Articles | Volume 13, issue 10
https://doi.org/10.5194/essd-13-4913-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Special issue:
https://doi.org/10.5194/essd-13-4913-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Data description paper
| 
26 Oct 2021
Data description paper |
| 26 Oct 2021
| 26 Oct 2021
An 18S V4 rRNA metabarcoding dataset of protist diversity in the Atlantic inflow to the Arctic Ocean, through the year and down to 1000 m depth
Department of Biosciences, Section for Aquatic Biology and Toxicology, University of Oslo, P.O. Box 1066 Blindern, 0316 Oslo, Norway
present address: Fakultät für Biologie, University of Duisburg-Essen, Universitätsstr. 5, 45141 Essen, Germany
Stephanie Elferink
Alfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung, Am Handelshafen 12, Bremerhaven 27570, Germany
Daniel Vaulot
UMR7144, CNRS, Sorbonne Université, Station Biologique de Roscoff, Place Georges Teissier, 29682 Roscoff, France
Asian School of the Environment, Nanyang Technological University, 50 Nanyang Avenue, Singapore 639798, Singapore
Alfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung, Am Handelshafen 12, Bremerhaven 27570, Germany
Gunnar Bratbak
Department of Biological Sciences, University of Bergen, P.O. Box 7803, 5020 Bergen, Norway
Aud Larsen
NORCE Norwegian Research Centre, P.O. Box 7810, 5020 Bergen, Norway
Bente Edvardsen
Department of Biosciences, Section for Aquatic Biology and Toxicology, University of Oslo, P.O. Box 1066 Blindern, 0316 Oslo, Norway
Viewed
Total article views: 3,653 (including HTML, PDF, and XML)
Cumulative views and downloads
(calculated since 10 May 2021)
| HTML | XML | Total | BibTeX | EndNote | |
|---|---|---|---|---|---|
| 2,642 | 876 | 135 | 3,653 | 81 | 94 |
- HTML: 2,642
- PDF: 876
- XML: 135
- Total: 3,653
- BibTeX: 81
- EndNote: 94
Total article views: 2,881 (including HTML, PDF, and XML)
Cumulative views and downloads
(calculated since 26 Oct 2021)
| HTML | XML | Total | BibTeX | EndNote | |
|---|---|---|---|---|---|
| 2,253 | 536 | 92 | 2,881 | 75 | 83 |
- HTML: 2,253
- PDF: 536
- XML: 92
- Total: 2,881
- BibTeX: 75
- EndNote: 83
Total article views: 772 (including HTML, PDF, and XML)
Cumulative views and downloads
(calculated since 10 May 2021)
| HTML | XML | Total | BibTeX | EndNote | |
|---|---|---|---|---|---|
| 389 | 340 | 43 | 772 | 6 | 11 |
- HTML: 389
- PDF: 340
- XML: 43
- Total: 772
- BibTeX: 6
- EndNote: 11
Viewed (geographical distribution)
Total article views: 3,653 (including HTML, PDF, and XML)
Thereof 3,430 with geography defined
and 223 with unknown origin.
Total article views: 2,881 (including HTML, PDF, and XML)
Thereof 2,727 with geography defined
and 154 with unknown origin.
Total article views: 772 (including HTML, PDF, and XML)
Thereof 703 with geography defined
and 69 with unknown origin.
| Country | # | Views | % |
|---|
| Country | # | Views | % |
|---|
| Country | # | Views | % |
|---|
| Total: | 0 |
| HTML: | 0 |
| PDF: | 0 |
| XML: | 0 |
- 1
1
| Total: | 0 |
| HTML: | 0 |
| PDF: | 0 |
| XML: | 0 |
- 1
1
| Total: | 0 |
| HTML: | 0 |
| PDF: | 0 |
| XML: | 0 |
- 1
1
Cited
15 citations as recorded by crossref.
