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  <front>
    <journal-meta><journal-id journal-id-type="publisher">ESSD</journal-id><journal-title-group>
    <journal-title>Earth System Science Data</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ESSD</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Earth Syst. Sci. Data</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1866-3516</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/essd-14-5737-2022</article-id><title-group><article-title>A compilation of global bio-optical in situ data for ocean colour satellite
applications – version three</article-title><alt-title>A compilation of global bio-optical in situ data</alt-title>
      </title-group><?xmltex \runningtitle{A compilation of global bio-optical in situ data}?><?xmltex \runningauthor{A. Valente et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff56">
          <name><surname>Valente</surname><given-names>André</given-names></name>
          <email>adovalente@fc.ul.pt</email>
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Sathyendranath</surname><given-names>Shubha</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Brotas</surname><given-names>Vanda</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-8612-4167</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Groom</surname><given-names>Steve</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2 aff3">
          <name><surname>Grant</surname><given-names>Michael</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Jackson</surname><given-names>Thomas</given-names></name>
          
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        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Chuprin</surname><given-names>Andrei</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Taberner</surname><given-names>Malcolm</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Airs</surname><given-names>Ruth</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4 aff5">
          <name><surname>Antoine</surname><given-names>David</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>Arnone</surname><given-names>Robert</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff7">
          <name><surname>Balch</surname><given-names>William M.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff8 aff9 aff10">
          <name><surname>Barker</surname><given-names>Kathryn</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff11">
          <name><surname>Barlow</surname><given-names>Ray</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff12">
          <name><surname>Bélanger</surname><given-names>Simon</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff13">
          <name><surname>Berthon</surname><given-names>Jean-François</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff14">
          <name><surname>Beşiktepe</surname><given-names>Şükrü</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9615-4746</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff15">
          <name><surname>Borsheim</surname><given-names>Yngve</given-names></name>
          
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          <name><surname>Bracher</surname><given-names>Astrid</given-names></name>
          
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          <name><surname>Brando</surname><given-names>Vittorio</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-2193-5695</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2 aff46">
          <name><surname>Brewin</surname><given-names>Robert J. W.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff13">
          <name><surname>Canuti</surname><given-names>Elisabetta</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff19">
          <name><surname>Chavez</surname><given-names>Francisco P.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff20">
          <name><surname>Cianca</surname><given-names>Andrés</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2108-0540</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Claustre</surname><given-names>Hervé</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-6243-0258</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff9">
          <name><surname>Clementson</surname><given-names>Lesley</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-4415-993X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff21">
          <name><surname>Crout</surname><given-names>Richard</given-names></name>
          
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        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Ferreira</surname><given-names>Afonso</given-names></name>
          
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        <contrib contrib-type="author" corresp="no" rid="aff26 aff47">
          <name><surname>Freeman</surname><given-names>Scott</given-names></name>
          
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        <contrib contrib-type="author" corresp="no" rid="aff22">
          <name><surname>Frouin</surname><given-names>Robert</given-names></name>
          
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        <contrib contrib-type="author" corresp="no" rid="aff23 aff24">
          <name><surname>García-Soto</surname><given-names>Carlos</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff25">
          <name><surname>Gibb</surname><given-names>Stuart W.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff22">
          <name><surname>Goericke</surname><given-names>Ralf</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff21">
          <name><surname>Gould</surname><given-names>Richard</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff48">
          <name><surname>Guillocheau</surname><given-names>Nathalie</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff26">
          <name><surname>Hooker</surname><given-names>Stanford B.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff49">
          <name><surname>Hu</surname><given-names>Chuamin</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3949-6560</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff22">
          <name><surname>Kahru</surname><given-names>Mati</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff27">
          <name><surname>Kampel</surname><given-names>Milton</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff28">
          <name><surname>Klein</surname><given-names>Holger</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff29">
          <name><surname>Kratzer</surname><given-names>Susanne</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff30">
          <name><surname>Kudela</surname><given-names>Raphael</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-8640-1205</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff31">
          <name><surname>Ledesma</surname><given-names>Jesus</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff50">
          <name><surname>Lohrenz</surname><given-names>Steven</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3811-2975</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff32">
          <name><surname>Loisel</surname><given-names>Hubert</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff26">
          <name><surname>Mannino</surname><given-names>Antonio</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Martinez-Vicente</surname><given-names>Victor</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3492-583X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff7">
          <name><surname>Matrai</surname><given-names>Patricia</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-1656-5519</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff33">
          <name><surname>McKee</surname><given-names>David</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff22">
          <name><surname>Mitchell</surname><given-names>Brian G.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-8550-4333</ext-link></contrib>
        <contrib contrib-type="author" deceased="yes" corresp="no" rid="aff34">
          <name><surname>Moisan</surname><given-names>Tiffany</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff51 aff55">
          <name><surname>Montes</surname><given-names>Enrique</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff35">
          <name><surname>Muller-Karger</surname><given-names>Frank</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3159-5011</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff26">
          <name><surname>Neeley</surname><given-names>Aimee</given-names></name>
          
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        <contrib contrib-type="author" corresp="no" rid="aff26">
          <name><surname>Novak</surname><given-names>Michael</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff36">
          <name><surname>O'Dowd</surname><given-names>Leonie</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff37">
          <name><surname>Ondrusek</surname><given-names>Michael</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" deceased="yes" corresp="no" rid="aff2">
          <name><surname>Platt</surname><given-names>Trevor</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff38">
          <name><surname>Poulton</surname><given-names>Alex J.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-5149-6961</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff39">
          <name><surname>Repecaud</surname><given-names>Michel</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff53">
          <name><surname>Röttgers</surname><given-names>Rüdiger</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff9">
          <name><surname>Schroeder</surname><given-names>Thomas</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Smyth</surname><given-names>Timothy</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-0659-1422</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff40">
          <name><surname>Smythe-Wright</surname><given-names>Denise</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff41">
          <name><surname>Sosik</surname><given-names>Heidi M.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4591-2842</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff26">
          <name><surname>Thomas</surname><given-names>Crystal</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff54">
          <name><surname>Thomas</surname><given-names>Rob</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Tilstone</surname><given-names>Gavin</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Tracana</surname><given-names>Andreia</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff42">
          <name><surname>Twardowski</surname><given-names>Michael</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff52">
          <name><surname>Vellucci</surname><given-names>Vincenzo</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5392-7457</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff43">
          <name><surname>Voss</surname><given-names>Kenneth</given-names></name>
          
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        <contrib contrib-type="author" corresp="no" rid="aff26">
          <name><surname>Werdell</surname><given-names>Jeremy</given-names></name>
          
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        <contrib contrib-type="author" deceased="yes" corresp="no" rid="aff44">
          <name><surname>Wernand</surname><given-names>Marcel</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff9">
          <name><surname>Wojtasiewicz</surname><given-names>Bozena</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff45">
          <name><surname>Wright</surname><given-names>Simon</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff13">
          <name><surname>Zibordi</surname><given-names>Giuseppe</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>MARE - Marine and Environmental Sciences Centre,
Faculdade de Ciências, Universidade de Lisboa, <?xmltex \hack{\break}?>Campo Grande, 1749-016
Lisboa, Portugal</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Plymouth Marine Laboratory, Plymouth PL1 3DH,
UK</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>EUMETSAT, Eumetsat-Allee 1, 64295 Darmstadt,
Germany</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Sorbonne Université, CNRS, Laboratoire
d'Océanographie de Villefranche, LOV, <?xmltex \hack{\break}?>06230 Villefranche-sur-Mer,
France</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Remote Sensing and Satellite Research Group, School of
Earth and Planetary Sciences, <?xmltex \hack{\break}?>Curtin University, Perth, WA 6845,
Australia</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>University of Southern Mississippi, Stennis Space Center,
MS, USA</institution>
        </aff>
        <aff id="aff7"><label>7</label><institution>Bigelow Laboratory for Ocean Sciences, 60 Bigelow Dr.,
East Boothbay ME 04544, Maine, USA</institution>
        </aff>
        <aff id="aff8"><label>8</label><institution>ARGANS Ltd, UK</institution>
        </aff>
        <aff id="aff9"><label>9</label><institution>CSIRO Oceans and Atmosphere, Australia</institution>
        </aff>
        <aff id="aff10"><label>10</label><institution>Australian Research Data Commons, Caulfield East,
Australia</institution>
        </aff>
        <aff id="aff11"><label>11</label><institution>Bayworld Centre for Research and Education, Cape Town,
South Africa</institution>
        </aff>
        <aff id="aff12"><label>12</label><institution>Université du Québec à Rimouski, Rimouski
(Québec), Canada</institution>
        </aff>
        <aff id="aff13"><label>13</label><institution>European Commission, Joint Research Centre, Ispra,
Italy</institution>
        </aff>
        <aff id="aff14"><label>14</label><institution>Dokuz Eylul University, Institute of Marine Science and
Technology, Izmir, Turkey</institution>
        </aff>
        <aff id="aff15"><label>15</label><institution>Institute of Marine Research, Bergen,
Norway</institution>
        </aff>
        <aff id="aff16"><label>16</label><institution>Alfred-Wegener-Institute Helmholtz Centre for Polar and
Marine Research, Bremerhaven, Germany</institution>
        </aff>
        <aff id="aff17"><label>17</label><institution>Institute of Environmental Physics, University Bremen,
Bremen, Germany</institution>
        </aff>
        <aff id="aff18"><label>18</label><institution>CNR – ISMAR, Rome, Italy</institution>
        </aff>
        <aff id="aff19"><label>19</label><institution>Monterey Bay Aquarium Research Institute, Moss Landing,
CA, USA</institution>
        </aff>
        <aff id="aff20"><label>20</label><institution>PLOCAN-Oceanic Platform of the Canary Islands. Carretera
de Taliarte, 35214 Telde, Gran Canaria, Spain</institution>
        </aff>
        <aff id="aff21"><label>21</label><institution>Naval Research Laboratory, Stennis Space Center, MS,
USA</institution>
        </aff>
        <aff id="aff22"><label>22</label><institution>Scripps Institution of Oceanography, University of
California San Diego, CA, USA</institution>
        </aff>
        <aff id="aff23"><label>23</label><institution>Spanish Institute of Oceanography (IEO), Corazón de
María 8, 28002 Madrid, Spain</institution>
        </aff>
        <aff id="aff24"><label>24</label><institution>Plentziako Itsas Estazioa/Euskal Herriko Unibetsitatea
(PIE/EHU), Areatza z/g, 48620 Plentzia, Spain</institution>
        </aff>
        <aff id="aff25"><label>25</label><institution>Environmental Research Institute, North Highland
College, University of the Highlands and Islands, <?xmltex \hack{\break}?>Thurso, Scotland,
UK</institution>
        </aff>
        <aff id="aff26"><label>26</label><institution>NASA Goddard Space Flight Center, Greenbelt, Maryland,
USA</institution>
        </aff>
        <aff id="aff27"><label>27</label><institution>Earth Observation and Geoinformatics Division, National
Space Research Institute (INPE),<?xmltex \hack{\break}?> Sao Jose dos Campos, Brazil</institution>
        </aff>
        <aff id="aff28"><label>28</label><institution>Operational Oceanography Group, Federal Maritime and
Hydrographic Agency, Hamburg, Germany</institution>
        </aff>
        <aff id="aff29"><label>29</label><institution>Department of Ecology, Environment and Plant Sciences,
Stockholm University, 106 91 Stockholm, Sweden</institution>
        </aff>
        <aff id="aff30"><label>30</label><institution>University of California Santa Cruz, Santa Cruz, CA
USA</institution>
        </aff>
        <aff id="aff31"><label>31</label><institution>Instituto del Mar del Perú, Callao,
Peru</institution>
        </aff>
        <aff id="aff32"><label>32</label><institution>Laboratoire d'Océanologie et de Géosciences,
Université du Littoral-Côte-d'Opale, Université Lille, <?xmltex \hack{\break}?>CNRS, UMR
8187, LOG, 32 avenue Foch, Wimereux, France</institution>
        </aff>
        <aff id="aff33"><label>33</label><institution>Physics Dept, University of Strathclyde, Glasgow, G4
0NG, Scotland</institution>
        </aff>
        <aff id="aff34"><label>34</label><institution>NASA Goddard Space Flight Center, Wallops Flight
Facility, Wallops Island, VA, USA</institution>
        </aff>
        <aff id="aff35"><label>35</label><institution>Institute for Marine Remote Sensing/ImaRS, College of
Marine Science, <?xmltex \hack{\break}?>University of South Florida, FL, USA</institution>
        </aff>
        <aff id="aff36"><label>36</label><institution>Fisheries and Ecosystem Advisory Services, Marine
Institute, Rinville – Oranmore, Galway, Ireland</institution>
        </aff>
        <aff id="aff37"><label>37</label><institution>NOAA/NESDIS/STAR/SOCD, College Park, MD,
USA</institution>
        </aff>
        <aff id="aff38"><label>38</label><institution>Lyell Centre for Earth and Marine Science and
Technology, Heriot-Watt University, Edinburgh, UK</institution>
        </aff>
        <aff id="aff39"><label>39</label><institution>IFREMER Centre de Brest, Plouzane, France</institution>
        </aff>
        <aff id="aff40"><label>40</label><institution>Ocean Biogeochemistry and Ecosystems, National
Oceanography Centre, <?xmltex \hack{\break}?>Waterfront Campus, Southampton, UK</institution>
        </aff>
        <aff id="aff41"><label>41</label><institution>Biology Department, Woods Hole Oceanographic
Institution, Woods Hole, MA, USA</institution>
        </aff>
        <aff id="aff42"><label>42</label><institution>Harbor Branch Oceanographic Institute, Fort Pierce, FL,
USA</institution>
        </aff>
        <aff id="aff43"><label>43</label><institution>University of Miami, Coral Gables, FL,
USA</institution>
        </aff>
        <aff id="aff44"><label>44</label><institution>Royal Netherlands Institute for Sea Research, Texel,
the Netherlands</institution>
        </aff>
        <aff id="aff45"><label>45</label><institution>Australian Antarctic Division; IMAS, University of
Tasmania; and the Antarctic Climate and Ecosystems Cooperative Research
Centre, Hobart, Australia</institution>
        </aff>
        <aff id="aff46"><label>46</label><institution>Centre for Geography and Environmental Science, College
of Life and Environmental Sciences, <?xmltex \hack{\break}?>Penryn Campus, University of Exeter,
Cornwall TR10 9FE, UK</institution>
        </aff>
        <aff id="aff47"><label>47</label><institution>Science Systems and Applications, Inc., 10210 Greenbelt
Road, Suite 600, Lanham, MD, USA</institution>
        </aff>
        <aff id="aff48"><label>48</label><institution>Earth Research Institute, University of California,
Santa Barbara, California, USA</institution>
        </aff>
        <aff id="aff49"><label>49</label><institution>College of Marine Science, University of South Florida,
140 Seventh Avenue, South, <?xmltex \hack{\break}?>St. Petersburg FL 33701, USA</institution>
        </aff>
        <aff id="aff50"><label>50</label><institution>School for Marine Science and Technology, University of
Massachusetts Dartmouth, 836 South Rodney French Boulevard, New Bedford MA
02744, USA</institution>
        </aff>
        <aff id="aff51"><label>51</label><institution>Ocean Chemistry &amp; Ecosystems Division, NOAA Atlantic
Oceanographic and Meteorological Laboratory, Miami, FL, USA</institution>
        </aff>
        <aff id="aff52"><label>52</label><institution>Sorbonne Université, CNRS, Institut de la Mer de
Villefranche, IMEV, 06230 Villefranche-sur-Mer, France</institution>
        </aff>
        <aff id="aff53"><label>53</label><institution>Institute of Carbon Cycles, Helmholtz-Zentrum Hereon,
Geesthacht, Germany</institution>
        </aff>
        <aff id="aff54"><label>54</label><institution>Marine Institute, Rinville, Oranmore, Galway,
Ireland</institution>
        </aff>
        <aff id="aff55"><label>55</label><institution>University of Miami Cooperative Institute for Marine
&amp; Atmospheric Studies (CIMAS), <?xmltex \hack{\break}?>4600 Rickenbacker Causeway, Miami FL
33149, USA</institution>
        </aff>
        <aff id="aff56"><label>56</label><institution>AIR Centre – Atlantic International Research Centre,
Parque de Ciência e Tecnologia da Ilha Terceira, 9700-702 Angra do
Heroísmo, Portugal</institution>
        </aff><author-comment content-type="deceased"><p/></author-comment>
      </contrib-group>
      <author-notes><corresp id="corr1">André Valente (adovalente@fc.ul.pt)</corresp></author-notes><pub-date><day>23</day><month>December</month><year>2022</year></pub-date>
      
