Standardised soil profile data to support global mapping and modelling (WoSIS snapshot 2019)
- ISRIC – World Soil Information, Wageningen, 6708 PB, the Netherlands
Correspondence: Niels H. Batjes (firstname.lastname@example.org)
The World Soil Information Service (WoSIS) provides quality-assessed and standardised soil profile data to support digital soil mapping and environmental applications at broadscale levels. Since the release of the first “WoSIS snapshot”, in July 2016, many new soil data were shared with us, registered in the ISRIC data repository and subsequently standardised in accordance with the licences specified by the data providers. Soil profile data managed in WoSIS were contributed by a wide range of data providers; therefore, special attention was paid to measures for soil data quality and the standardisation of soil property definitions, soil property values (and units of measurement) and soil analytical method descriptions. We presently consider the following soil chemical properties: organic carbon, total carbon, total carbonate equivalent, total nitrogen, phosphorus (extractable P, total P and P retention), soil pH, cation exchange capacity and electrical conductivity. We also consider the following physical properties: soil texture (sand, silt, and clay), bulk density, coarse fragments and water retention. Both of these sets of properties are grouped according to analytical procedures that are operationally comparable. Further, for each profile we provide the original soil classification (FAO, WRB, USDA), version and horizon designations, insofar as these have been specified in the source databases. Measures for geographical accuracy (i.e. location) of the point data, as well as a first approximation for the uncertainty associated with the operationally defined analytical methods, are presented for possible consideration in digital soil mapping and subsequent earth system modelling. The latest (dynamic) set of quality-assessed and standardised data, called “wosis_latest”, is freely accessible via an OGC-compliant WFS (web feature service). For consistent referencing, we also provide time-specific static “snapshots”. The present snapshot (September 2019) is comprised of 196 498 geo-referenced profiles originating from 173 countries. They represent over 832 000 soil layers (or horizons) and over 5.8 million records. The actual number of observations for each property varies (greatly) between profiles and with depth, generally depending on the objectives of the initial soil sampling programmes. In the coming years, we aim to fill gradually gaps in the geographic distribution and soil property data themselves, this subject to the sharing of a wider selection of soil profile data for so far under-represented areas and properties by our existing and prospective partners. Part of this work is foreseen in conjunction within the Global Soil Information System (GloSIS) being developed by the Global Soil Partnership (GSP). The “WoSIS snapshot – September 2019” is archived and freely accessible at https://doi.org/10.17027/isric-wdcsoils.20190901 (Batjes et al., 2019).
According to a recent review, so far over 800 000 soil profiles have been rescued and compiled into databases over the past few decades (Arrouays et al., 2017). However, only a fraction thereof is readily accessible (i.e. shared) in a consistent format for the greater benefit of the international community. This paper describes procedures for preserving, quality-assessing, standardising and subsequently providing consistent world soil data to the international community, as developed in the framework of the Data or WoSIS (World Soil Information Service) project since the release of the first snapshot in 2016 (Batjes et al., 2017); this collaborative project draws on an increasingly large complement of shared soil profile data. Ultimately, WoSIS aims to provide consistent harmonised soil data, derived from a wide range of legacy holdings as well as from more recently developed soil datasets derived from proximal sensing (e.g. soil spectral libraries; see Terhoeven-Urselmans et al., 2010; Viscarra Rossel et al., 2016), in an interoperable mode and preferably within the setting of a federated, global soil information system (GLOSIS; see GSP-SDF, 2018).
We follow the definition of harmonisation used by the Global Soil Partnership (GSP, Baritz et al., 2014). It encompasses “providing mechanisms for the collation, analysis and exchange of consistent and comparable global soil data and information”. The following domains need to be considered according to GSP's definition: (a) soil description, classification, and mapping; (b) soil analyses; (c) exchange of digital soil data; and (d) interpretations. In view of the breadth and magnitude of the task, as indicated earlier (Batjes et al., 2017), we have restricted ourselves to the standardisation of soil property definitions, soil analytical method descriptions and soil property values (i.e. measurement units). We have expanded the number of soil properties considered in the preceding snapshot, i.e. those listed in the GlobalSoilMap (2015) specifications, gradually working towards the range of soil properties commonly considered in other global soil data compilation programmes (Batjes, 2016; FAO et al., 2012; van Engelen and Dijkshoorn, 2013).
