the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Reference maps of soil phosphorus for the pan-Amazon region
Joao Paulo Darela-Filho
Anja Rammig
Katrin Fleischer
Tatiana Reichert
Laynara F. Lugli
Carlos Alberto Quesada
Luis Carlos Colocho Hurtarte
Mateus Dantas de Paula
David M. Lapola
Abstract. Phosphorus (P) is recognized as an important driver of terrestrial primary productivity across biomes. Several recent developments in process-based vegetation models aim at the concomitant representation of the carbon (C), nitrogen (N) and P cycles in terrestrial ecosystems, building upon the ecological stoichiometry and the processes that govern nutrient availability in soils. Thus, understanding the spatial distribution of P forms in soil is fundamental to initialize and/or evaluate process-based models that include the biogeochemical cycle of P. One of the major constraints for the large-scale application of these models is the lack of data related to the spatial patterns of the various forms of P present in soils, given the sparse nature of in situ observations. We applied a model selection approach based on random forest regressions models trained and tested for the prediction of different P forms (total, available, organic, and inorganic P) – obtained by the Hedley sequential extraction method. As input for the models, reference soil group and textural properties, geolocation, N and C contents, terrain elevation and slope, soil pH and mean annual precipitation and temperature from 108 sites of the RAINFOR network were used. The selected models were then applied to predict the target P forms using several spatially explicit datasets containing contiguous estimated values across the area of interest. Here, we present a set of maps depicting the distribution of total, available, organic, and inorganic P forms in the topsoil profile (0–30 cm) of the pan-Amazon region in the spatial resolution of 0.5 x 0.5 degrees. The random forest regression models presented a good level of mean accuracy for the total, available, organic, and inorganic P forms (77.37 %, 76,86 %, 75.14 %, and 68.23 % respectively). Our results confirm that the mapped area have generally very low total P concentration status with a clear gradient of soil development and nutrient content. Total N was the most important variable for the prediction of all target P forms and the analysis of partial dependence indicates several features that are also related with soil concentration of all target P forms. We observed that gaps in the data used to train and test the random forest models, especially in the most elevated areas, constitute a problem to the methods applied here. However, most of the area could be mapped with a good level of accuracy. Also, the biases of gridded data used for model prediction are introduced in the P maps. Nonetheless, the final map of total P resembles the expected geographical patterns. Our maps may be useful for the parametrization and evaluation of process-based terrestrial ecosystem models as well as other types of models. Also, they can promote the testing of new hypothesis about the gradient and status of P availability and soil-vegetation feedbacks in the pan-Amazon region.
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Joao Paulo Darela-Filho et al.
Status: open (until 15 Oct 2023)
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RC1: 'Comment on essd-2023-272', Anonymous Referee #1, 28 Sep 2023
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This manuscript employs Random Forests to map spatial patterns of various forms of phosphorus (P) within the topsoil profile (0 - 30 cm) across the pan-Amazon region at a resolution of 0.5 x 0.5 degrees. Leveraging a dataset of 108 soil P observations, the authors have generated comprehensive maps depicting the distribution of total, available, organic, and inorganic P forms in the topsoil. The results demonstrate commendable accuracy in estimating these various P forms. The manuscript is generally well-crafted with clearly defined objectives, and the study presents several merits. However, there are some methodological aspects lacking clarity and justification, along with a few minor concerns.
The main shortcomings of this study include:
Resolution Rationale: The manuscript lacks a clear justification for selecting a 0.5-degree resolution for mapping. Providing insight into the reasoning behind this choice would enhance the manuscript's robustness.
Methodological Explanation: Certain methodological aspects, such as the approach to Random Forests model selection and the use of 105 Random Forests models for 108 observations, require more detailed explanation and justification. The reason for excluding primary mineral P and the occluded P forms were not solid.
Temporal Representativeness: The temporal scope of the soil P estimates needs to be clarified and discussed. It would be beneficial to address the use of data collected at different periods and its potential impact on the results, especially in the context of changing soil conditions.
Additionally, the manuscript could be strengthened by:
High-Resolution Covariate Exploration: Given that many relevant soil P covariates are available at finer spatial grids, discussing the potential benefits of reproducing this study with higher spatial resolution information would enhance the value of the presented soil P data.
Sensitivity to Spatial Support: An exploration of how soil P predictions might vary with different spatial support levels would provide valuable insights into the robustness of the results.
Finally, on a minor note, it's important to consistently capitalize "Random Forests" throughout the manuscript, as it is the name of the algorithm.
Citation: https://doi.org/10.5194/essd-2023-272-RC1
Joao Paulo Darela-Filho et al.
Data sets
Reference maps of soil phosphorus for the pan-Amazon region: code and data Joao Paulo Darela-Filho and David Montenegro Lapola https://doi.org/10.25824/redu/FROESE
Joao Paulo Darela-Filho et al.
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