      <volume>14</volume>
      <issue>12</issue>
      <fpage>5737</fpage><lpage>5770</lpage>
      <history>
        <date date-type="received"><day>11</day><month>May</month><year>2022</year></date>
           <date date-type="rev-request"><day>20</day><month>May</month><year>2022</year></date>
           <date date-type="rev-recd"><day>3</day><month>November</month><year>2022</year></date>
           <date date-type="accepted"><day>10</day><month>November</month><year>2022</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2022 </copyright-statement>
        <copyright-year>2022</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://essd.copernicus.org/articles/.html">This article is available from https://essd.copernicus.org/articles/.html</self-uri><self-uri xlink:href="https://essd.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://essd.copernicus.org/articles/.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d1e1190">A global in situ data set for validation of ocean colour products
from the ESA Ocean Colour Climate Change Initiative (OC-CCI) is presented.
This version of the compilation, starting in 1997, now extends to 2021,
which is important for the validation of the most recent satellite optical
sensors such as Sentinel 3B OLCI and NOAA-20 VIIRS. The data set comprises
in situ observations of the following variables: spectral remote-sensing
reflectance, concentration of chlorophyll-<inline-formula><mml:math id="M1" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, spectral inherent optical
properties, spectral diffuse attenuation coefficient, and total suspended
matter. Data were obtained from multi-project archives acquired via open
internet services or from individual projects acquired directly from data
providers. Methodologies were implemented for homogenization, quality
control, and merging of all data. Minimal changes were made on the original
data, other than conversion to a standard format, elimination of some points,
after quality control and averaging of observations that were close in time
and space. The result is a merged table available in text format. Overall,
the size of the data set grew with 148 432 rows, with each row representing a
unique station in space and time (cf. 136 250 rows in previous version;
Valente et al., 2019). Observations of remote-sensing reflectance increased
to 68 641 (cf. 59 781 in previous version; Valente et al., 2019). There was
also a near tenfold increase in chlorophyll data since 2016. Metadata of
each in situ measurement (original source, cruise or experiment, principal
investigator) are included in the final table. By making the metadata
available, provenance is better documented and it is also possible to
analyse each set of data separately. The compiled data are available at
<ext-link xlink:href="https://doi.org/10.1594/PANGAEA.941318" ext-link-type="DOI">10.1594/PANGAEA.941318</ext-link> (Valente et al., 2022).</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e1212">Data collected by satellite ocean colour sensors provide synoptic
observations on ocean productivity and the variability of marine
environment at high spatial and temporal resolutions. Ocean colour data,
recognized as Essential Climate Variables by the Global Climate Observation
System, are invaluable to address key issues, such as the detection of
marine ecosystem modifications due to climate change, the study of the
global carbon cycle, and the assessment of coastal water quality degradations
(IOCCG, 2008; McClain, 2009). A main goal of the ESA Ocean Colour Climate
Change Initiative (OC-CCI) was to generate a suite of ocean colour products
for use in climate studies (Sathyendranath et al., 2019). For this purpose,
the existing major data streams for ocean colour were blended into a
coherent ocean colour data record. Currently, data from five ocean colour
sensors are being merged: the Sea-viewing Wide Field-of-view Sensor
(SeaWiFS) of NASA, the Medium Resolution Imaging Spectrometer (MERIS) of
ESA, the MODerate resolution Imaging Spectro-radiometer (MODIS) of NASA, the
Visible Infrared Imaging Radiometer Suite (VIIRS) of NASA and NOAA, and the
Ocean and Land Colour Instrument (OLCI) of ESA. For the validation of the
ESA OC-CCI satellite products, a compilation of in situ bio-optical data was
produced. This paper presents that compilation.</p>
      <p id="d1e1215">There are several sets of in situ bio-optical data worldwide suitable for
validation of ocean colour satellite data. While some are managed by the
data producers, others are in international repositories with contributions
from multiple scientists. Many have rigid quality controls and are built
specifically for ocean colour validation. The use of only any one of these
data sets would limit the amount of data in validation exercises. It is
therefore vital to merge all these in situ data sets to maximize the number
of matchups available for validation, with wider distribution in time and
space, and consequently to reduce uncertainties in the validation
exercise. However, merging several data sets together can be a complicated
task. First, it is necessary to acquire and harmonize all data sets into a
single standard format. Second, during the merging, duplicates between data
sets must be identified and removed. Third, the metadata should be
propagated throughout the process and made available in the final merged
data set. Ideally, the compiled merged data set would be made available as a
simple text table to facilitate ease of access and manipulation. In this
work, such unification of multiple data sets is presented. This was done for
the validation of the ESA OC-CCI ocean colour products, but with the intent
to also serve the broader user community.</p>
      <p id="d1e1218">A merged data set is not without drawbacks: it is likely to be large (with
hundreds of thousands of observations) and so not always easy to manipulate;
because the merging is done on pre-existing, processed databases, it is not
possible to have full control of the whole processing chain. Hence, the data set
would be a collection of observations collected by several investigators
using different instruments, sampling methods, and protocols, which might
eventually have been modified by the processing routines used by the
repositories or archives. To minimize these potential drawbacks, we have,
for the most part, incorporated only data sets that have emerged from the
long-term efforts of the ocean colour and biological oceanographical
communities to provide scientists with high-quality in situ data, and
implemented additional quality checks on the data to enhance confidence in
the quality of the merged product. Nevertheless, it is still recognized that
different and unpredictable uncertainties may affect data from the diverse
sources due to the use of a variety of field/laboratory instruments, methods,
and data reduction schemes.</p>
      <p id="d1e1221">Methodologies used for data harmonization and integration as well as a
description of the acquired individual data sets are provided in Sect. 2.
Geographic distribution and other characteristics of the final merged data
set are shown in Sect. 3, while Sect. 4 provides an overview of the data.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Data and methods</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Pre-processing and merging</title>
      <p id="d1e1239">The compiled global in situ bio-optical data set described in this work has
an emphasis, though not exclusively, on open-ocean data. It comprises the
following variables: remote-sensing reflectance (“rrs”), chlorophyll-<inline-formula><mml:math id="M2" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration (“chla”), algal pigment absorption coefficient (“aph”),
detrital and coloured dissolved organic matter absorption coefficient
(“adg”), particle backscattering coefficient (“bbp”), diffuse attenuation
coefficient for downward irradiance (“kd”) and total suspended matter
(“tsm”). The variables “rrs”, “aph”, “adg”, “bbp”, and “kd” are spectrally
dependent, and this dependence is hereafter implied. The data were
compiled from 27 sources (MOBY, BOUSSOLE, AERONET-OC, SeaBASS, NOMAD,
MERMAID, AMT, ICES, HOT, GeP&amp;CO, AWI, ARCSSPP, BARENTSSEA, BATS, BIOCHEM,
BODC, CALCOFI, CCELTER, CIMT, COASTCOLOUR, ESTOC, IMOS, MAREDAT, PALMER,
SEADATANET, TPSS, and TARA), each one described in Sect. 2.2. The data
sources in this work should also be viewed as groups of data that were
acquired from a specific source, standardized with a specific method, and
later merged into the compilation. The compiled in situ observations are
essentially surface (i.e. no information depending on depth), have a global
distribution, and cover the period 1997 to 2021. The listed variables, with
the exception of total suspended matter, were chosen as they are the
operational satellite ocean colour products of ESA OC-CCI project.</p>
      <p id="d1e1249">The compilation is provided in the format of three 2-dimensional main
tables that relate to each other via one unique key identifying each row.
The format of the tables is described in Appendix B. Despite being provided
in three main tables, the compilation should still be viewed conceptually as
one unique table, and as such it is still described in that way. The data
set contains two flags: “flag_time” and
“flag_chl_method”. The first is because
three data sources were used (ESTOC, MAREDAT, and TPSS) where information on
time (hour of the day) was not available. The time for these observations
was set to 12:00:00 (UTC) and the observations were flagged with “1” in
column “flag_time”. A second flag was necessary because in
two data sources (ARCSSPP and SEADATANET) there was uncertainty on whether
the compiled chlorophyll concentrations were measured using fluorometric,
spectrophotometric, or HPLC (high-performance liquid chromatography)  methods. The compiled chlorophyll observations
from these two data sources were flagged with “1” in column
“flag_chl_method” and were marked as
“chla_fluor”.</p>
      <p id="d1e1252">This is the third version of the compilation. The first and second versions
were described in Valente et al. (2016, 2019),
respectively. Compared to the previous version (Valente et al., 2019), the
present version contains more measurements of “rrs”, “chla”, and “aph”.
The “rrs” stations increased by <inline-formula><mml:math id="M3" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">15</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> (i.e. from 59 781
to 68 641), resulting from updates of AERONET-OC, BOUSSOLE, MOBY, MERMAID,
and AWI. The new stations are mainly for the period of 2019–2021 (previous
version had “rrs” data until 2018). Regarding “chla”, a major increase
in the number of recent observations was obtained. The previous version had
“chla” data until 2017, with 533 stations for the period 2016–2017. The
current version has 5140 stations for 2016–2021, which constitutes a near
tenfold (964 %) increase since 2016. The new “chla” data originate
from updates of BOUSSOLE, MERMAID, SeaBASS, HOT, AMT, PALMER, CCELTER,
CALCOFI, AWI, and IMOS. As for the number of “aph” stations, it increased
by <inline-formula><mml:math id="M4" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">30</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> (i.e. from 3293 to 4265), with most of the
data between 2012–2020 (previous version finished in 2012). The new “aph”
data come from updates of SeaBASS and AWI. Overall, the main objective of
the present version was to populate the compilation with more recent data.
Methodologies for data harmonization and integration (described below) have
not been altered relative to the last version.</p>
      <p id="d1e1281">Remote-sensing reflectance is a primary ocean colour product defined as
“rrs <inline-formula><mml:math id="M5" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> Lw/Es”, where “Lw” is the upward water-leaving radiance and
“Es” is the total downward irradiance at sea level. Another quantity that
is often required is the “normalized” water-leaving radiance (“nLw”)
(Gordon and Clark, 1981), which is related to remote-sensing reflectance via
“rrs <inline-formula><mml:math id="M6" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> nLw/Fo”, where “Fo” is the top-of-the-atmosphere solar
irradiance. If not directly available, remote-sensing reflectance was
calculated through the equations described above, depending on the format of
the original data. The original data were acquired in an advanced form
(e.g. time-averaged, extrapolated to surface) from nine data sources
designed for ocean colour validation and applications (MOBY, BOUSSOLE,
AERONET-OC, SeaBASS, NOMAD, MERMAID, COASTCOLOUR, TARA, AWI), therefore
only requiring the conversion to a common format. In processing by space
agencies, the quantity “rrs” is normalized to a single Sun-viewing
geometry (Sun at zenith and nadir viewing) taking in account the
bidirectional effects as described in Morel and Gentili (1996) and Morel et al. (2002). Thus, for consistency with satellite “rrs” product, the latter
normalization was applied to the in situ “rrs”.</p>
      <p id="d1e1299">Chlorophyll-<inline-formula><mml:math id="M7" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration is a proxy measure for phytoplankton biomass and
one of the most-widely used satellite ocean colour products (IOCCG, 2008).
To validate satellite-derived chlorophyll-<inline-formula><mml:math id="M8" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration, two different
variables were compiled: one of these represents chlorophyll-<inline-formula><mml:math id="M9" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> measurements
made through fluorometric or spectrophotometric methods, referred to
hereafter as “chla_fluor”, and the other is the chlorophyll
concentration derived from HPLC (high-performance liquid chromatography)
measurements, referred to hereafter as “chla_hplc”. The
chlorophyll data were compiled from the following 25 data sources: BOUSSOLE,
SeaBASS, NOMAD, MERMAID, AMT, ICES, HOT, GeP&amp;CO, AWI, ARCSSPP,
BARENTSSEA, BATS, BIOCHEM, BODC, CALCOFI, CCELTER, CIMT, COASTCOLOUR, ESTOC,
IMOS, MAREDAT, PALMER, SEADATANET, TPSS, and TARA. One requirement for
“chla_fluor” measurements was that they were made using in
vitro methods (i.e. based on extractions of chlorophyll-<inline-formula><mml:math id="M10" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>). Although this
severely decreased the number of observations, since in vivo fluorometry
(e.g. fluorometers mounted on CTDs) is widely available in oceanographic
databases, it was decided to exclude such data because of potential problems
with the calibration of in situ fluorometer data. The variable
“chla_hplc” was calculated by summing all reported
chlorophyll-<inline-formula><mml:math id="M11" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> derivatives, including divinyl chlorophyll-<inline-formula><mml:math id="M12" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, epimers,
allomers, and chlorophyllide-<inline-formula><mml:math id="M13" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. The two chlorophyll variables are retained