Soil characterisation data, such as pH and bulk density, are collated according to a wide range of analytical procedures. Such data can be more appropriately used when the procedures for their collection, analysis and reporting are well understood. As indicated by USDA Soil Survey Staff (2011), results differ when different analytical methods are used, even though these methods may carry the same name (e.g. soil pH) or concept. This complicates, or sometimes precludes, comparison of one set of data with another if it is not known how both sets were collected and analysed. Hence, our use of “operational definitions” for soil properties that are linked to specific methods. As an example, we may consider the “pH of a soil”. This requires information on sample pretreatment, soil ∕ solution ratio and description of solution (e.g. H2O, 1 M KCl, 0.02 M CaCl2, or 1 M NaF) to be fully understood. The pH level measured in sodium fluoride (pH NaF), for example, provides a measure for the phosphorus (P) retention of a soil, whereas pH measured in water (pH H2O) is an indicator for soil nutrient status. Consequently, in WoSIS, soil properties are defined by the analytical methods and the terminology used, based on common practice in soil science.
This paper discusses methodological changes in the WoSIS workflow since the release of the preceding snapshot (Batjes et al., 2017), describes the data screening procedure, provides a detailed overview of the database content, explains how the new set of standardised data can be accessed and outlines future developments. The data model for the underpinning PostgreSQL database itself is described in a recently updated procedures manual (Ribeiro et al., 2018); these largely technical aspects are considered beyond the scope of this paper.
Quality-assessed data provided through WoSIS can be (and have been) used for various purposes. For example, as point data for making soil property maps at various spatial-scale levels, using digital soil mapping techniques (Arrouays et al., 2017; Guevara et al., 2018; Hengl et al., 2017a, b; Moulatlet et al., 2017). Such property maps, for example, can be used to study global effects of soil and climate on leaf photosynthetic traits and rates (Maire et al., 2015), generate maps of root zone plant-available water capacity (Leenaars et al., 2018) in support of yield gap analyses (van Ittersum et al., 2013), assess impacts of long-term human land use on world soil carbon stocks (Sanderman et al., 2017), or the effects of tillage practices on soil gaseous emissions (Lutz et al., 2019). In turn, this type of information can help to inform global conventions such as the UNCCD (United Nations Convention to Combat Desertification) and UNFCCC (United Nations Framework Convention on Climate Change) so that policymakers and business leaders can make informed decisions about environmental and societal well-being.
The overall workflow for acquiring, ingesting and processing data in WoSIS has been described in an earlier paper (Batjes et al., 2017). To avoid repetition, we will only name the main steps here (Fig. 1). These are, successively, (a) store submitted datasets with their metadata (including the licence defining access rights) in the ISRIC Data Repository; (b) import all datasets “as is” into PostgreSQL; (c) ingest the data into the WoSIS data model, including basic data quality assessment and control; (d) standardise the descriptions for the soil analytical methods and the units of measurement; and (e) ultimately, upon final consistency checks, distribute the quality-assessed and standardised data via WFS (web feature service) and other formats (e.g. TSV for snapshots).
As indicated, datasets shared with our centre are first stored in the ISRIC Data Repository, together with their metadata (currently representing some 452 000 profiles) and the licence and data-sharing agreement in particular, in line with the ISRIC Data Policy (ISRIC, 2016). For the WoSIS standardisation workflow proper, we only consider those datasets (or profiles) that have a “non-restrictive” Creative Commons (CC) licence as well as a defined complement of attributes (see Appendix A). Non-restrictive has been defined here as at least a CC-BY (attribution) or CC-BY-NC (attribution non-commercial) licence. Presently, this corresponds with data for some 196 498 profiles (i.e. profiles that have the right licence and data for at least one of the standard soil properties). Alternatively, some datasets may only be used for digital soil mapping using SoilGrids™, corresponding with an additional 42 000 profiles, corresponding to some 18 % of the total amount of standardised profiles (∼238 000). Although the latter profiles are quality-assessed and standardised following the regular WoSIS workflow, they are not distributed to the international community in accordance with the underpinning licence agreements; as such, their description is beyond the scope of the present paper. Finally, several datasets have licences indicating that they should only be safeguarded in the repository; inherently, these are not being used for any data processing.
3.1 Consistency checks
Soil profile data submitted for consideration in WoSIS were collated according to various national or international standards and presented in various formats (from paper to digital). Further, they are of varying degrees of completeness, as discussed below. Proper documentation of the provenance and identification of each dataset and, ideally, each observation or measurement is necessary to allow for efficient processing of the source data. The following need to be specified: profiles and layers referenced by feature (x–y–z) and time (t), attribute (class, site, layer field and layer lab), method, and value, including units of expression.
