Caribbean (Soterlac; Version 2.0), ISRIC – World Soil Information, Wageningen, https://isric.org/sites/default/files/isric_report_2005_01.pdf (last access: 20 October 2023), 2005.
Du, E. Z., Terrer, C., Pellegrini, A. F. A., Ahlstrom, A., van Lissa, C. J., Zhao, X., Xia, N., Wu, X. H., and Jackson, R. B.: Global Patterns of Terrestrial Nitrogen and Phosphorus Limitation, Nat. Geosci., 13, 221–226, https://doi.org/10.1038/s41561-019-0530-4, 2020.
Farr, T. G., Rosen, P. A., Caro, E., Crippen, R., Duren, R., Hensley, S., Kobrick, M., Paller, M., Rodriguez, E., Roth, L., Seal, D., Shaffer, S., Shimada, J., Umland, J., Werner, M., Oskin, M., Burbank, D., and Alsdorf, D.: The Shuttle Radar Topography Mission, Rev. Geophys., 45, RG2004, https://doi.org/10.1029/2005rg000183, 2007.
Fick, S. E. and Hijmans, R. J.: Worldclim 2: New 1-Km Spatial Resolution Climate Surfaces for Global Land Areas, Int. J. Climatol., 37, 4302–4315, https://doi.org/10.1002/joc.5086, 2017.
Gama-Rodrigues, A. C., Sales, M. V. S., Silva, P. S. D., Comerford, N. B., Cropper, W. P., and Gama-Rodrigues, E. F.: An Exploratory Analysis of Phosphorus Transformations in Tropical Soils Using Structural Equation Modeling, Biogeochemistry, 118, 453–469, https://doi.org/10.1007/s10533-013-9946-x, 2014.
Goldstein, A., Kapelner, A., Bleich, J., and Pitkin, E.: Peeking inside the Black Box: Visualizing Statistical Learning with Plots of Individual Conditional Expectation, arXiv [preprint], https://doi.org/10.48550/arXiv.1309.6392, 20 March 2014.
Goll, D. S., Brovkin, V., Parida, B. R., Reick, C. H., Kattge, J., Reich, P. B., van Bodegom, P. M., and Niinemets, Ü.: Nutrient limitation reduces land carbon uptake in simulations with a model of combined carbon, nitrogen and phosphorus cycling, Biogeosciences, 9, 3547–3569, https://doi.org/10.5194/bg-9-3547-2012, 2012.
Gu, C. H. and Margenot, A. J.: Navigating Limitations and Opportunities of Soil Phosphorus Fractionation, Plant Soil, 459, 13–17, https://doi.org/10.1007/s11104-020-04552-x, 2021.
Hastie, T., Friedman, J., and Tibshirani, R.: The Elements of Statistical Learning, Springer Series in Statistics, Springer, New York, NY, XVI, 536 pp., https://doi.org/10.1007/978-0-387-21606-5, 2001.
He, X., Augusto, L., Goll, D. S., Ringeval, B., Wang, Y., Helfenstein, J., Huang, Y., Yu, K., Wang, Z., Yang, Y., and Hou, E.: Global patterns and drivers of soil total phosphorus concentration, Earth Syst. Sci. Data, 13, 5831–5846, https://doi.org/10.5194/essd-13-5831-2021, 2021.
He, X., Augusto, L., Goll, D. S., Ringeval, B., Wang, Y.-P., Helfenstein, J., Huang, Y., and Hou, E.: Global patterns and drivers of phosphorus fractions in natural soils, Biogeosciences, 20, 4147–4163, https://doi.org/10.5194/bg-20-4147-2023, 2023.
Hedley, M. J. and Stewart, J. W. B.: Method to Measure Microbial Phosphate in Soils, Soil Biol. Biochem., 14, 377–385, https://doi.org/10.1016/0038-0717(82)90009-8, 1982.
Hedley, M. J., Stewart, J. W. B., and Chauhan, B. S.: Changes in Inorganic and Organic Soil-Phosphorus Fractions Induced by Cultivation Practices and by Laboratory Incubations, Soil Sci. Soc. Am. J., 46, 970–976, https://doi.org/10.2136/sssaj1982.03615995004600050017x, 1982.
Helfenstein, J., Tamburini, F., von Sperber, C., Massey, M. S., Pistocchi, C., Chadwick, O. A., Vitousek, P. M., Kretzschmar, R., and Frossard, E.: Combining Spectroscopic and Isotopic Techniques Gives a Dynamic View of Phosphorus Cycling in Soil, Nat. Commun., 9, 3226, https://doi.org/10.1038/s41467-018-05731-2, 2018.