- eDNA metabarcoding reveals biodiversity and depth stratification patterns of dinoflagellate assemblages within the epipelagic zone of the western Coral Sea M. Carve et al. 10.1186/s12862-024-02220-7
- Sedimentary ancient DNA: a new paleogenomic tool for reconstructing the history of marine ecosystems N. Nguyen et al. 10.3389/fmars.2023.1185435
- Concepts towards Functional Eukaryotic Microbial Biogeography in the Ocean C. Hoerstmann et al. 10.3390/jmse10111730
- Origin and assembly characteristics of periphyton microbes in subtropical paddy fields: A case study in Tuojia catchment in Southern China Z. Li et al. 10.1016/j.apsoil.2024.105839
- Sea-ice melt determines seasonal phytoplankton dynamics and delimits the habitat of temperate Atlantic taxa as the Arctic Ocean atlantifies E. Oldenburg et al. 10.1093/ismeco/ycae027
- Protistan community structure and the influence of a branch of Kuroshio in the northeastern East China Sea during the late spring Y. Kim et al. 10.3389/fmars.2023.1192529
- Beyond the limits of the unassigned protist microbiome: inferring large-scale spatio-temporal patterns of Syndiniales marine parasites I. Rizos et al. 10.1038/s43705-022-00203-7
- Glacial meltwater and seasonality influence community composition of diazotrophs in Arctic coastal and open waters L. von Friesen et al. 10.1093/femsec/fiad067
- Metabarcoding of microeukaryotes in surface sediments from the Pacific Arctic and adjacent sea areas: The role of diatoms in the biological pump L. Peng et al. 10.1016/j.gloplacha.2023.104262
- Mesoscale oceanographic meanders influence protist community function and structure in the southern Indian Ocean D. Sturm et al. 10.1111/1462-2920.16500
- Short‐ and long‐read metabarcoding of the eukaryotic rRNA operon: Evaluation of primers and comparison to shotgun metagenomics sequencing M. Latz et al. 10.1111/1755-0998.13623
- Spring protistan communities in response to warming in the northeastern East China Sea H. Seo et al. 10.1016/j.marenvres.2024.106376
- Comparing eDNA and eRNA Sampling Methodologies From Pond Environments K. Janik‐Superson et al. 10.1002/aqc.70083
- Pan-Arctic plankton community structure and its global connectivity F. Ibarbalz et al. 10.1525/elementa.2022.00060
- Exploring the diversity of microeukaryotic communities in New England tide pools A. Grow et al. 10.3354/ame02003
15 citations as recorded by crossref.
- eDNA metabarcoding reveals biodiversity and depth stratification patterns of dinoflagellate assemblages within the epipelagic zone of the western Coral Sea M. Carve et al. 10.1186/s12862-024-02220-7
- Sedimentary ancient DNA: a new paleogenomic tool for reconstructing the history of marine ecosystems N. Nguyen et al. 10.3389/fmars.2023.1185435
- Concepts towards Functional Eukaryotic Microbial Biogeography in the Ocean C. Hoerstmann et al. 10.3390/jmse10111730
- Origin and assembly characteristics of periphyton microbes in subtropical paddy fields: A case study in Tuojia catchment in Southern China Z. Li et al. 10.1016/j.apsoil.2024.105839
- Sea-ice melt determines seasonal phytoplankton dynamics and delimits the habitat of temperate Atlantic taxa as the Arctic Ocean atlantifies E. Oldenburg et al. 10.1093/ismeco/ycae027
- Protistan community structure and the influence of a branch of Kuroshio in the northeastern East China Sea during the late spring Y. Kim et al. 10.3389/fmars.2023.1192529
- Beyond the limits of the unassigned protist microbiome: inferring large-scale spatio-temporal patterns of Syndiniales marine parasites I. Rizos et al. 10.1038/s43705-022-00203-7
- Glacial meltwater and seasonality influence community composition of diazotrophs in Arctic coastal and open waters L. von Friesen et al. 10.1093/femsec/fiad067
- Metabarcoding of microeukaryotes in surface sediments from the Pacific Arctic and adjacent sea areas: The role of diatoms in the biological pump L. Peng et al. 10.1016/j.gloplacha.2023.104262
- Mesoscale oceanographic meanders influence protist community function and structure in the southern Indian Ocean D. Sturm et al. 10.1111/1462-2920.16500
- Short‐ and long‐read metabarcoding of the eukaryotic rRNA operon: Evaluation of primers and comparison to shotgun metagenomics sequencing M. Latz et al. 10.1111/1755-0998.13623
- Spring protistan communities in response to warming in the northeastern East China Sea H. Seo et al. 10.1016/j.marenvres.2024.106376
- Comparing eDNA and eRNA Sampling Methodologies From Pond Environments K. Janik‐Superson et al. 10.1002/aqc.70083
- Pan-Arctic plankton community structure and its global connectivity F. Ibarbalz et al. 10.1525/elementa.2022.00060
- Exploring the diversity of microeukaryotic communities in New England tide pools A. Grow et al. 10.3354/ame02003
Latest update: 30 May 2025
Short summary
Here we present a dataset of DNA sequences obtained from size-fractionated seawater samples from the Arctic Ocean that are used to identify taxonomic groups of unicellular plankton. This dataset can be used to investigate the diversity and distribution of plankton groups both by season and by depth and thus increase our understanding of the factors influencing the dynamics of this important part of the Arctic marine ecosystem.
Here we present a dataset of DNA sequences obtained from size-fractionated seawater samples from...
Special issue
Altmetrics
Final-revised paper
Preprint