To be considered in the actual WoSIS standardisation workflow, each profile must meet several criteria (Table 1). First, we assess if each profile is geo-referenced, has (consistently) defined upper and lower depths for each layer (or horizon), and has data for at least some soil properties (e.g. sand, silt, clay and pH). Having a soil (taxonomic) classification is considered desirable (case 1) but not mandatory (case 2). Georeferenced profiles for which only the classification is specified can still be useful for mapping of soil taxonomic classes (case 3). Alternatively, profiles without any geo-reference may still prove useful to develop pedotransfer functions (case 4 and 5); however, they cannot be served through WFS (because there is no geometry, x,y). The remaining cases (6 and 7) are automatically excluded from the WoSIS workflow. This first broad consistency check led to the exclusion of over 50 000 profiles from the initial complement of soil profiles.
a Such profiles may be used to generate maps of soil taxonomic classes
SoilGrids™ (Hengl et al., 2017b). b Such profiles (geo-referenced solely according
to their country of origin) may be useful for developing pedotransfer functions. Hence, they are standardised, though they are not distributed with the snapshot, as they lack (x,y) coordinates. c Lacking information on the depth of sampling (i.e. layer), the different soil properties cannot be meaningfully grouped to develop pedotransfer functions.
Consistency in layer depth (i.e. sequential increase in the upper and lower depth reported for each layer down the profile) is checked using automated procedures (see Sect. 3.2). In accord with current internationally accepted conventions, such depth increments are given as “measured from the surface, including organic layers and mineral covers” (FAO, 2006; Schoeneberger et al., 2012). Prior to 1993, however, the beginning (zero datum) of the profile was set at the top of the mineral surface (the solum proper), except for “thick” organic layers as defined for peat soils (FAO-ISRIC, 1986; FAO, 1977). Organic horizons were recorded as above and mineral horizons recorded as below, relative to the mineral surface (Schoeneberger et al., 2012, pp. 2–6). Insofar as is possible, such “surficial litter” layers are flagged in WoSIS as an auxiliary variable (see Appendix B) so that they may be filtered out during auxiliary computations of soil organic carbon stocks, for example.
3.2 Flagging duplicate profiles
Several source materials, such as the harmonised WISE soil profile database (Batjes, 2009), the Africa Soil Profile Database (AfSP, Leenaars et al., 2014) and the dataset collated by the International Soil Carbon Network (ISCN, Nave et al., 2017) are compilations of shared soil profile data. These three datasets, for example, contain varying amounts of profiles derived from the National Cooperative Soil Survey database (USDA-NCSS, 2018), an important source of freely shared, primary soil data. The original NCSS profile identifiers, however, may not always have been preserved “as is” in the various data compilations.
To avoid duplication in the WoSIS database, soil profiles located within 100 m of each other are flagged as possible duplicates. Upon additional, semi-automated checks concerning the first three layers (upper and lower depth), i.e. sand, silt and clay content, the duplicates with the least comprehensive component of attribute data are flagged and excluded from further processing. When still in doubt at this stage, additional visual checks are made with respect to other commonly reported soil properties, such as pHwater and organic carbon content. This laborious, yet critical, screening process (see Ribeiro et al., 2018) led to the exclusion of some 50 000 additional profiles from the initial complement of soil profile data.
3.3 Ensuring naming consistency
The next key stage has been the standardisation of soil property names to the WoSIS conventions, as well as the standardisation of the soil analytical methods descriptions themselves (see Appendix A). Quality checks consider the units of measurement, plausible ranges for defined soil properties (e.g. soil pH cannot exceed 14) using checks on minimum, average and maximum values for each source dataset. Data that do not fulfil the requirements are flagged and not considered further in the workflow, unless the observed “inconsistencies” can easily be fixed (e.g. blatant typos in pH values). The whole procedure, with flowcharts and option tables, is documented in the WoSIS Procedures Manual (see Appendices D, E and F in Ribeiro et al., 2018).
Presently, we standardise the following set of soil properties in WoSIS.
Chemical. Organic carbon, total carbon (i.e. organic plus inorganic carbon), total nitrogen, total carbonate equivalent (inorganic carbon), soil pH, cation exchange capacity, electrical conductivity and phosphorus (extractable P, total P and P retention).