Helfenstein, J., Pistocchi, C., Oberson, A., Tamburini, F., Goll, D. S., and Frossard, E.: Estimates of mean residence times of phosphorus in commonly considered inorganic soil phosphorus pools, Biogeosciences, 17, 441–454, https://doi.org/10.5194/bg-17-441-2020, 2020.
Hou, E., Tan, X., Heenan, M., and Wen, D.: A Global Dataset of Plant Available and Unavailable Phosphorus in Natural Soils Derived by Hedley Method, Sci. Data, 5, 180166, https://doi.org/10.1038/sdata.2018.166, 2018.
Howe, J. A. and Smith, A. P.: The Soil Habitat, in: Principles and Applications of Soil Microbiology, edited by: Gentry, T. J., Fuhrmann, J. J., and Zuberer, D. A., Elsevier, 23–55, https://doi.org/10.1016/b978-0-12-820202-9.00002-2, 2021.
Kuhn, M. and Johnson, K.: Applied Predictive Modeling, 1, Springer, New York, NY, https://doi.org/10.1007/978-1-4614-6849-3, 2013.
Lambers, H.: Phosphorus Acquisition and Utilization in Plants, Annu. Rev. Plant Biol., 73, 17–42, https://doi.org/10.1146/annurev-arplant-102720-125738, 2022.
Lambers, H., Raven, J. A., Shaver, G. R., and Smith, S. E.: Plant Nutrient-Acquisition Strategies Change with Soil Age, Trends Ecol. Evol., 23, 95–103, https://doi.org/10.1016/j.tree.2007.10.008, 2008.
Liese, R., Schulze, J., and Cabeza, R. A.: Nitrate Application or P Deficiency Induce a Decline in Medicago Truncatula N(2)-Fixation by Similar Changes in the Nodule Transcriptome, Sci. Rep., 7, 46264, https://doi.org/10.1038/srep46264, 2017.
Lloyd, J., Domingues, T. F., Schrodt, F., Ishida, F. Y., Feldpausch, T. R., Saiz, G., Quesada, C. A., Schwarz, M., Torello-Raventos, M., Gilpin, M., Marimon, B. S., Marimon-Junior, B. H., Ratter, J. A., Grace, J., Nardoto, G. B., Veenendaal, E., Arroyo, L., Villarroel, D., Killeen, T. J., Steininger, M., and Phillips, O. L.: Edaphic, structural and physiological contrasts across Amazon Basin forest–savanna ecotones suggest a role for potassium as a key modulator of tropical woody vegetation structure and function, Biogeosciences, 12, 6529–6571, https://doi.org/10.5194/bg-12-6529-2015, 2015.
Lucas, T. C. D.: A Translucent Box: Interpretable Machine Learning in Ecology, Ecol. Monogr., 90, e01422, https://doi.org/10.1002/ecm.1422, 2020.
Lugli, L. F., Andersen, K. M., Aragao, L. E. O. C., Cordeiro, A. L., Cunha, H. K. V., Fuchslueger, L., Meir, P., Mercado, L. M., Oblitas, E., Quesada, C. A., Rosa, J. S., Schaap, K. J., Valverde-Barrantes, O., and Hartley, I. P.: Multiple Phosphorus Acquisition Strategies Adopted by Fine Roots in Low-Fertility Soils in Central Amazonia, Plant Soil, 450, 49–63, https://doi.org/10.1007/s11104-019-03963-9, 2020.
Meyer, H. and Pebesma, E.: Predicting into Unknown Space? Estimating the Area of Applicability of Spatial Prediction Models, Methods Ecol. Evol., 12, 1620–1633, https://doi.org/10.1111/2041-210x.13650, 2021.
Osman, K. T.: Sandy Soils, in: Management of Soil Problems, Springer International Publishing, Cham, Switzerland, 37–65, https://doi.org/10.1007/978-3-319-75527-4_3, 2018.
Pedregosa, F., Varoquaux, G., Gramfort, A., Michel, V., Thirion, B., Grisel, O., Blondel, M., Prettenhofer, P., Weiss, R., Dubourg, V., Vanderplas, J., Passos, A., Cournapeau, D., Brucher, M., Perrot, M., and Duchesnay, E.: Scikit-Learn: Machine Learning in Python, J. Mach. Learn. Res., 12, 2825–2830, 2011.
Poggio, L., de Sousa, L. M., Batjes, N. H., Heuvelink, G. B. M., Kempen, B., Ribeiro, E., and Rossiter, D.: SoilGrids 2.0: producing soil information for the globe with quantified spatial uncertainty, SOIL, 7, 217–240, https://doi.org/10.5194/soil-7-217-2021, 2021.