separately in the database to facilitate their use. HPLC measurements could
be considered of higher quality, but fluorometric measurements are more
numerous. Thus, one option for users is to use “chla_fluor”
only when there are no “chla_hplc” measurements available.
To be consistent with satellite-derived chlorophyll values, which are
derived from the light emerging from the upper layer of the ocean, all
chlorophyll observations in the top 10 m (replicates at the same depth,
or measurements at multiple depths) were averaged if the coefficient of
variation among observations was less than 50 %, otherwise they were
discarded. The averages were then assigned to the surface. The depth of 10 m
was chosen as a compromise between clear oligotrophic and turbid eutrophic
waters. Other methods, such as chlorophyll depth-averages using local
attenuation conditions (Morel and Maritorena, 2001), require observations at
multiple depths, which, given our decision to use only in vitro
measurements, would have considerably reduced the final number of
observations.</p>
      <p id="d1e1352">Regarding the inherent optical properties (“aph”, “adg”, “bbp”), if not
already calculated and provided in the contributed data sets, they were
computed from related variables that were available: particle absorption
(“ap”), detrital absorption (“ad”), coloured dissolved organic matter (CDOM)
absorption (“ag”), and total backscattering (“bb”). The following equations were
used: “adg <inline-formula><mml:math id="M14" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> ad <inline-formula><mml:math id="M15" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ag”, “ap <inline-formula><mml:math id="M16" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> aph <inline-formula><mml:math id="M17" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ad”, and “bb <inline-formula><mml:math id="M18" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> bbp <inline-formula><mml:math id="M19" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>
bbw”. For the latter equation, the variable ”bbw” was computed using “bbw
<inline-formula><mml:math id="M20" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> bw/2”, where “bw” is the scattering coefficient of seawater derived
from Zhang et al. (2009). The diffuse attenuation coefficient for downward
irradiance (“kd”) did not require any conversion and was compiled as
originally acquired. Observations of inherent optical properties (surface
values) and diffuse attenuation coefficient for downward irradiance were
acquired in total from six data sources designed for ocean colour validation
and applications (SeaBASS, NOMAD, MERMAID, AWI, COASTCOLOUR, TPSS), thus
already subject to the processing routines of these data sets. Concerning
total suspended matter, these data were compiled as originally available
from MERMAID and COASTCOLOUR.</p>
      <p id="d1e1405">The merged data set was compiled from 27 sets of in situ data, which were
obtained individually either from archives that incorporate data from
multiple contributors (SeaBASS, NOMAD, MERMAID, ICES, ARCSSPP, BIOCHEM,
BODC, COASTCOLOUR, MAREDAT, SEADATANET), or from particular contributors,
measurement programs, or projects (MOBY, BOUSSOLE, AERONET-OC, HOT,
GeP&amp;CO, AMT, AWI, BARENTSSEA, BATS, CALCOFI, CCELTER, CIMT, ESTOC, IMOS,
PALMER, TPSS, TARA), and were subsequently homogenized and merged. Data
contributors are listed in Table 2 and in the auxiliary material. There were
methodological differences between data sets. Therefore, after acquisition,
and prior to any merging, each set of data was pre-processed for quality
control and converted to a common format. During this process, data were
discarded if they had: (1) unrealistic or missing date and geographic
coordinate fields; (2) poor quality (e.g. original flags) or method of
observation that did not meet the criteria for the data set (e.g. in situ
fluorescence for chlorophyll concentration); and (3) spuriously high or low
data. For the last, the following limits were imposed: for
“chla_fluor” and “chla_hplc” [0.001–100]
mg m<inline-formula><mml:math id="M21" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; for “rrs” [0-0.15] sr<inline-formula><mml:math id="M22" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; for “aph”, “adg”, and
“bbp” [0.0001–10] m<inline-formula><mml:math id="M23" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; for “tsm” [0–1000] g m<inline-formula><mml:math id="M24" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; and for “kd”
[(aw(<inline-formula><mml:math id="M25" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula>)-10] m<inline-formula><mml:math id="M26" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, where “aw” is the pure water absorption
coefficients derived from Pope and Fry (1997). Also, during this stage,
three metadata strings were attributed to each observation: “dataset”,
“subdataset”, and “contributor”. The “dataset” contains the name of the
original set of data and can only be one of the following: “aoc”,
“boussole”, “mermaid”, “moby”, “nomad”, “seabass”, “hot”,
“ices”, “amt”, “gepco”, “arcsspp”, “awi“, “barentssea“,
“bats“, “biochem“, “bodc“, “calcofi“, “cc“, “ccelter“, “cimt“,
“estoc“, “imos“, “maredat“, “palmer“, “seadatanet“, “tpss“, and
“tara”. The “subdataset” starts with the “dataset” identifier and is
followed by additional information about the data, as <inline-formula><mml:math id="M27" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula>dataset<inline-formula><mml:math id="M28" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula>_<inline-formula><mml:math id="M29" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula>cruise/station/site<inline-formula><mml:math id="M30" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula>) (e.g. “seabass_car81”).
The “contributor” contains the name of the data contributor. An effort was
made to homogenize the names of data contributors from the different sets of
data. These three metadata are the link to trace each observation to its
origin and were propagated throughout the processing. Finally, this
processing stage ended with each set of data being scanned for replicate
variable data and replicate station data, which when found, were averaged if
the coefficient of variation was less than 50 %, otherwise they were
discarded. Replicates were defined as multiple observations of the same
variable, with the same date, time, latitude, longitude, and depth. Replicate
station data were defined as multiple measurements of the same variable,
with the same date, time, latitude, and longitude. For the latter case, a
search window of 5 min in time and 200 m in distance was given to
account for station drift. A small number of observations that were
identified as replicates had a different “subdataset” identifiers (i.e.
different cruise names). These observations were considered suspicious if
the values were different and discarded. If the values were the same, one
of the observations was retained. This possibly originated from the same
group of data being contributed to an archive by two different data
contributors.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e1507">The standard variables, nomenclatures, and units in the final table.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Variable/column</oasis:entry>
         <oasis:entry colname="col2">Description and units</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">idx</oasis:entry>
         <oasis:entry colname="col2">Unique key identifying each row</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">time</oasis:entry>
         <oasis:entry colname="col2">GMT, <inline-formula><mml:math id="M31" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula>YYYY-MM-DD<inline-formula><mml:math id="M32" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula>T<inline-formula><mml:math id="M33" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula>HH:MM:SS<inline-formula><mml:math id="M34" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula>Z</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">lat</oasis:entry>
         <oasis:entry colname="col2">Decimal degree, <inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">90</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">90</mml:mn></mml:mrow></mml:math></inline-formula>, south negative</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">lon</oasis:entry>
         <oasis:entry colname="col2">Decimal degree, <inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">180</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">180</mml:mn></mml:mrow></mml:math></inline-formula>, west negative</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">depth_water</oasis:entry>
         <oasis:entry colname="col2">Sampling depth (m) – all assigned to zero</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">chla_hplc</oasis:entry>
         <oasis:entry colname="col2">Total chlorophyll-<inline-formula><mml:math id="M37" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration determined from HPLC method (mg m<inline-formula><mml:math id="M38" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">chla_fluor</oasis:entry>
         <oasis:entry colname="col2">Chlorophyll-<inline-formula><mml:math id="M39" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration determined from fluorometric or spectrophotometric methods (mg m<inline-formula><mml:math id="M40" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">rrs_<inline-formula><mml:math id="M41" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula>band<inline-formula><mml:math id="M42" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Remote-sensing reflectance (sr<inline-formula><mml:math id="M43" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">aph_<inline-formula><mml:math id="M44" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula>band<inline-formula><mml:math id="M45" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Algal pigment absorption coefficient (m<inline-formula><mml:math id="M46" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">adg_<inline-formula><mml:math id="M47" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula>band<inline-formula><mml:math id="M48" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Detrital plus CDOM absorption coefficient (m<inline-formula><mml:math id="M49" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">bbp_<inline-formula><mml:math id="M50" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula>band<inline-formula><mml:math id="M51" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Particle backscattering coefficient (m<inline-formula><mml:math id="M52" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">kd_<inline-formula><mml:math id="M53" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula>band<inline-formula><mml:math id="M54" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Diffuse attenuation coefficient for downward irradiance (m<inline-formula><mml:math id="M55" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">tsm</oasis:entry>
         <oasis:entry colname="col2">Total suspended matter (g m<inline-formula><mml:math id="M56" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">etopo1</oasis:entry>
         <oasis:entry colname="col2">Water depth from ETOPO1 (m)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">chla_hplc_dataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “chla_hplc”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">chla_hplc_subdataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “chla_hplc”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">chla_hplc_contributor</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “chla_hplc”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">chla_fluor_dataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “chla_fluor”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">chla_fluor_subdataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “chla_fluor”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">chla_fluor_contributor</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “chla_fluor”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">rrs_dataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “rrs”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">rrs_subdataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “rrs”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">rrs_contributor</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “rrs”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">aph_dataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “aph”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">aph_subdataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “aph”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">aph_contributor</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “aph”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">adg_dataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “adg”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">adg_subdataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “adg”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">adg_contributor</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “adg”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">bbp_dataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “bbp”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">bbp_subdataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “bbp”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">bbp_contributor</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “bbp”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">kd_dataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “kd”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">kd_subdataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “kd”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">kd_contributor</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “kd”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">tsm_dataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “tsm”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">tsm_subdataset</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “tsm”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">tsm_contributor</oasis:entry>
         <oasis:entry colname="col2">Metadata string for “tsm”</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">flag_time</oasis:entry>
         <oasis:entry colname="col2">“1” if observation without time (set to 12:00:00 UTC)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">flag_chl_method</oasis:entry>
         <oasis:entry colname="col2">“1” if observation as unknown chlorophyll method</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e2131">Once a set of data was homogenized, its data were integrated into a unique
table. This final merging focused on the removal of duplicates between the
sets of data. Although some duplicates are known (e.g. MOBY, BOUSSOLE,
AERONET-OC, and NOMAD data are found in SeaBASS and MERMAID), others are
unknown (e.g. how many of GeP&amp;CO, ICES, AMT, and HOT are within NOMAD,