Physical. Soil texture (sand, silt and clay), coarse fragments, bulk density and water retention.
It should be noted that all measurement values are reported as recorded in the source data, subsequent to the above consistency checks (and standardisation of the units of measurement to the target units; see Appendix A). As such, we neither apply “gap-filling” procedures in WoSIS, e.g. when only the sand and silt fractions are reported, nor do we apply pedotransfer functions to derive soil hydrological properties. This next stage of data processing is seen as the responsibility of the data users (modellers) themselves, as the required functions or means of depth-aggregating the layer data will vary with the projected use(s) of the standardised data (see Finke, 2006; Hendriks et al., 2016; Van Looy et al., 2017).
3.4 Providing measures for geographic and attribute accuracy
It is well known that “soil observations used for calibration and interpolation are themselves not error free” (Baroni et al., 2017; Cressie and Kornak, 2003; Folberth et al., 2016; Grimm and Behrens, 2010; Guevara et al., 2018; Hengl et al., 2017b; Heuvelink, 2014; Heuvelink and Brown, 2006). Hence, we provide measures for the geographic accuracy of the point locations as well as the accuracy of the laboratory measurements for possible consideration in digital soil mapping and subsequent earth system modelling (Dai et al., 2019).
All profile coordinates in WoSIS are presented according to the World Geodetic System (i.e. WGS84, EPSG code 4326). These coordinates were converted from a diverse range of national projections. Further, the source referencing may have been in decimal degrees (DD) or expressed in degrees, minutes, and seconds (DMS) for both latitude and longitude. The (approximate) accuracy of georeferencing in WoSIS is given in decimal degrees. If the source only provided degrees, minutes, and seconds (DMS) then the geographic accuracy is set at 0.01; if seconds (DM) are missing it is set at 0.1; and if seconds and minutes (D) are missing it is set at 1. For most profiles (86 %; see Table 2), the approximate accuracy of the point locations, as inferred from the original coordinates given in the source datasets, is less than 10 m (total =196 498 profiles; see Sect. 4). Typically, the geo-referencing of soil profiles described and sampled before the advent of GPS (Global Positioning Systems) in the 1970s is less accurate; sometimes we just do not know the “true” accuracy. Digital soil mappers should duly consider the inferred geometric accuracy of the profile locations in their applications (Grimm and Behrens, 2010), since the soil observations and covariates may not actually correspond (Cressie and Kornak, 2003) in both space and time (see Sect. 4, second paragraph).
As indicated, soil data considered in WoSIS have been analysed according to a wide range of analytical procedures and in different laboratories. An indication of the measurement uncertainty is thus desired; soil-laboratory-specific Quality Management Systems (van Reeuwijk, 1998), as well as laboratory proficiency-testing (PT, Magnusson and Örnemark, 2014; Munzert et al., 2007; WEPAL, 2019), can provide this type of information. Yet, calculation of laboratory-specific measurement uncertainty for a single method or multiple analytical methods will require several measurement rounds (years of observation) and solid statistical analyses. Overall, such detailed information is not available for the datasets submitted to the ISRIC data repository. Therefore, out of necessity, we have distilled the desired information from the PT literature (Kalra and Maynard, 1991; Rayment and Lyons, 2011; Rossel and McBratney, 1998; van Reeuwijk, 1983; WEPAL, 2019), in so far as technically feasible. For example, accuracy for bulk density measurements, both for the direct core and the clod method, has been termed “low” (though not quantified) in a recent review (Al-Shammary et al., 2018); using expert knowledge, we have assumed this corresponds with an uncertainty (or variability, expressed as coefficient of variation) of 35 %. Alternatively, for organic carbon content the mean variability was 17 % (with a range of 12 % to 42 %) and for “CEC (cation exchange capacity) buffered at pH 7” it was 18 % (range 13 % to 25 %) when multiple laboratories analyse a standard set of reference materials using similar operational methods (WEPAL, 2019). For soil pH measurements (log scale), we have expressed the uncertainty in terms of “±pH units”.