Quesada, C. A., Lloyd, J., Schwarz, M., Patiño, S., Baker, T. R., Czimczik, C., Fyllas, N. M., Martinelli, L., Nardoto, G. B., Schmerler, J., Santos, A. J. B., Hodnett, M. G., Herrera, R., Luizão, F. J., Arneth, A., Lloyd, G., Dezzeo, N., Hilke, I., Kuhlmann, I., Raessler, M., Brand, W. A., Geilmann, H., Moraes Filho, J. O., Carvalho, F. P., Araujo Filho, R. N., Chaves, J. E., Cruz Junior, O. F., Pimentel, T. P., and Paiva, R.: Variations in chemical and physical properties of Amazon forest soils in relation to their genesis, Biogeosciences, 7, 1515–1541, https://doi.org/10.5194/bg-7-1515-2010, 2010.
Quesada, C. A., Lloyd, J., Anderson, L. O., Fyllas, N. M., Schwarz, M., and Czimczik, C. I.: Soils of Amazonia with particular reference to the RAINFOR sites, Biogeosciences, 8, 1415–1440, https://doi.org/10.5194/bg-8-1415-2011, 2011.
Quesada, C. A., Paz, C., Oblitas Mendoza, E., Phillips, O. L., Saiz, G., and Lloyd, J.: Variations in soil chemical and physical properties explain basin-wide Amazon forest soil carbon concentrations, SOIL, 6, 53–88, https://doi.org/10.5194/soil-6-53-2020, 2020.
RAINFOR: Amazon Forest Inventory Network – Manuals, http://rainfor.org/en/manuals/in-the-field, last access: 7 April 2022.
RAISG: Amazon Network of Georeferenced Socio-Environmental Information, https://www.raisg.org/en/about/, last access: 20 October 2023.
Reed, S. C., Cleveland, C. C., and Townsend, A. R.: Relationships among Phosphorus, Molybdenum and Free-Living Nitrogen Fixation in Tropical Rain Forests: Results from Observational and Experimental Analyses, Biogeochemistry, 114, 135–147, https://doi.org/10.1007/s10533-013-9835-3, 2013.
Reichert, T., Rammig, A., Fuchslueger, L., Lugli, L. F., Quesada, C. A., and Fleischer, K.: Plant Phosphorus-Use and -Acquisition Strategies in Amazonia, New Phytol., 234, 1126–1143, https://doi.org/10.1111/nph.17985, 2022.
Saatchi, S. S.: Lba-Eco Lc-15 Srtm30 Digital Elevation Model Data, Amazon Basin: 2000, ORNL DAAC [data set], https://doi.org/10.3334/ORNLDAAC/1181, 2013.
Schubert, S., Steffens, D., and Ashraf, I.: Is Occluded Phosphate Plant-Available?, J. Plant Nutr. Soil Sc., 183, 338–344, https://doi.org/10.1002/jpln.201900402, 2020.
Simon, S. M., Glaum, P., and Valdovinos, F. S.: Interpreting Random Forest Analysis of Ecological Models to Move from Prediction to Explanation, Sci. Rep., 13, 3881, https://doi.org/10.1038/s41598-023-30313-8, 2023.
Smeck, N. E.: Phosphorus Dynamics in Soils and Landscapes, Geoderma, 36, 185–199, https://doi.org/10.1016/0016-7061(85)90001-1, 1985.
Stone, M.: Cross-Validatory Choice and Assessment of Statistical Predictions, J. Roy. Stat. Soc. B Met., 36, 111–133, https://doi.org/10.1111/j.2517-6161.1974.tb00994.x, 1974.
Val, P., Figueiredo, J., Melo, G., Flantua, S. G. A., Quesada, C. A., Fan, Y., Albert, J. S., Guayasamin, J. M., and Hoorn, C.: Geological History and Geodiversity of the Amazon, in: Amazon Assessment Report 2021, edited by: Nobre, C., Encalada, A., Anderson, E., Roca, A. F. H., Bustamante, M., Mena, C., Peña-Claros, M., Poveda, G., Rodriguez, J. P., Saleska, S., Trumbore, S., Val, A. L., Villa, N. L., Abramovay, R., Alencar, A., Rodríguez, A. C., Armenteras, D., Artaxo, P., Athayde, S., Barretto Filho, H. T., Barlow, J., Berenguer, E., Bortolotto, F., Costa, F. A., Costa, M. H., Cuvi, N., Fearnside, P. M., Ferreira, J., Flores, B. M., Frieri, S., Gatti, L. V., Guayasamin, J. M., Hecht, S., Hirota, M., Hoorn, C., Josse, C., Lapola, D. M., Larrea, C., Larrea-Alcazar, D. M., Lehm, A. Z., Malhi, Y., Marengo, J. A., Melack, J., Moraes, R. M., Moutinho, P., Murmis, M. R., Neves, E. G., Paez, B., Painter, L., Ramos, A., Rosero-Peña, M. C., Schmink, M., Sist, P., ter Steege, H., van der Voort, H., Varese, M., and Zapata-Ríos, G.: United Nations Sustainable Development Solutions Network, New York, USA, https://doi.org/10.55161/POFE6241, 2021.