SeaBASS, and MERMAID). Therefore, duplicates were identified using the
metadata (“dataset” and “subdataset”) when possible, and temporal–spatial
matches, as an additional precaution. For temporal–spatial matches, several
thresholds were used, but typically 5 min and 200 m were taken to
be sufficient to identify most duplicated data, which reflected small
differences in time, latitude, and longitude, between the different sets of
data. Larger thresholds were used in some cases as a cautionary procedure.
This was the case when searching for NOMAD data in other data sets, because
NOMAD includes a few cases where merging of radiometric and pigment data was
done with large spatial–temporal thresholds (Werdell and Bailey, 2005). A
large temporal threshold was also used when integrating observations from
the three data sources that did not have time available (ESTOC, MAREDAT, and
TPSS). In regard to all data, if duplicates were found, data from the NOMAD
data set were selected first, followed by data from individual projects or
contributors (MOBY, BOUSSOLE, AERONET-OC, AMT, HOT,GeP&amp;CO, AWI,
BARENTSSEA, BATS, CALCOFI, CCELTER, CIMT, ESTOC, IMOS, PALMER, TPSS, and
TARA) and finally for the remaining data sets (SeaBASS, MERMAID, ICES,
ARCSSPP, BIOCHEM, BODC, COASTCOLOUR, MAREDAT, and SEADATANET). This procedure
was chosen to preserve the NOMAD data set as a whole, since it is widely
used in ocean colour validation. It should be noted that, by this procedure,
data from individual projects or contributors may be listed under NOMAD
(e.g. some PALMER data are found in NOMAD with metadata string
“nomad_palmer_lter”). After giving priority
to NOMAD, the priority was generally given to data from individual projects
or contributors, but due to an incremental approach where only new data are
added to previous versions of the compilation, some data from individual
projects or contributors (BATS, CALCOFI, CIMT, PALMER, and TPSS) added in
later stages, may be found under other data sources. This occurs mainly for
BATS and CALCOFI, which have their earlier chlorophyll data in SeaBASS with
metadata strings “seabass_bats*” and
“seabass_cal*”, and CIMT which has some of its data under
COASTCOLOUR. After all data from a given source were free of duplicates,
they were merged consecutively by variable in the final table. During this
process, we also searched for rows (stations) that were separated from each
other by time differences less than 5 min and horizontal spatial
differences of less than 200 m. When such rows were found, the
observations in those rows were merged into a single row. The compiled
merged data were compared with the original sets to certify that no errors
occurred during the merging. As a final step, a water-column (station) depth
was recorded for each observation, which was the closest water-column depth
from the ETOPO1 global relief model (National Geophysical Data Center
ETOPO1; Amante and Eakins, 2009). For observations where the closest water
depth was above sea level (e.g. data collected very near the coast), it was
given the value of zero.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e2138">Original sets of data and data contributors in the final table.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.90}[.90]?><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="60pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="206pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="184pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Data source</oasis:entry>
         <oasis:entry colname="col2">Description</oasis:entry>
         <oasis:entry colname="col3">Data contributors</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Marine optical buoy (MOBY)</oasis:entry>
         <oasis:entry colname="col2">Daily observations of remote-sensing reflectance, measured by a fixed mooring system, located west of the Hawaiian Island of Lanai. Data compiled between 1997–2021. Data were obtained from the MOBY website. Compiled standard variable: “rrs”.</oasis:entry>
         <oasis:entry colname="col3">Paul DiGiacomo, Kenneth Voss</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Bouée pour l'acquisition d'une Série Optique à Long Terme (BOUSSOLE)</oasis:entry>
         <oasis:entry colname="col2">High-frequency (15 min) observations of remote-sensing reflectance, from a fixed mooring system, located in the western Mediterranean Sea. Measurements of chlorophyll-<inline-formula><mml:math id="M57" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration are also available at the mooring locations. Remote-sensing reflectance and chlorophyll-<inline-formula><mml:math id="M58" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> data were compiled between 2003–2019 and 2001–2020, respectively. Data were provided by David Antoine. Compiled standard variables: “rrs”, “chla_hplc”.</oasis:entry>
         <oasis:entry colname="col3">David Antoine, Vicenzo Vellucci</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">AErosol RObotic NETwork-Ocean Color (AERONET-OC)</oasis:entry>
         <oasis:entry colname="col2">Daily observations of remote-sensing reflectance, measured by modified sun photometers. Data compiled between 2002–2020. Sites included: Abu_Al_Bukhoosh (<inline-formula><mml:math id="M59" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">25</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M60" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M61" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">53</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M62" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E), COVE_SEAPRISM (<inline-formula><mml:math id="M63" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">36</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M64" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M65" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">75</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M66" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W), Gloria (<inline-formula><mml:math id="M67" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">44</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M68" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">29</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M70" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E), Gustav_Dalen_Tower (<inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">58</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M72" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M73" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">17</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M74" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E), Helsinki Lighthouse (<inline-formula><mml:math id="M75" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">59</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M76" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">24</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M78" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E), LISCO (<inline-formula><mml:math id="M79" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M80" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">73</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M82" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W), Lucinda (<inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">18</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M84" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S, <inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">146</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M86" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E), MVCO (<inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">41</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M88" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">70</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M90" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W), Palgrunden (<inline-formula><mml:math id="M91" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">58</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M92" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M93" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">13</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M94" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E), Venice (<inline-formula><mml:math id="M95" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">45</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M96" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M97" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M98" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E), WaveCIS_Site_CSI_6 (<inline-formula><mml:math id="M99" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">28</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M100" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M101" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">90</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M102" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W). Data were obtained from the AERONET-OC website. Compiled standard variable: “rrs”.</oasis:entry>
         <oasis:entry colname="col3">Sam Ahmed (LISCO), Hui Feng (MVCO), Alex Gilerson (LISCO), Brent Holben (COVE-SEAPRISM), Susanne Kratzer (Palgruden), Sherwin Ladner (WaveCIS), Thomas Schroeder (Lucinda), Heidi M. Sosik (MVCO), Giuseppe Zibordi (Abu Al Bukhoosh,  Gloria, Gustav Dalen Tower, Helsinki Lighthouse and Venice)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SeaWiFS Bio-optical Archive and Storage System (SeaBASS)</oasis:entry>
         <oasis:entry colname="col2">Global archive of in situ marine data from multiple contributors. Bio-optical global data between 1997–2020 were extracted from the SeaBASS website. Pigment data were mostly extracted using “pigment search” tool, which provides data directly from the archives. Radiometric data were extracted using “validation” tool, which only provides in situ data with matchups for ocean colour sensors. Compiled standard variables: “rrs”, “chla_hplc”, “chl_fluor”, “aph”, “adg”, “bbp”, “kd”.</oasis:entry>
         <oasis:entry colname="col3">Robert Arnone, James Allen, Kevin Arrigo, Dirk Aurin, William Balch, Ray Barlow, Mike Behrenfeld, Sukru Besiktepe, Kelsey Bisson, Emmanuel Boss, Chris Brown, Dylan Catlett, Douglas Capone, Ken Carder, Carlos Del Castillo, Francisco Chavez, Alex Chekalyuk, Jay-Chung Chen, Dennis Clark, Herve Claustre, Lesley Clementson, Javier Concha, Jorge Corredor, Glenn Cota, Yves Dandonneau, Heidi Dierssen, David Eslinger, Piotr Flatau, Scott Freeman, Robert Frouin, Carlos Garcia, Alex Gilerson, Joaquim Goes, Gwo-Ching Gong, Adriana Gonzalez-Silvera, Rick Gould, Jason Graff, Nils Haentjens, Larry Harding, Jon Hare, Stanford B. Hooker, Chuanmin Hu, Milton Kampel, Sung-Ho Kang, Grace Kim, Gary Kirkpatrick, Oleg Kopelevich, Sasha Kramer, Sam Laney, Pierre Larouche, Jesus Ledesma, Zhongping Lee, Ricardo Letelier, Marlon Lewis, Steven Lohrenz, Mary Luz Canon, Antonio Mannino, Stephane Maritorena, John Marra, Chuck McClain, Christophe Menkes, Mark Miller, Allen Milligan, Greg Mitchell, Ru Morrison, James Mueller, Frank Muller-Karger, Ruben Negri, James Nelson, Norman Nelson, Michael Novak, Mary Jane Perry, David Phinney, John Porter, Collin Roesler, Joe Salisbury, David Siegel, Mike Sieracki, Jeffrey Smart, Raymond Smith, Heidi Sosik, James Spinhirne, Dariusz Stramski, Rick Stumpf, Ajit Subramaniam, Lynne Talley, Chuck Trees, Michael Twardowski, Ryan Vandermeulen, Kenneth Voss, Marcel Wernand, Toby Westberry, Ronald Zaneveld, Eric Zettler, Giuseppe Zibordi, Richard Zimmerman</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e2636">Continued.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.93}[.93]?><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="60pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="206pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="184pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Data source</oasis:entry>
         <oasis:entry colname="col2">Description</oasis:entry>
         <oasis:entry colname="col3">Data contributors</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">NASA bio-Optical Marine Algorithm Data set (NOMAD)</oasis:entry>
         <oasis:entry colname="col2">High-quality global data set of coincident bio-optical in situ data. The data set was built upon SeaBASS archive. The current version (Version 2.0 ALPHA, 2008) was used, with an additional set of columns of remote-sensing reflectance corrected for the bidirectional nature of the light field, provided by NOMAD creators. Data compiled between 1997–2007. Compiled standard variables: “rrs”, “chla_hplc”, “chl_fluor”, “aph”, “adg”, “bbp”, “kd”.</oasis:entry>
         <oasis:entry colname="col3">Robert Arnone, Kevin Arrigo, William Balch, Ray Barlow, Mike Behrenfeld, Chris Brown, Douglas Capone, Ken Carder, Francisco Chavez, Dennis Clark, Herve Claustre, Jorge Corredor, Glenn Cota, David Eslinger, Piotr Flatau, Robert Frouin, Rick Gould, Larry Harding, Stanford B. Hooker, Oleg Kopelevich, Marlon Lewis, Antonio Mannino, John Marra, Mark Miller, Greg Mitchell, Tiffany Moisan, Ru Morrison, Frank Muller-Karger, James Nelson, Norman Nelson, David Siegel, Raymond Smith, Timothy Smyth, James Spinhirne, Dariusz Stramski, Rick Stumpf, Ajit Subramaniam, Kenneth Voss</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MERIS Match-up In situ Database (MERMAID)</oasis:entry>
         <oasis:entry colname="col2">Global database of in situ bio-optical data matched with concurrent MERIS Level 2 satellite ocean colour products The “extract matchup” tool to acquire data was used. Data were compiled between 2002–2012. Access has been granted through a signed Service Level Agreement. Compiled standard variables: “rrs”, “chla_hplc”, “chl_fluor”, “aph”, “adg”, “bbp”, “kd”, and “tsm”.</oasis:entry>
         <oasis:entry colname="col3">Simon Belanger, Jean-Francois Berthon, Vanda Brotas, Elisabetta Canuti, Pierre Yves Deschamps, Annelies Hommersom, Mati Kahru, Holger Klein, Susanne Kratzer, Hubert Loisel, David McKee, Greg Mitchell, Michael Ondrusek, Michel Repecaud, David Siegel, Gavin Tilstone, Giuseppe Zibordi</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Atlantic Meridional Transect (AMT)</oasis:entry>
         <oasis:entry colname="col2">Multidisciplinary programme that makes biological, chemical, and physical oceanographic measurements during an annual voyage between the United Kingdom and destinations in the South Atlantic. It has compiled observations of chlorophyll-<inline-formula><mml:math id="M103" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration between 1997 (AMT5) and 2018 (AMT28). Data were provided by the British Oceanographic Data Centre (BODC) and directly from data contributors. Compiled standard variables: “chla_hplc”, “chl_fluor”.</oasis:entry>
         <oasis:entry colname="col3">Ruth Airs, Arwen Bargery, Ray Barlow, Robert J. W. Brewin, Denise Cummings, Giorgio Dall'Olmo, Ella Darlington, Afonso Ferreira, Stuart Gibb, Victoria Hill, Patrick Holligan, Victor Martinez-Vincente, Gerald Moore, Leonie O'Dowd, Alex Poulton, Emilio Suarez, Glen Tarran, Andreia Tracana, Rob Thomas, Gavin Tilstone</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">International Council for the Exploration of the Sea (ICES)</oasis:entry>