Importantly, the figures for measurement accuracy presented in Appendix A represent first approximations. They are based on the inter-laboratory comparison of well-homogenised reference samples for a still relatively small range of soil types. These indicative figures should be refined once laboratory-specific and method-related accuracy (i.e. systematic and random error) information is provided for the shared soil data, e.g. by using the procedures described by Eurachem (Magnusson and Örnemark, 2014). Alternatively, this type of information may be refined in the context of international laboratory PT networks, such as GLOSOLAN and WEPAL. Meanwhile, the present “first” estimates may already be considered to calculate the accuracy of digital soil maps and of any interpretations derived from them (e.g. maps of soil organic carbon stocks in support of the UNCCD Land Degradation Neutrality, LDN, effort).
The present snapshot includes standardised data for 196 498 profiles (Fig. 2), about twice the amount represented in the “July 2016” snapshot. These are represented by some 832 000 soil layers (or horizons). In total, this corresponds with over 5.8 million records that include both numeric (e.g. sand content, soil pH and cation exchange capacity) and class (e.g. WRB soil classification and horizon designation) properties. The naming conventions and standard units of measurement are provided in Appendix A, and the file structure is provided in Appendix B.
Being a compilation of national soil data, the profiles were sampled over a long period of time. The dates reported in the snapshot will reflect the year the respective data were sampled and analysed: 1397 (0.7 %) profiles were sampled before 1920, 218 (0.1 %) between 1921 and 1940, 7,657 (3.9 %) between 1941 and 1960, 26,614 (13.5 %) between 1961 and 1980, 62 691 (31.9 %) between 1981 and 2000, and 31 084 (15.8 %) between 2001 and 2020, while the date of sampling is unknown for 66 837 profiles (34.0 %). This information should be taken into consideration when linking the point data with environmental covariates, such as land use, in digital soil mapping.
The number of profiles per continent is highest for North America (73 604 versus 63 066 in the “2016” snapshot), followed by Oceania (42 918 versus 235), Europe (35 311 versus 1,908), Africa (27 688 versus 17 153), South America (10 218 versus 8790), Asia (6704 versus 3089) and Antarctica (9, no change). These profiles come from 173 countries; the average density of observations is 1.35 profiles per 1000 km2. The actual density of observations varies greatly, both between countries (Appendix C) and within each country, with the largest densities of “shared” profiles reported for Belgium (228 profiles per 1000 km2) and Switzerland (265 profiles per 1000 km2). There are still relatively few profiles for Central Asia, Southeast Asia, Central and Eastern Europe, Russia, and the northern circumpolar region. The number of profiles by biome (R. J. Olson et al., 2001) or broad climatic region (Sayre et al., 2014), as derived from GIS overlays, is provided in Appendix D for additional information.
There are more observations for the chemical data than the physical data (see Appendix A) and the number of observations generally decreases with depth, largely depending on the objectives of the original soil surveys. The interquartile range for maximum depth of soil sampled in the field is 56–152 cm, with a median of 110 cm (mean =117 cm). In this respect, it should be noted that some specific purpose surveys only considered the topsoil (e.g. soil fertility surveys), while others systematically sampled soil layers up to depths exceeding 20 m.
Present gaps in the geographic distribution (Appendices C and D) and range of soil attribute data (Appendix A) will gradually be filled in the coming years, though this largely depends on the willingness or ability of data providers to share (some of) their data for consideration in WoSIS. For the northern boreal and Arctic region, for example, ISRIC will regularly ingest new profile data collated by the International Soil Carbon Network (ISCN, Malhotra et al., 2019). Alternatively, it should be reiterated that for some regions, such as Europe (e.g. EU LUCAS topsoil database; see Tóth et al., 2013) and the state of Victoria (Australia), there are holdings in the ISRIC repository that may only be used and standardised for SoilGrids™ applications due to licence restrictions. Consequently, the corresponding profiles (∼42 000) are neither shown in Fig. 2 nor are considered in the descriptive statistics in Appendix C.
Upon their standardisation, the data are distributed through ISRIC's SDI (Spatial Data Infrastructure). This web platform is based on open-source technologies and open web-services (WFS, WMS, WCS, CSW) following Open Geospatial Consortium (OGC) standards and is aimed specifically at handling soil data; our metadata are organised following standards of the International Organization for Standardization (ISO-28258, 2013) and are INSPIRE (2015) compliant. The three main components of the SDI are PostgreSQL + PostGIS, GeoServer and GeoNetwork. Visualisation and data download are done in GeoNetwork with resources from GeoServer (https://data.isric.org, last access: 12 September 2019). The third component is the PostgreSQL database, with the spatial extension PostGIS, in which WoSIS resides; the database is connected to GeoServer to permit data download from GeoNetwork. These processes are aimed at facilitating global data interoperability and citeability in compliance with FAIR principles: the data should be “findable, accessible, interoperable and reusable” (Wilkinson et al., 2016). With partners, steps are being taken towards the development of a federated and ultimately interoperable spatial soil data infrastructure (GLOSIS) through which source data are served and updated by the respective data providers and made queryable according to a common SoilML standard (OGC, 2019).