Van Langenhove, L., Depaepe, T., Verryckt, L. T., Vallicrosa, H., Fuchslueger, L., Lugli, L. F., Bréchet, L., Ogaya, R., Llusia, J., Urbina, I., Gargallo-Garriga, A., Grau, O., Richter, A., Penuelas, J., Van Der Straeten, D., and Janssens, I. A.: Impact of Nutrient Additions on Free-Living Nitrogen Fixation in Litter and Soil of Two French-Guianese Lowland Tropical Forests, J. Geophys. Res.-Biogeo., 126, e2020JG006023, https://doi.org/10.1029/2020jg006023, 2021.
Vitousek, P. M., Porder, S., Houlton, B. Z., and Chadwick, O. A.: Terrestrial Phosphorus Limitation: Mechanisms, Implications, and Nitrogen-Phosphorus Interactions, Ecol. Appl., 20, 5–15, https://doi.org/10.1890/08-0127.1, 2010.
Walker, T. W. and Syers, J. K.: Fate of Phosphorus During Pedogenesis, Geoderma, 15, 1–19, https://doi.org/10.1016/0016-7061(76)90066-5, 1976.
Wang, Y. P., Law, R. M., and Pak, B.: A global model of carbon, nitrogen and phosphorus cycles for the terrestrial biosphere, Biogeosciences, 7, 2261–2282, https://doi.org/10.5194/bg-7-2261-2010, 2010.
Wilcke, W., Velescu, A., Leimer, S., Bigalke, M., Boy, J., and Valarezo, C.: Temporal Trends of Phosphorus Cycling in a Tropical Montane Forest in Ecuador During 14 years, J. Geophys. Res.-Biogeo., 124, 1370–1386, https://doi.org/10.1029/2018jg004942, 2019.
Wittmann, H., von Blanckenburg, F., Maurice, L., Guyot, J. L., Filizola, N., and Kubik, P. W.: Sediment Production and Delivery in the Amazon River Basin Quantified by in Situ-Produced Cosmogenic Nuclides and Recent River Loads, Geol. Soc. Am. Bull., 123, 934–950, https://doi.org/10.1130/B30317.1, 2011.
Wollast, R., Mackenzie, F. T., and Chou, L.: Interactions of C, N, P and S Biogeochemical Cycles and Global Change, Nato Asi Series. Series I: Global Environmental Change, Springer, Berlin, Heidelberg, 521 pp., https://doi.org/10.1007/978-3-642-76064-8, 1993.
Wong, M. Y., Neill, C., Marino, R., Silvério, D. V., Brando, P. M., and Howarth, R. W.: Biological Nitrogen Fixation Does Not Replace Nitrogen Losses after Forest Fires in the Southeastern Amazon, Ecosystems, 23, 1037–1055, https://doi.org/10.1007/s10021-019-00453-y, 2020.
Yang, X. and Post, W. M.: Phosphorus transformations as a function of pedogenesis: A synthesis of soil phosphorus data using Hedley fractionation method, Biogeosciences, 8, 2907–2916, https://doi.org/10.5194/bg-8-2907-2011, 2011.
Yang, X., Post, W. M., Thornton, P. E., and Jain, A.: The distribution of soil phosphorus for global biogeochemical modeling, Biogeosciences, 10, 2525–2537, https://doi.org/10.5194/bg-10-2525-2013, 2013.
Yang, X., Post, W. M., Thornton, P. E., and Jain, A. K.: Global Gridded Soil Phosphorus Distribution Maps at 0.5-Degree Resolution, ORNL DAAC [data set], https://doi.org/10.3334/ORNLDAAC/1223, 2014.
Zhang, L. M., Silvano, E., Rihtman, B., Aguilo-Ferretjans, M., Han, B., Shi, W., and Chen, Y.: Biochemical Mechanism of Phosphorus Limitation Impairing Nitrogen Fixation in Diazotrophic Bacterium Klebsiella Variicola, Journal of Sustainable Agriculture and Environment, 1, 108–117, https://doi.org/10.1002/sae2.12024, 2022.
Short summary
Phosphorus (P) is crucial for plant growth, and scientists have created models to study how it interacts with carbon cycle in ecosystems. To apply these models, it is important to know the distribution of phosphorus in soil. In this study we estimated the distribution of phosphorus in the Amazon region. The results showed a clear gradient of soil development and P content. These maps can help improve ecosystem models and generate new hypotheses about phosphorus availability in the Amazon.
Phosphorus (P) is crucial for plant growth, and scientists have created models to study how it...
Altmetrics
Final-revised paper
Preprint