         <oasis:entry colname="col2">Database of several collections of data related to the marine environment. It has compiled observations of chlorophyll-<inline-formula><mml:math id="M104" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the northern European seas, between 1997–2012. Data were provided by the ICES database on the marine environment (2014, Copenhagen, Denmark). Compiled standard variables: “chla_hplc”, “chl_fluor”.</oasis:entry>
         <oasis:entry colname="col3">Not available</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Hawaii Ocean Time-series (HOT)</oasis:entry>
         <oasis:entry colname="col2">Multidisciplinary programme that makes repeated biological, chemical, and physical oceanographic observations near Oahu, Hawaii. Measurements of chlorophyll-<inline-formula><mml:math id="M105" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration between 1997–2019 were extracted from the project website. Compiled standard variables: “chla_hplc”, “chl_fluor”.</oasis:entry>
         <oasis:entry colname="col3">Bob Bidigare, Matthew Church, Ricardo Letelier, Jasmine Nahorniak</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Geochemistry, Phytoplankton, and Color of the Ocean (GeP&amp;CO)</oasis:entry>
         <oasis:entry colname="col2">Program of in situ data collection aboard merchant ship from France to New Caledonia, between 1999 and 2002. Measurements of chlorophyll-<inline-formula><mml:math id="M106" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration were obtained from the project website. Compiled standard variables: “chla_hplc”, “chla_fluor”.</oasis:entry>
         <oasis:entry colname="col3">Yves Dandonneau</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">ARCSSPP</oasis:entry>
         <oasis:entry colname="col2">“Arctic System Science Primary Production” database. Available from NODC FTP site. Compiled standard variable: “chla_fluor”.</oasis:entry>
         <oasis:entry colname="col3">Patricia Matrai</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">AWI</oasis:entry>
         <oasis:entry colname="col2">Several 2007–2018 cruises in Atlantic, Pacific, and Southern oceans from Astrid Bracher's group at AWI. Provided by Astrid Bracher. Available from PANGAEA. Compiled standard variables: “chla_fluor”, “rrs”, “aph”.</oasis:entry>
         <oasis:entry colname="col3">Astrid Bracher, Rüdiger Röttgers</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e2796">Continued.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.95}[.95]?><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="60pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="206pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="184pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Data source</oasis:entry>
         <oasis:entry colname="col2">Description</oasis:entry>
         <oasis:entry colname="col3">Data contributors</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">BARENTSSEA</oasis:entry>
         <oasis:entry colname="col2">Data collection from cruises of the Institute of Marine Research (Norway) mainly around the Barents Sea. Provided by Knut Yngve Børsheim. Compiled standard variable: “chla_fluor'.'</oasis:entry>
         <oasis:entry colname="col3">Knut Yngve Børsheim</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">BATS</oasis:entry>
         <oasis:entry colname="col2">Data collection from the “Bermuda Atlantic Time-series Study”. Available from BATS website. Compiled standard variables: “chla_ fluor”, “chla_hplc”.</oasis:entry>
         <oasis:entry colname="col3">Not available</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">BIOCHEM</oasis:entry>
         <oasis:entry colname="col2">The Fisheries and Oceans Canada database for biological and chemical data. Mostly data from Gulf of St. Lawrence. Available from BIOCHEM website. Compiled standard variable: “chla_fluor”.</oasis:entry>
         <oasis:entry colname="col3">Diane Archambault, Hughes Benoit, Esther Bonneau, Eugene Colbourne, Alain Gagne, Yves Gagnon, Tom Hurlbut, Catherine Johnson, Pierre Joly, Maurice Levasseur, Patrick Ouellet, Jacques Plourde, Luc Savoie, Michael Scarratt, Philippe Schwab, Michel Starr, François Villeneuve</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">BODC</oasis:entry>
         <oasis:entry colname="col2">“British Oceanographic Data Centre”. Mainly European Seas. Provided by BODC. Compiled standard variables: “chla_fluor”, “chla_ hplc”.</oasis:entry>
         <oasis:entry colname="col3">Not available</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">CALCOFI</oasis:entry>
         <oasis:entry colname="col2">Cruise data from the “California Cooperative Oceanic Fisheries Investigations” program. Available from CalCOFI website. Compiled standard variable: “chla_fluor”.</oasis:entry>
         <oasis:entry colname="col3">Ralf Goericke</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">CCELTER</oasis:entry>
         <oasis:entry colname="col2">Cruise data from “California Current Ecosystem Long Term Ecological Research”. Available from CCELTER website. Compiled standard variable: “chla_fluor”.</oasis:entry>
         <oasis:entry colname="col3">Ralf Goericke</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">CIMT</oasis:entry>
         <oasis:entry colname="col2">Sampling from the “Center for Integrated Marine Technology” (California). Available from CIMT website. Compiled standard variable: “chla_fluor”.</oasis:entry>
         <oasis:entry colname="col3">Raphael Kudela</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">COASTCOLOUR</oasis:entry>
         <oasis:entry colname="col2">Quality controlled compilation of bio-optical data in several coastal sites. Available from PANGAEA. Compiled standard variables: “chla_ fluor”, “chla_hplc”, “rrs”, “aph”, “adg”, “bbp”, “tsm”.</oasis:entry>
         <oasis:entry colname="col3">Not available</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">ESTOC</oasis:entry>
         <oasis:entry colname="col2">Sampling from the “Estación Europea de Series Temporales del Oceano” Canary Islands. Provided by Andrés Cianca. Compiled standard variable: “chla_fluor”.</oasis:entry>
         <oasis:entry colname="col3">Octavio Llinas and Andres Cianca</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">IMOS</oasis:entry>
         <oasis:entry colname="col2">Australian National Reference Stations – Phytoplankton HPLC Pigment Composition Analysis. Available from the Australian Ocean Data Network (AODN). Compiled standard variable: “chla_hplc”. <?xmltex \hack{\hfill\break}?>Bio-optical Database of Australian Waters. Available from the Australian Ocean Data Network (AODN). Compiled standard variables: “chla_hplc”, “chla_ fluor”</oasis:entry>
         <oasis:entry colname="col3">Lesley Clementson, Bozena Wojtasiewicz <?xmltex \hack{\hfill\break}?>Janet Anstee, Lesley Clementson, Joey Crosswell, Britta Schaffelke, Thomas Schroeder, Bernadette Sloyan, Paul Thomson and Tom Trull</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MAREDAT</oasis:entry>
         <oasis:entry colname="col2">Quality controlled global compilation of chla HPLC. Available from PANGAEA. Compiled standard variable: “chla_hplc”.</oasis:entry>
         <oasis:entry colname="col3">Ray Barlow, Robert Bidigare, Herve Claustre, Denise Cummings, Giacomo DiTullio, Chris Gallienne, Ralf Goericke, Patrick Holligan, David Karl, Michael Landry, Michael Lomas, Michael Lucas, Jean-Claude Marty, Walker Smith, Denise Smythe-Wright, Rick Stumpf, Emilio Suarez, Koji Suzuki, Maria Vernet, Simon Wright</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">PALMER</oasis:entry>
         <oasis:entry colname="col2">“Palmer station Long-term Ecological Research” (Antarctica). Available from PALMER website. Compiled standard variables: “chla_fluor”, “chla_hplc”.</oasis:entry>
         <oasis:entry colname="col3">Oscar Schofield, Raymond Smith, Maria Vernet</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SEADATANET</oasis:entry>
         <oasis:entry colname="col2">Global archive of in situ marine data. Available from SEADATANET website. Compiled standard variable: “chla_fluor”.</oasis:entry>
         <oasis:entry colname="col3">Not available</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T5" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e2993">Continued.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="60pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="206pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="184pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Data source</oasis:entry>
         <oasis:entry colname="col2">Description</oasis:entry>
         <oasis:entry colname="col3">Data contributors</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">TPSS</oasis:entry>
         <oasis:entry colname="col2">Compilation of bio-optical data predominantly from the Northwest Atlantic, but also from the Indian Ocean, South Pacific, and Central Atlantic. Provided by Trevor Platt and Shubha Sathyendranath. Compiled standard variables: “chla_hplc”, “chla_fluor”, “aph”.</oasis:entry>
         <oasis:entry colname="col3">Trevor Platt, Shubha Sathyendranath</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">TARA</oasis:entry>
         <oasis:entry colname="col2">Data collection from the TARA global transects. Provided by Emmanuel Boss. All data available in SeaBASS. Compiled standard variables: “chla_hplc”, “rrs”.</oasis:entry>
         <oasis:entry colname="col3">Emmanuel Boss</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e3050">Data processing thus included two major steps: pre-processing and merging.
The first step was related to the processing of each of the 27 contributing
data sets and aimed to identify problems and convert the data of interest to
a standard format. The second step dealt with the integration of all the
contributing sets of data into a unified data set and included the
elimination of duplicated data between the individual sets of data. In the
next subsections, a brief overview of each original set of data is provided.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Pre-processing of each set of data</title>
<sec id="Ch1.S2.SS2.SSS1">
  <label>2.2.1</label><title>Marine Optical BuoY (MOBY)</title>
      <p id="d1e3068">MOBY is a fixed mooring system operated by the National Oceanic and
Atmospheric Administration (NOAA) that provides a continuous time series of
water-leaving radiance and surface irradiance in the visible region of the
spectra since 1997. The site is located a few kilometres west of the
Hawaiian Island of Lanai where the water depth is about 1200 m. Since its
deployment, MOBY measurements have been the primary basis for the on-orbit
vicarious calibrations of the SeaWiFS and MODIS ocean colour sensors. A full
description of the MOBY system and processing is provided in Clark et al. (2003). Data are freely available for scientific use at the MOBY Gold
directory. The products of interest are the “scientific time series”
files, which refer to MOBY data averaged over sensor-specific wavelengths
and particular hours of the day (around 20:00–23:00 UTC). For this work, the
satellite band-average products for SeaWiFS, MODIS AQUA, MERIS, VIIRS-SNPP,
VIIRS-JPSS (also known as NOAA-20 VIIRS), OLCI-S3A, and OLCI-S3B were
compiled from the “R2017 reprocessing”. The “inband” average subproduct
was used, and to maintain the highest quality, only data determined from the
upper two arms (“Lw1”) and flagged “good” quality were acquired. Data from
the MOBY203 deployment were discarded due to the absence of surface
irradiance data. The compiled variable was the remote-sensing reflectance,
“rrs”, which was computed from the original water-leaving radiance
(“Lw”) and surface irradiance (“Es”). The water-leaving radiances were
corrected for the bidirectional nature of the light field (Morel and
Gentili, 1996; Morel et al., 2002) using the same lookup table and method
as that used in the SeaWiFS Data Analysis System (SeaDAS) processing code.
The MOBY data were reprocessed in 2017 (“MOBY R2017 reprocessing”) to
include various improvements in the calibration of the instrument and post-processing, which include: (1) a new method to extrapolate the upwelling
radiance attenuation coefficient to the surface (Voss et al., 2017); (2) an
increase in arm depth by 0.234 m; and (3) a single pixel shift in the data
for the red spectrograph collected at a bin factor of 384. Only the last two
changes were included in the present compilation. The first change uses model
results to improve Lw at wavelengths above 575 nm, by correcting the diffuse
upwelling radiance attenuation coefficient for inelastic effects. Thus for
wavelengths above 575 nm, the Lw21 product in the Gold directory should be
investigated. As mentioned before, the MOBY data compiled in this work are
sensor-specific. Therefore, attention is necessary to use the correct MOBY
data when validating a particular sensor. The way MOBY data are stored in
the final merged table is consistent with the original wavelengths; however,
these wavelengths can differ from what is sometimes expected to be the
central wavelength of a given band and sensor. Irrespective of the
wavelength where MOBY data are stored in the final table, for validation of
bands 1–6 of SeaWiFS, MOBY data stored in the final merged table at 412,
443, 490, 510, 555, and 670 nm, respectively, should be used. For validation
of bands 1–7 of MODIS AQUA, MOBY data stored in the final merged table at
416, 442, 489, 530, 547, 665, and 677 nm, respectively, should be used. For
validation of bands 1-10 of MERIS, MOBY data stored in the final merged
table at 410.5, 440.4, 487.8, 507.7, 557.6, 617.5, 662.4, 679.9, 706.2, and
752.5 nm, respectively, are the appropriate data. For validation of bands
1–12 of OLCI-S3A, MOBY data stored in the final merged table at 400.3032,
411.8453, 442.9626, 490.493, 510.4676, 560.4503, 620.4092, 665.2744,
674.0251, 681.5705, 709.1149, and 754.1813, respectively, are the appropriate
data. For validation of bands 1–12 of OLCI-S3B, MOBY data stored in the
final merged table at 400.5947, 411.9509, 442.9882, 490.3991, 510.4022,
560.3664, 620.284, 665.1312, 673.8682, 681.3856, 708.9821, and 754.0284,
respectively, are the appropriate data. For validation of bands 1–5 of
VIIRS-SNPP, MOBY data stored in the final merged table at 412.9, 444.5,
481.2, 556.3, and 674.6 nm, respectively, are the appropriate data. Finally,
for validation of bands 1–5 of VIIRS-JSPP, MOBY data stored in the final
merged table at 411, 445, 489.01, 556, and 667 nm, respectively, are the
appropriate data. For the latter sensor, the original value was 489 nm, but
it was changed to 489.01 nm to differentiate from the 489 nm of MODIS AQUA.
The lookup table to fully normalize “rrs” only covers the range 413–660 nm; compared to the previous versions of the compilation, in the present
version, the “rrs” MOBY at wavelengths outside this range were not