The procedure for accessing the most current set of standardised soil profile data (“wosis_latest”), either from R or QGIS using WFS, is explained in a detailed tutorial (Rossiter, 2019). This dataset is dynamic; hence, it will grow when new point data are shared and processed, additional soil attributes are considered in the WoSIS workflow, and/or when possible corrections are required. Potential errors may be reported online via a “Google group” so that they may be addressed in the dynamic version (register via: https://groups.google.com/forum/#!forum/isric-world-soil-informationlast access: 15 January 2020).
For consistent citation purposes, we provide static snapshots of the standardised data, in a tab-separated values format, with unique DOI's (digital object identifier); as indicated, this paper describes the second WoSIS snapshot.
The above procedures describe standardisation according to operational definitions for soil properties. Importantly, it should be stressed here that the ultimate, desired full harmonisation to an agreed reference method y, for example, “pH H2O, 1:2.5 soil ∕ water solution” for all “pH 1:x H2O” measurements, will first become feasible once the target method (y) for each property has been defined and subsequently accepted by the international soil community. A next step would be to collate and develop “comparative” datasets for each soil property, i.e. sets with samples analysed according to a given reference method (Yi) and the corresponding national methods (Xj) for pedotransfer function development. In practice, however, such relationships will often be soil type and region specific (see Appendix C in GlobalSoilMap, 2015). Alternatively, according to GLOSOLAN (Suvannang et al., 2018, p. 10) “comparable and useful soil information (at the global level) will only be attainable once laboratories agree to follow common standards and norms”. In such a collaborative process, it will be essential to consider the end user's requirements in terms of quality and applicability of the data for their specific purposes (i.e. fitness for intended use). Over the years, many organisations have individually developed and implemented analytical methods and quality assurance systems that are well suited for their countries (e.g. Soil Survey Staff, 2014a) or regions (Orgiazzi et al., 2018) and thus, pragmatically, may not be inclined to implement the anticipated GLOSOLAN standard analytical methods.
Snapshot “WoSIS_2019_September” is archived for long-term storage at ISRIC – World Soil Information, the World Data Centre for Soils (WDC-Soils) of the ISC (International Council for Science, formerly ICSU) World Data System (WDS). It is freely accessible at https://doi.org/10.17027/isric-wdcsoils.20190901 (Batjes et al., 2019). The zip file (154 Mb) includes a “readme first” file that describes key aspects of the dataset (see also Appendix B) with reference to the WoSIS Procedures Manual (Ribeiro et al., 2018), and the data itself in TSV format (1.8 Gb, decompressed) and GeoPackage format (2.2 Gb decompressed).
The second WoSIS snapshot provides consistent, standardised data for some 196 000 profiles worldwide. However, as described, there are still important gaps in terms of geographic distribution as well as the range of soil taxonomic units and/or properties represented. These issues will be addressed in future releases, depending largely on the success of our targeted requests and searches for new data providers and/or partners worldwide.
We will increasingly consider data derived by soil spectroscopy and emerging innovative methods. Further, long-term time series at defined locations will be sought to support space–time modelling of soil properties, such as changes in soil carbon stocks or soil salinity.
We provide measures for geographic accuracy of the point data, as well as a first approximation for the uncertainty associated with the operationally defined analytical methods. This information may be used to assess uncertainty in digital soil mapping and earth system modelling efforts that draw on the present set of point data.
