Preprints
https://doi.org/10.5194/essd-2026-512
https://doi.org/10.5194/essd-2026-512
09 Sep 2026
 | 09 Sep 2026
Status: this preprint is currently under review for the journal ESSD.

The ABRACOS dataset: a multidisciplinary marine ecosystem baseline for the western tropical Atlantic (2015–2017)

Arnaud Bertrand, Monique Simier, Gabriel Vinicius Felix Afonso, Gael Alory, Alejandro Ariza, Ramilla Assunção, Jean-Christophe Auguet, François Baurand, Beatrice Bec, Delphine Bonnet, Léandro Ferreira Cabanez, Claire Carré, Alexis Chaigneau, Adilma de Lourdes Montenegro Cocentino, Isis Amalia Cordeiro, Alex Costa da Silva, Martin Coubard, Mauro de Melo Junior, Juan-Carlos Molinero, Jeremy Devesa, Gilles Domalain, Leandro Nole Eduardo, Gérard Eldin, Gabriel Bittencourt Farias, Guilherme Ferreira, Gabriela Guerra Araújo Abrantes Figueiredo, Thierry Frédou, Diaz Xiomara Garcia, Everton Giachini Tosetto, Júlio Guazzelli Gonzalez, Jacques Grelet, Sandrine Hillion, Anne Justino, Marina Cavalcanti Jales, Sírleis Rodrigues Lacerda, François Le Loc'h, Anne Lebourges-Dhaussy, Rayssa Siqueira Lima, Nathalia Lins-Silva, Alex Souza Lira, Simone Maria de Albuquerque Lira, Catarina Marcolin da Rocha, Júlia Rodrigues Martins, Anais Médieu, Catarina Melo, Pedro Augusto Mendes de Castro Melo, Michael Maia Mincarone, Magali Monnier, Jean-Marie Munaron, Sigrid Neumann-Leitão, Junior Miodeli Nogueira, Matheus Oliveira, Beatrice Padovani Ferreira, Latifa Pelage, David Point, Ulisses Pinheiro, Fabrice Roubaud, Gildas Roudaut, Pierre Rousselot, Julianna de Lemos Santana, Ralf Schwamborn, Maria da Glória Gonçalves Silva-Cunha, Andrey Soares, Jesser Fidelis Souza Filho, Jean-François Ternon, Paulo Travassos, Gary Vargas, Teodoro Vaske Jr., Renata P. S. Campelo, Bárbara Teixeira Villarins, and Flávia Lucena-Frédou

Abstract. The western tropical Atlantic off Northeast Brazil is a dynamically complex region where major current systems contribute to interhemispheric exchanges, yet it remains one of the least observed ocean areas in terms of integrated, depth-resolved, and ecosystem-wide measurements. The two ABRACOS (Acoustics along the BRAzilian COaSt) surveys, conducted during austral spring 2015 (ABRACOS 1) and austral autumn 2017 (ABRACOS 2) aboard the R/V ANTEA, were designed to address this gap through coordinated multidisciplinary observations spanning the continental shelf, slope, seamounts, and open ocean along the Fernando de Noronha Ridge. Although each survey represents a synoptic seasonal snapshot, hydrographic and current observations from both campaigns have been shown to be representative of canonical spring and autumn conditions in the region.

The dataset combines continuous underway measurements — thermosalinograph, ship-mounted ADCP, multifrequency active acoustics (38, 70, 120, and 200 kHz), and meteorological data — with station-based physical, biogeochemical, and biological sampling at 117 oceanographic stations. Station-based observations include 96 CTD-O₂ profiles, 881 discrete rosette bottle samples (salinity, dissolved oxygen, nutrients, pigments, cytometry, and phytoplankton abundance), 266 plankton net deployments, and 116 trawl operations targeting demersal and deep-pelagic communities from 10 to 1,100 m depth. Biological sampling yielded 172,241 taxonomically identified specimens representing 1,532 taxa across planktonic, nektonic, and demersal compartments. The dataset is further complemented by 3,466 stable isotope measurements (δ¹³C and δ¹⁵N) across particulate organic matter, zooplankton, and demersal and deep-pelagic organisms, as well as mercury concentrations and microplastic occurrence data for 194 and 381 individuals, respectively, collected during ABRACOS 2.

All datasets are quality-controlled, harmonised across surveys using consistent station identifiers and taxonomic referencing against WoRMS and Eschmeyer's Catalog, and publicly archived in the SEANOE repository under dedicated DOIs. Having already supported more than 80 peer-reviewed publications across nine thematic domains — from physical oceanography and taxonomy to trophic ecology, anthropogenic contamination, and ecosystem connectivity — the ABRACOS dataset constitutes a unique multi-trophic, multi-compartment, and multi-contaminant baseline for the western tropical Atlantic, designed to support comparative analyses, ecosystem modelling, and synthesis efforts at regional to global scales.

The datasets described in this paper are publicly available through SEANOE (https://www.seanoe.org).

Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. While Copernicus Publications makes every effort to include appropriate place names, the final responsibility lies with the authors. Views expressed in the text are those of the authors and do not necessarily reflect the views of the publisher.
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Arnaud Bertrand, Monique Simier, Gabriel Vinicius Felix Afonso, Gael Alory, Alejandro Ariza, Ramilla Assunção, Jean-Christophe Auguet, François Baurand, Beatrice Bec, Delphine Bonnet, Léandro Ferreira Cabanez, Claire Carré, Alexis Chaigneau, Adilma de Lourdes Montenegro Cocentino, Isis Amalia Cordeiro, Alex Costa da Silva, Martin Coubard, Mauro de Melo Junior, Juan-Carlos Molinero, Jeremy Devesa, Gilles Domalain, Leandro Nole Eduardo, Gérard Eldin, Gabriel Bittencourt Farias, Guilherme Ferreira, Gabriela Guerra Araújo Abrantes Figueiredo, Thierry Frédou, Diaz Xiomara Garcia, Everton Giachini Tosetto, Júlio Guazzelli Gonzalez, Jacques Grelet, Sandrine Hillion, Anne Justino, Marina Cavalcanti Jales, Sírleis Rodrigues Lacerda, François Le Loc'h, Anne Lebourges-Dhaussy, Rayssa Siqueira Lima, Nathalia Lins-Silva, Alex Souza Lira, Simone Maria de Albuquerque Lira, Catarina Marcolin da Rocha, Júlia Rodrigues Martins, Anais Médieu, Catarina Melo, Pedro Augusto Mendes de Castro Melo, Michael Maia Mincarone, Magali Monnier, Jean-Marie Munaron, Sigrid Neumann-Leitão, Junior Miodeli Nogueira, Matheus Oliveira, Beatrice Padovani Ferreira, Latifa Pelage, David Point, Ulisses Pinheiro, Fabrice Roubaud, Gildas Roudaut, Pierre Rousselot, Julianna de Lemos Santana, Ralf Schwamborn, Maria da Glória Gonçalves Silva-Cunha, Andrey Soares, Jesser Fidelis Souza Filho, Jean-François Ternon, Paulo Travassos, Gary Vargas, Teodoro Vaske Jr., Renata P. S. Campelo, Bárbara Teixeira Villarins, and Flávia Lucena-Frédou

Status: open (until 16 Oct 2026)

Comment types: AC – author | RC – referee | CC – community | EC – editor | CEC – chief editor | : Report abuse
Arnaud Bertrand, Monique Simier, Gabriel Vinicius Felix Afonso, Gael Alory, Alejandro Ariza, Ramilla Assunção, Jean-Christophe Auguet, François Baurand, Beatrice Bec, Delphine Bonnet, Léandro Ferreira Cabanez, Claire Carré, Alexis Chaigneau, Adilma de Lourdes Montenegro Cocentino, Isis Amalia Cordeiro, Alex Costa da Silva, Martin Coubard, Mauro de Melo Junior, Juan-Carlos Molinero, Jeremy Devesa, Gilles Domalain, Leandro Nole Eduardo, Gérard Eldin, Gabriel Bittencourt Farias, Guilherme Ferreira, Gabriela Guerra Araújo Abrantes Figueiredo, Thierry Frédou, Diaz Xiomara Garcia, Everton Giachini Tosetto, Júlio Guazzelli Gonzalez, Jacques Grelet, Sandrine Hillion, Anne Justino, Marina Cavalcanti Jales, Sírleis Rodrigues Lacerda, François Le Loc'h, Anne Lebourges-Dhaussy, Rayssa Siqueira Lima, Nathalia Lins-Silva, Alex Souza Lira, Simone Maria de Albuquerque Lira, Catarina Marcolin da Rocha, Júlia Rodrigues Martins, Anais Médieu, Catarina Melo, Pedro Augusto Mendes de Castro Melo, Michael Maia Mincarone, Magali Monnier, Jean-Marie Munaron, Sigrid Neumann-Leitão, Junior Miodeli Nogueira, Matheus Oliveira, Beatrice Padovani Ferreira, Latifa Pelage, David Point, Ulisses Pinheiro, Fabrice Roubaud, Gildas Roudaut, Pierre Rousselot, Julianna de Lemos Santana, Ralf Schwamborn, Maria da Glória Gonçalves Silva-Cunha, Andrey Soares, Jesser Fidelis Souza Filho, Jean-François Ternon, Paulo Travassos, Gary Vargas, Teodoro Vaske Jr., Renata P. S. Campelo, Bárbara Teixeira Villarins, and Flávia Lucena-Frédou

Data sets

ABRACOS cruise, Antea R/V A. Bertrand https://doi.org/10.17600/15005600

ABRACOS 2 cruise, Antea R/V A. Bertrand https://doi.org/10.17600/17004100

Nano- and Microphytoplankton diversity data collected during the ABRACOS 1 and 2 surveys performed along the Northeast Brazil continental shelf, slope and open ocean C. Carré et al. https://doi.org/10.17882/98867