discarded and fully normalized using the closest entry of the lookup table
(i.e. at 413 or 660 nm).</p>
</sec>
<sec id="Ch1.S2.SS2.SSS2">
  <label>2.2.2</label><?xmltex \opttitle{BOU\'{e}e pour l'acquiSition de S\'{e}ries Optiques \`{a} Long termE
(BOUSSOLE)}?><title>BOUée pour l'acquiSition de Séries Optiques à Long termE
(BOUSSOLE)</title>
      <p id="d1e3080">BOUSSOLE project started in 2001 with the objective of establishing a time
series of bio-optical properties in oceanic waters to support the
calibration and validation of ocean colour satellite sensors (Antoine et
al., 2006). The project consists of a monthly cruise program and a permanent
optical mooring (Antoine et al., 2008). The mooring collects radiometry and
inherent optical properties (IOPs) in continuous mode every 15 min at two
depths (4 and 9 m nominally). The monthly cruises are devoted to the mooring
servicing, to the collection of vertical profiles of radiometry and IOPs,
and to water sampling at 11 depths from the surface down to 200 m, for
subsequent analyses including phytoplankton pigments, particulate
absorption, CDOM absorption, and suspended particulate matter load. The
BOUSSOLE mooring is in the western Mediterranean Sea at a water depth of
2400 m. All pigment (2001–2019) and radiometric (two subsets: 2003–2012 and
2015–2019) data were provided by the Principal Investigators. The first
radiometric subset was obtained from measurements made with multispectral
Satlantic OCI-200 radiometers; the second radiometric subset was obtained
from measurements made with hyperspectral Satlantic OCR radiometers,
convolved with spectral response function of Sentinel3 OLCI-A bands. The
compiled variables were “rrs” and “chla_hplc”.
Remote-sensing reflectance was computed from the original
“fully-normalized” water-leaving radiance (“nLw_ex”),
which is the “normalized” water-leaving radiance (“nLw” previously
described), with a correction for the bidirectional nature of the light
field (Morel and Gentili, 1996; Morel et al., 2002). The solar irradiance
(“Fo”) was computed from two available variables in the original set of
data: the normalized water-leaving radiance (“nLw”) and the remote-sensing
reflectance (“rrs”), using the equation “Fo <inline-formula><mml:math id="M107" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> nLw/rrs”. Only radiometric
observations that meet the following criteria were used: (1) tilt of the buoy
was less than 10<inline-formula><mml:math id="M108" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>; (2) the buoy was not lowered by more than 2 m
as compared to its nominal water line (to ensure the Es reference sensor is
above water and exempt from sea spray); and (3) the solar irradiance was
within 10 % of its theoretical clear-sky value (determined from Gregg and
Carder, 1990). The latter criterion was used to select clear skies only. An
additional quality control was to remove observations that were 50 %
higher or lower than the daily average. This removed a small number of
“spikes” in the time series. The final quality control step was to remove
days where the standard deviation was more than half of the daily average.
This was meant to identify days with high variability. Very few days (<inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:mi>N</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula>) were removed with this test. These quality control criteria were applied
per wavelength, which resulted in some observations with an incomplete
spectrum.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS3">
  <label>2.2.3</label><title>AErosol RObotic NETwork-Ocean Color (AERONET-OC)</title>
      <p id="d1e3119">AERONET-OC is a component of AERONET, including sites where sun photometers
operate with a modified measurement protocol leading to the determination of
the fully-normalized water-leaving radiance (Zibordi et al., 2006, 2009). As a result of a collaboration between the Joint Research
Centre (JRC) and NASA to develop (Hooker et al., 2000) and exploit (Zibordi
et al., 2002) the technology, this component has been specifically developed
for the validation of ocean colour radiometric products. The strength of
AERONET-OC is “the production of standardized measurements that are
performed at different sites with identical measuring systems and protocols,
calibrated using a single reference source and method, and processed with
the same codes” (Zibordi et al., 2006, 2009). All high
quality data (“Level-2”) were acquired from the project website for 11
sites: Abu_Al_Bukhoosh (<inline-formula><mml:math id="M110" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">25</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M111" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">53</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M113" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E), COVE_SEAPRISM (<inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">36</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M115" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">75</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M117" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W),
Gloria (<inline-formula><mml:math id="M118" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">44</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M119" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M120" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">29</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M121" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E),
Gustav_Dalen_Tower (<inline-formula><mml:math id="M122" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">58</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M123" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">17</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M125" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E), Helsinki Lighthouse
(<inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">59</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M127" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M128" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">24</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M129" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E), LISCO
(<inline-formula><mml:math id="M130" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M131" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">73</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M133" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W), Lucinda
(<inline-formula><mml:math id="M134" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">18</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M135" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S, <inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">146</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M137" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E), MVCO
(<inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">41</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M139" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M140" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">70</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M141" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W),
Palgrunden (<inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">58</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M143" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">13</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M145" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E; Philipson et al., 2016), Venice (<inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">45</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M147" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N,
<inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M149" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E), and WaveCIS_Site_ CSI_6 (<inline-formula><mml:math id="M150" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">28</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M151" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N,
<inline-formula><mml:math id="M152" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">90</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M153" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W). The compiled variable was “rrs”.
Remote-sensing reflectance was computed from the original
“fully-normalized” water-leaving radiance (see Sect. 2.2.2 for
definition). The solar irradiance (“Fo”), which is not part of the
AERONET-OC data, was computed from the Thuillier et al. (2003) solar spectrum
irradiance by averaging “Fo” over a wavelength-centred 10 nm window. Data
were compiled for the exact wavelengths of each record, which can change
over time for a given site depending on the specific instrument deployed. In
comparison with the previous version of the compilation, the present OC-CCI
data set version 3, now uses the “version 3” reprocessing of AERONET-OC
data (Zibordi et al., 2021).</p>
</sec>
<sec id="Ch1.S2.SS2.SSS4">
  <label>2.2.4</label><title>SeaWiFS Bio-optical Archive and Storage System (SeaBASS)</title>
      <p id="d1e3531">SeaBASS is one of the largest archives of in situ marine bio-optical data
(Werdell et al., 2003) with a long-established inventory (Hooker et al.,
1994). It is maintained by NASA's Ocean Biology Processing Group (OBPG) and
includes measurements of optical properties, phytoplankton pigment
concentrations, and other related oceanographic and atmospheric data. The
SeaBASS database consists of in situ data from multiple contributors,
collected using a variety of measurement instruments with consistent,
community-vetted protocols, from several marine platforms such as fixed
buoys, handheld radiometers, and profiling instruments. Quality control of
the received data includes a rigorous series of protocols that range from
file format verification to inspection of the geophysical data values
(Werdell et al., 2003). Radiometric data were mostly acquired through
the “validation” search tool, which provided in situ data with matchups for
particular ocean colour sensors (Bailey and Werdell, 2006). The criterion in
the search–query was defined to have the minimal flag conditions in the
satellite data, to retrieve a greater number of matchups, and therefore in
situ data. Regarding phytoplankton pigment data, the majority were acquired
through the “pigment” search tool, which provided pigment data directly from
the archives. As was stated in the SeaBASS website, the “pigment” search
tool was originally designed to return only in vitro fluorometric
measurements, which is consistent with our approach, but over time
chlorophyll-<inline-formula><mml:math id="M154" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> measurements made using other methods (e.g. in vivo
fluorometry) were included in the retrieved pigment data. In the pigment
data used in this work, a large number of in situ fluorometric measurements
from continuous underway instruments were identified and discarded. These
data were initially identified from cruises with more than 50 observations
per day and then re-checked in the SeaBASS website to confirm whether
indeed they were continuous underway measurements. A total of 120 412 such
measurements were identified and discarded. Given the large volume of this
group of data, it is possible that some chlorophyll-<inline-formula><mml:math id="M155" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> observations from in
vivo methods may have escaped the scrutiny and persisted into the final
merged data set. The “pigment” search tool was recently discontinued, and
instead the “file” search tool can be used, which was also used here to
acquire chlorophyll, as well as radiometric observations, for more recent
years. The remote sensing reflectance acquired from the “file” search tool
was corrected for the bidirectional effects (Morel and Gentili, 1996; Morel
et al., 2002). The compiled variables from SeaBASS data were “rrs”,
“chla_hplc”, “chla_fluor”, “aph”,
“adg”, “bbp”, and “kd”.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS5">
  <label>2.2.5</label><title>NASA bio-Optical Marine Algorithm Data set (NOMAD)</title>
      <p id="d1e3557">NOMAD is a publicly-available data set compiled by the NASA OBPG at the
Goddard Space Flight Center. It is a high-quality global data set of
coincident radiometric and phytoplankton pigment observations for use in
ocean colour algorithm development and satellite-data product-validation
activities (Werdell and Bailey, 2005). The source bio-optical data is the
SeaBASS archive; therefore, many dependencies exist between these two data
sets, which were addressed during the merging. The current version (Version
2.0 ALPHA, 2008) includes data from 1991 to 2007 and an additional set of
observations of inherent optical properties. The current version was used in
this work, but with an additional set of columns of remote-sensing
reflectance corrected for the bidirectional effects (Morel and Gentili,
1996; Morel et al., 2002). This additional set of columns was provided
directly by the NOMAD creators. The compiled variables were “rrs”,
“chla_hplc”, “chla_fluor”, “aph”,
“adg”, “bbp”, and “kd”. Conversion was necessary only for “aph”, “adg”,
and “bbp”, and followed the procedures described in Sect. 2.1. For the
calculation of “bbp”, the variable “bb” was used with a smooth fitting to
remove noise. A portion of NOMAD data were optically weighted (for methods
see Werdell and Bailey, 2005). These data are not consistent with the
protocols chosen in this work, but these observations were retained since
NOMAD is a widely-used data set in ocean colour validation.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS6">
  <label>2.2.6</label><title>MERIS Match-up In situ Database (MERMAID)</title>
      <p id="d1e3568">MERMAID provides in situ bio-optical data matched with concurrent and
comparable MERIS Level 2 satellite ocean colour products (Barker, 2013a, b). The MERMAID in situ database consists of data from multiple
contributors, measured using a variety of instruments and protocols, from
several marine platforms such as fixed buoys, handheld radiometers, and
profiling instruments. Comprehensive quality control and protocols are used
by MERMAID to integrate all the data into a common and comparable format
(Barker, 2013a, b). Access to MERMAID data is limited to the
MERIS Validation Team, the MERIS Quality Working Group, and to the in situ
data contributors. For this work, access has been granted to the MERMAID
database through a signed Service Level Agreement. The MERMAID data
include sub-sets of several data sets used in this compilation (MOBY,
AERONET-OC, BOUSSOLE, NOMAD). These observations were removed from the
MERMAID data set to avoid duplication (as discussed in Sect. 2.1). The
compiled variables were “rrs”, “chla_hplc”,
“chla_fluor”, “aph”, “adg”, “bbp”, “kd”, and
“tsm”. Remote-sensing reflectance was calculated by dividing by <inline-formula><mml:math id="M156" display="inline"><mml:mi mathvariant="italic">π</mml:mi></mml:math></inline-formula> the