Capacity building and cooperation among (inter)national soil institutes will be necessary to create and share ownership of the soil information newly derived from the shared data and to strengthen the necessary expertise and capacity to further develop and test the world soil information service worldwide. Such activities may be envisaged within the broader framework of the Global Soil Partnership and emerging GLOSIS system.
a Inferred accuracy (or uncertainty), rounded to the nearest 5 %, unless otherwise indicated (i.e. units for soil pH), as derived from the following sources: Al-Shammary et al. (2018), Kalra and Maynard (1991), Rayment and Lyons (2011), Rossel and McBratney (1998), van Reeuwijk (1983), WEPAL (2019). These figures are first approximations that will be fine-tuned once more specific results of laboratory proficiency tests, from national Soil Quality Management systems, become available. b Generally, the fine-earth fraction is defined as being <2 mm. Alternatively, an upper limit of 1 mm was used in the former Soviet Union and its satellite states (Katchynsky scheme). This has been indicated in the file “wosis_201907_layers_chemical.tsv” and “wosis_201907_layer_physicals.tsv” for those soil properties where this differentiation is important (see “sample pretreatment” in string “xxxx_method” in Appendix B). c Provided only when the sum of clay, silt and sand fraction is ≥90 % and ≤100 %. d Where available, the “cleaned” (original) layer and horizon designation is provided for general information; these codes have not been standardised as they vary widely between different classification systems (Bridges, 1993; Gerasimova et al., 2013). When horizon designations are not provided in the source databases, we have flagged all layers with an upper depth given as being negative (e.g. −10 to 0 cm under pre-1993 conventions; see text and the WoSIS Procedures Manual 2018; Ribeiro et al., 2018, p. 24, footnote 9) in the source databases as likely being “litter” layers. n/a – not applicable
This Appendix describes the structure of the data files presented in the “September 2019” WoSIS snapshot:
wosis_201909_attributes.tsv. This file lists the four to six letter codes for each attribute, whether the attribute is a site or horizon property, the unit of measurement, the number of profiles and layers represented in the snapshot, and a brief description of each attribute, as well as the inferred uncertainty for each property (Appendix A).
wosis_201909_profiles.tsv. This file contains the unique profile ID (i.e. primary key), the source of the data, country ISO code and name, accuracy of geographical coordinates, latitude and longitude (WGS 1984), point geometry of the location of the profile, and the maximum depth of soil described and sampled, as well as information on the soil classification system and edition (Table B1). Depending on the soil classification system used, the number of fields will vary. For example, for the World Soil Reference Base (WRB) system these are as follows: publication_year (i.e. version), reference_soil_group_code, reference_soil_group_name, and the name(s) of the prefix (primary) qualifier(s) and suffix (supplementary) qualifier(s). The terms principal qualifier and supplementary qualifier are currently used (IUSS Working Group WRB, 2015); earlier WRB versions used prefix and suffix for this (e.g. IUSS Working Group WRB, 2006). Alternatively, for USDA Soil Taxonomy, the version (year), order, suborder, great group and subgroup can be accommodated (Soil Survey Staff, 2014b). Inherently, the number of records filled will vary between (and within) the various source databases.
wosis_201909_layer_chemical.tsv and wosis_201909_layer_physical.tsv. Data for the various layers (or horizons) are presented in two separate files in view of their size (i.e. one for the chemical and one for the physical soil properties). The file structure is described in Table B1.
∗ Name of attribute (“xxxx”) as defined under “code” in file wosis_201909_attributes.tsv.
Format. All fields in the above files are delimited by tab, with double quotation marks as text delimiters. File coding is according to the UTF-8 unicode transformation format.
Using the data. The above TSV files can easily be imported into an SQL database or statistical software such as R, after which they may be joined using the unique profile_id. Guidelines for handling and querying the data are provided in the WoSIS Procedures Manual (Ribeiro et al., 2018, pp. 45–48); see also the detailed tutorial by Rossiter (2019).
* Disputed territories. Country names and areas are based on the Global Administrative Layers (GAUL) database; see http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691 (last access: 8 January 2020).
NB led the DATA (WoSIS) project and wrote the body of the paper. ER provided special expertise on database management and AO on soil analytical methods. All co-authors contributed to the writing and revision of this paper.
The authors declare that they have no conflict of interest.
The development of WoSIS has been made possible thanks to the contributions and shared knowledge of a steadily growing number of data providers, including soil survey organisations, research institutes and individual experts, for which we are grateful; for an overview, please see https://www.isric.org/explore/wosis/wosis-contributing-institutions-and-experts (last access: 8 January 2020). We thank our colleagues Laura Poggio, Luis de Sousa and Bas Kempen for their constructive comments on a “pre-release” of the snapshot data. Further, the manuscript benefitted from the constructive comments provided by the two reviewers.
ISRIC – World Soil Information, legally registered as the International Soil Reference and Information Centre, receives core funding from the Dutch Government.
This paper was edited by David Carlson and reviewed by Alessandro Samuel-Rosa and one anonymous referee.
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