Mercury concentration measurements performed on micronekton organisms collected during the ABRACOS 2 survey in the Tropical Western Atlantic (3°S–6°S) L. N. Eduardo et al. https://doi.org/10.17882/118084

Dataset of demersal and deep-pelagic macroalgae, invertebrates and fishes collected during the ABRACOS expeditions in the Tropical Western Atlantic L. N. Eduardo et al. https://doi.org/10.17882/107231

Nutrient data collected during the ABRACOS 1 and 2 surveys performed along the northeast Brazilian continental shelf, slope and open ocean G. B. Farias et al. https://doi.org/10.17882/95172

Phytoplankton pigment data collected during the ABRACOS 1 and 2 surveys performed along the northeast Brazilian continental shelf, slope and open ocean G. B. Farias et al. https://doi.org/10.17882/95171

ABRACOS 1 cruise. Acoustic data A. Bertrand et al. https://doi.org/10.17882/77035

ABRACOS 2 cruise. Acoustic data A. Bertrand et al. https://doi.org/10.17882/91135

ABRACOS 1 cruise - Physical datasets A. Bertrand et al. https://doi.org/10.17882/76696

ABRACOS 2 cruise - Physical datasets A. Bertrand et al. https://doi.org/10.17882/76352

Microplastics analysis performed on micronekton organisms collected during the ABRACOS 2 survey in the Tropical Western Atlantic (3°S–9°S) G. Ferreira et al. https://doi.org/10.17882/118089

Isotopic analyses realized on samples of Particular Organic Matter, Zooplankton, and demersal and deep-pelagic invertebrates and fishes collected during the ABRACOS expeditions in the Tropical Western Atlantic G. G. A. A. Figueiredo et al. https://doi.org/10.17882/108735

Abundance data of planktonic cnidarians collected during the ABRACOS 1 and 2 surveys performed along the northeast Brazilian continental shelf, slope and open ocean E. Giachini Tosetto et al. https://doi.org/10.17882/92011

Abundance data of large microzooplankton collected during the ABRACOS 1 and 2 surveys performed along the northeast Brazilian continental shelf, slope and open ocean E. Tosetto et al. https://doi.org/10.17882/98869

Abundance and biovolume of Zooplankton collected during the ABRACOS expeditions in the Tropical Western Atlantic P. A. M. D. C. Melo et al. https://doi.org/10.17882/109464

Arnaud Bertrand, Monique Simier, Gabriel Vinicius Felix Afonso, Gael Alory, Alejandro Ariza, Ramilla Assunção, Jean-Christophe Auguet, François Baurand, Beatrice Bec, Delphine Bonnet, Léandro Ferreira Cabanez, Claire Carré, Alexis Chaigneau, Adilma de Lourdes Montenegro Cocentino, Isis Amalia Cordeiro, Alex Costa da Silva, Martin Coubard, Mauro de Melo Junior, Juan-Carlos Molinero, Jeremy Devesa, Gilles Domalain, Leandro Nole Eduardo, Gérard Eldin, Gabriel Bittencourt Farias, Guilherme Ferreira, Gabriela Guerra Araújo Abrantes Figueiredo, Thierry Frédou, Diaz Xiomara Garcia, Everton Giachini Tosetto, Júlio Guazzelli Gonzalez, Jacques Grelet, Sandrine Hillion, Anne Justino, Marina Cavalcanti Jales, Sírleis Rodrigues Lacerda, François Le Loc'h, Anne Lebourges-Dhaussy, Rayssa Siqueira Lima, Nathalia Lins-Silva, Alex Souza Lira, Simone Maria de Albuquerque Lira, Catarina Marcolin da Rocha, Júlia Rodrigues Martins, Anais Médieu, Catarina Melo, Pedro Augusto Mendes de Castro Melo, Michael Maia Mincarone, Magali Monnier, Jean-Marie Munaron, Sigrid Neumann-Leitão, Junior Miodeli Nogueira, Matheus Oliveira, Beatrice Padovani Ferreira, Latifa Pelage, David Point, Ulisses Pinheiro, Fabrice Roubaud, Gildas Roudaut, Pierre Rousselot, Julianna de Lemos Santana, Ralf Schwamborn, Maria da Glória Gonçalves Silva-Cunha, Andrey Soares, Jesser Fidelis Souza Filho, Jean-François Ternon, Paulo Travassos, Gary Vargas, Teodoro Vaske Jr., Renata P. S. Campelo, Bárbara Teixeira Villarins, and Flávia Lucena-Frédou
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Latest update: 09 Sep 2026
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Short summary
Understanding marine ecosystems requires observing environment, organisms, and interactions. Off Northeast Brazil, we conducted expeditions in 2015 and 2017 to measure ocean conditions, map distributions with acoustics, and sample from plankton to deep-sea fish. We identified 172,000 specimens, analysed food webs using chemical tracers, and measured contaminants. This dataset connects ocean physics to biodiversity across depths, providing an integrated view of a tropical marine ecosystem.
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