original “fully-normalized” water-leaving reflectance (“Rw_ex”), which is the water-leaving reflectance (Rw <inline-formula><mml:math id="M157" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:mi mathvariant="italic">π</mml:mi></mml:mrow></mml:math></inline-formula> Lw <inline-formula><mml:math id="M158" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Es), with a
correction for the bidirectional nature of the light field (Morel and
Gentili, 1996; Morel et al., 2002). Conversion was also necessary for
“aph”, “adg”, and “bbp” and followed the procedures described in Sect. 2.1.</p>
      <p id="d1e3595">In comparison with the previous version of the compilation, a set of
“chla_fluor” observations from MERMAID were considered
suspicious and excluded from the compilation (<inline-formula><mml:math id="M159" display="inline"><mml:mrow><mml:mi>N</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3241</mml:mn></mml:mrow></mml:math></inline-formula>, from
mermaid_MAREL-carnot, mermaid_MAREL-itroise,
and mermaid_MAREL-vilaine).</p>
</sec>
<sec id="Ch1.S2.SS2.SSS7">
  <label>2.2.7</label><title>Hawaii Ocean Time-series (HOT)</title>
      <p id="d1e3618">HOT programme provides repeated comprehensive observations of the
hydrography, chemistry, and biology of the water column at a station located
100 km north of Oahu, Hawaii, since October 1988 (Karl and Michaels, 1996).
This site is representative of the North Pacific subtropical gyre. Cruises
are made approximately once a month to the deep-water Station ALOHA (A
Long-Term Oligotrophic Habitat Assessment; 22<inline-formula><mml:math id="M160" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>45<inline-formula><mml:math id="M161" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula> N,
158<inline-formula><mml:math id="M162" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>00<inline-formula><mml:math id="M163" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula> W). Pigment data (“chla_hplc” and
“chla_fluor”) were extracted directly from the project
website. Radiometric measurements from the HOT project are also available,
but observations of “rrs” and “kd” from the HOT project were acquired in
this work as part of the SeaBASS data set.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS8">
  <label>2.2.8</label><?xmltex \opttitle{Geochemistry, Phytoplankton, and Color of the Ocean (GeP{\&}CO)}?><title>Geochemistry, Phytoplankton, and Color of the Ocean (GeP&amp;CO)</title>
      <p id="d1e3666">GeP&amp;CO is part of the French PROOF programme and aims to describe and
understand the variability of phytoplankton populations and to assess its
consequences on the geochemistry of the oceans (Dandonneau and Niang, 2007).
It is based on the quarterly travels of the merchant ship Contship London
from France to New Caledonia in the Pacific. A scientific observer sailed on
each trip and operated the sampling for surface water, filtration, various
measurements, and checking at several times of each day. The experiment
started in October 1999 and finished in July 2002. Pigment data were
extracted from the project website. Additional pigment data obtained during
the OISO-4 cruise in the south Indian Ocean onboard R/V <italic>Marion-Dufresne</italic>
(January–February 2000) were added. The samples were measured by Yves Dandonneau
following the method used in the GeP&amp;CO project. The compiled variable
was “chla_hplc” and “chla_fluor”.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS9">
  <label>2.2.9</label><title>Atlantic Meridional Transect (AMT)</title>
      <p id="d1e3680">AMT is a multidisciplinary programme which undertakes biological, chemical,
and physical oceanographic research during transects between the UK and
destinations in the South Atlantic (Robinson et al., 2006). The programme
was established in 1995 (e.g. Robins et al., 1996; Aiken et al., 1998) and
since then has completed 29 research cruises. Pigment data between 1997
(AMT5) and 2018 (AMT28) were mostly provided by the British Oceanographic
Data Centre (BODC) following a specific request for discrete observations of
chlorophyll-<inline-formula><mml:math id="M164" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration since 1997. The AMT data were isolated by
searching for the string “AMT” in the “cruise” columns and the
respective Principal Investigators were then searched individually in a
separated metadata file. Data not flagged with highest quality or without
method of measurement were not used. For any interest in the original data,
BODC is the point of contact, which ensures that if there are any updates,
the most recent data are supplied. In the case of AMT 26, 27, and 28, data
were provided to the OC-CCI project by Gavin Tilstone, whereas in the case
of AMT 20 and 23, data were provided by Robert J. W. Brewin. The compiled
variables are “chla_hplc” and “chla_fluor”.
<?xmltex \hack{\newpage}?></p>
</sec>
<sec id="Ch1.S2.SS2.SSS10">
  <label>2.2.10</label><title>International Council for the Exploration of the Sea (ICES)</title>
      <p id="d1e3699">ICES is a network of more than 4000 scientists from almost 300 institutes,
with 1600 scientists participating in activities annually. The ICES Data
Centre manages a number of large data set collections related to the marine
environment covering the Northeast Atlantic, Baltic Sea, Greenland Sea, and
Norwegian Sea. Most of data originate from national institutes that are part
of the ICES network of member countries. Data were provided (on 28 April 2014)
from the ICES database on the marine environment (Copenhagen, Denmark)
following a specific request. The ICES data were made available under the
ICES data policy, and if there is any conflict between this and the policy
adopted by the users, then the ICES policy applies. The compiled variables
were “chla_hplc” and “chla_fluor”.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS11">
  <label>2.2.11</label><title>Arctic System Science Primary Production (ARCSSPP)</title>
      <p id="d1e3711">ARCSSPP database is a synthesis of observations between 1954 and 2006 from
the Arctic Ocean and northern seas (Matrai et al., 2013). The observations
were acquired from data repositories, publications or provided by individual
investigators. The database includes quality-controlled observations of
productivity and chlorophyll-<inline-formula><mml:math id="M165" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, photosynthetically available radiation, and
hydrographic parameters. This collection of data was acquired at
<uri>http://www.nodc.noaa.gov/cgi-bin/OAS/prd/accession/download/63065</uri> (last access: 18 December 2022). For the
present work, only observations of chlorophyll-<inline-formula><mml:math id="M166" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration with known
time zones were used. The compiled chlorophyll observations were from
discrete samples, but the exact method (either “chla_fluor”
or “chla_hplc”) was not available for all observations.
Thus, the ARCSSPP chlorophyll observations were marked as
“chla_fluor”, although some might have been from HPLC
measurements and were flagged with “1” in a column “flag_chla_method”. The compiled variable was “chla_fluor”.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS12">
  <label>2.2.12</label><title>Data provided by Astrid Bracher, Alfred-Wegener-Institute Helmholtz
Centre for Polar and Marine Research (AWI)</title>
      <p id="d1e3739">In this work, the AWI data source refers to the group of observations that
were provided to the OC-CCI project by Astrid Bracher. These are bio-optical
observations collected during several cruises across the globe. All data
were available through the PANGAEA repository. Observations of concentration
of chlorophyll-<inline-formula><mml:math id="M167" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, 1 nm spectrally resolved remote sensing reflectances,
and algal pigment absorption coefficient were considered. The methods for
these observations are described by Taylor et al. (2011a), Liu et al. (2018a),
and Tilstone et al. (2020). For chlorophyll, data from the following cruises were used: ANT-XXIV/1, ANT-XXIV/4, ANT-XXVI/4, and MSM18/3 (Bracher et al., 2015a); SO202/2 (Zindler et al., 2013a); ANT-XXVII/2 (Bracher, 2015); ANT-XXV/1 (Taylor et al., 2011b); ANT-XXVIII/3 and SO218 (Soppa et al., 2014); ANT23-1 (Bracher et al., 2015b); MSM9-1 (Bracher et al., 2017); M91 (Hepach et al., 2016); SO234+235 (Bracher et al., 2019); SO243 (Bracher, 2019a); PS93.2 (Liu et al., 2018b); HE462 (Bracher and Wiegmann, 2019); PS99.1 (Liu et al., 2019a); PS99.2 (Liu et al., 2018c); PS103 (Bracher, 2019b); PS107 (Liu et al., 2018d); and PS113 (Bracher et al., 2020). Concerning remote sensing reﬂectances, the observations taken during cruises ANT-XXIV/4 and ANT-XXVI/4 (Bracher et al., 2015a), ANT-XXV/1 (Taylor et al., 2011b), and ARK26-3 (Bracher et al., 2018) were gathered. The remote sensing reﬂectances were corrected for the bidirectional nature of the light ﬁeld (Morel and Gentili, 1996; Morel et al., 2002). The absorption coefﬁcients were taken during cruises SO202/2 (Zindler et al., 2013), ANT_XXV/1 (Taylor et al., 2011b), ANT-XXVI/3 and ANT-XXVIII/3 (Soppa et al., 2013), ARK26-3 (Gonçalves-Araujo et al., 2018), PS93.2 (Wiegmann et al., 2019), PS99.2 (Liu et al., 2019b), and PS107 (Liu et al., 2019c). The compiled variables were “chla_hplc”, “rrs”, and “aph”.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS13">
  <label>2.2.13</label><title>Bermuda Atlantic Time-series Study (BATS)</title>
      <p id="d1e3757">BATS is a long-term study by the Bermuda Institute of Ocean Sciences based
on regular cruises in the western Atlantic Ocean (Sargasso Sea) since 1988.
The cruises at BATS site (<inline-formula><mml:math id="M168" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">31</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M169" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>40<inline-formula><mml:math id="M170" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula> N,
64<inline-formula><mml:math id="M171" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>10<inline-formula><mml:math id="M172" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula> W) sample ocean temperature and salinity, but are
focused on biogeochemical variables such as nutrients, dissolved inorganic
carbon, oxygen, HPLC of pigments, primary production, and sediment trap flux.
In this work, all the phytoplankton pigment data available from the BATS
website (<uri>http://bats.bios.edu/bats-data/</uri>, last access: 18 December 2022) were considered, which also
included regional and transect cruises not specific to the nominal BATS
site. The compiled variables were “chla_hplc” and
“chla_fluor”.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS14">
  <label>2.2.14</label><?xmltex \opttitle{Data provided by Knut Yngve B{\o}rsheim (BARENTSSEA)}?><title>Data provided by Knut Yngve Børsheim (BARENTSSEA)</title>
      <p id="d1e3817">The BARENTSSEA data source refers to a group of observations that were
provided to OC-CCI project by Knut Yngve Børsheim. This collection was
developed using data from the archives of the Institute of Marine Research
(Norway). It comprises observations of temperature, salinity and
chlorophyll-<inline-formula><mml:math id="M173" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> routinely collected by cruises, mainly in the North Sea, the
Norwegian Sea, and the Barents Sea between 1997 and 2013. The chlorophyll-<inline-formula><mml:math id="M174" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration was measured by filtering and extraction using Turner
fluorometers. The compiled variable was “chla_fluor”.
<?xmltex \hack{\newpage}?></p>
</sec>
<sec id="Ch1.S2.SS2.SSS15">
  <label>2.2.15</label><title>The Fisheries and Oceans Canada database for biological and chemical
data (BIOCHEM)</title>
      <p id="d1e3843">BioChem is an archive of marine biological and chemical data maintained by
Fisheries and Oceans Canada (DFO, 2018; Devine et al., 2014). The available
observations are from department research initiatives and collected in areas
of Canadian interest. Available parameters include pH, nutrients,
chlorophyll, dissolved oxygen, and other plankton data (species and biomass).
Chlorophyll measurements from in vitro fluorometric methods were acquired
(from <uri>http://www.dfo-mpo.gc.ca/science/data-donnees/biochem/index-eng.html</uri>, last access: 18 December 2022)
with close guidance by the BioChem helpdesk, confirming quality and methods.
The used data span from 1997 to 2014 and were mainly from the Gulf of St.
Lawrence (western North Atlantic). The compiled variable was
“chla_fluor”.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS16">
  <label>2.2.16</label><title>British Oceanographic Data Centre (BODC)</title>
      <p id="d1e3857">BODC is the designated marine science data centre for the United Kingdom.
The data used in this work derive from a specific request for discrete
observations of chlorophyll-<inline-formula><mml:math id="M175" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration since 1997. Initially, this
request was used to compile AMT data (see Sect. 2.2.9). The remaining data
comprising observations of chlorophyll-<inline-formula><mml:math id="M176" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration from fluorometric and
HPLC methods, mostly sampled in the North Atlantic, were analysed and added
(the “dataset” string for this data source is “bodc”). Data not flagged
with highest quality or without method of measurement were discarded. The
compiled variables were “chla_hplc” and “chla_fluor”.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS17">
  <label>2.2.17</label><title>California Cooperative Oceanic Fisheries Investigations (CALCOFI)</title>
      <p id="d1e3883">CalCOFI is a partnership of the California Department of Fish &amp; Wildlife,
National Oceanic &amp; Atmospheric Administration Fisheries Service, and
Scripps Institution of Oceanography. CalCOFI has conducted quarterly cruises
off southern and central California since 1949. Data collected in the upper
500 m include temperature, salinity, oxygen, nutrients, chlorophyll,
primary productivity, plankton biodiversity, and biomass. For this work,
only observations of chlorophyll-<inline-formula><mml:math id="M177" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration derived from fluorometric
methods flagged with highest quality were used. Data were acquired from the
file “CalCOFI_Database_194903-201911_csv_10Jul2020.zip”. The
compiled variable was “chla_fluor”.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><?xmltex \currentcnt{1}?><?xmltex \def\figurename{Figure}?><label>Figure 1</label><caption><p id="d1e3895">Relative spectral frequency of remote-sensing reflectance in the
final table, using 10 nm wide class intervals, defined as the ratio of the
number of observations at a particular waveband to the total number of
observations at all wavebands, multiplied by 100 to report results in
percentage. Data at a total of 951 unique wavelengths, between 313 and
1022.1 nm, were compiled.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f01.png"/>

          </fig>

</sec>
<sec id="Ch1.S2.SS2.SSS18">
  <label>2.2.18</label><title>California Current Ecosystem Long-Term Ecological Research (CCELTER)</title>
      <p id="d1e3912">CCELTER investigates the California Current coastal pelagic ecosystem, with
a focus on long-term forcing. The CCELTER data include primary and derived
measurements from both Process and CalCOFI-augmented cruises, as well other
time series. CCELTER data include variables from the physical environment,
biogeochemistry, and biological populations/communities. For this work,
chlorophyll observations measured from discrete bottle samples from CCELTER
Process cruises determined by extraction and bench fluorometry
(California Current Ecosystem LTER and Goericke, 2020) were used. The compiled
variable was “chla_fluor”.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><?xmltex \currentcnt{2}?><?xmltex \def\figurename{Figure}?><label>Figure 2</label><caption><p id="d1e3917">The distribution of <bold>(a)</bold> “rrs” at <inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:mn mathvariant="normal">44</mml:mn><mml:mi>X</mml:mi></mml:mrow></mml:math></inline-formula> nm and <bold>(b)</bold> “rrs” at <inline-formula><mml:math id="M179" display="inline"><mml:mrow><mml:mn mathvariant="normal">55</mml:mn><mml:mi>X</mml:mi></mml:mrow></mml:math></inline-formula> nm. Data were first searched at 445 and 555 nm, and then with a search
window of up to 8 nm, to include data at 547 nm. The black boxes delimit the
percentiles 0.25 and 0.75 of the data and the black horizontal lines show
the extension of up to percentiles 0.05 and 0.95. The red line represents
the median value and the black circles the values below (and above) the
percentile 0.05 (0.95). The number of measurements of each data set is
reported on the right axis of the graph.</p></caption>
            <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f02.png"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><?xmltex \currentcnt{3}?><?xmltex \def\figurename{Figure}?><label>Figure 3</label><caption><p id="d1e3954">Temporal distribution of chlorophyll-<inline-formula><mml:math id="M180" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration (“chl”),
remote-sensing reflectance (“rrs”), algal pigment absorption coefficient
(“aph”), detrital plus CDOM absorption coefficient (“adg”), particle
backscattering coefficient (“bbp”), the diffuse attenuation coefficient
for downward irradiance (“kd”), and total suspended matter (“tsm”) in the
final table. All chlorophyll data were considered, but for a given station,
HPLC data were selected if available. Colours indicate the number of
stations available for each variable as a function of month and hemisphere
of data acquisition (“N” – Northern Hemisphere; “S” – Southern
Hemisphere). The empty (white) squares indicate no data for that month.</p></caption>
            <?xmltex \igopts{width=184.942913pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f03.png"/>

          </fig>

</sec>
<sec id="Ch1.S2.SS2.SSS19">
  <label>2.2.19</label><title>Center for Integrated Marine Technologies (CIMT)</title>
      <p id="d1e3978">CIMT was a non-operational program where marine scientists from different
disciplines and institutions combine their efforts on observations directed
towards understanding the central California upwelling system. The CIMT
archived data include coastal ocean observations from satellites, shipboard
data, moorings, and large marine animal movements. For this work, pigment
data from discrete bottle samples taken during CIMT monthly cruises were
used. Data were acquired from the project website
(<uri>https://cimt.ucsc.edu/data_portal.htm</uri>, last access: 18 December 2022). The compiled
variable was “chla_fluor”.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS20">
  <label>2.2.20</label><title>CoastColour Round Robin (COASTCOLOUR)</title>
      <p id="d1e3992">COASTCOLOUR data sets were designed to evaluate the performance of ocean
colour satellite algorithms in the retrieval of water quality parameters in
coastal waters (Nechad et al., 2015a). Three types of COASTCOLOUR data sets
are available: (1) a match-up data set where in situ bio-optical observations
are available simultaneously with a cloud-free MERIS product; (2) an in situ
reflectance data set where an in situ reflectance is available
simultaneously with an in situ measurement of chlorophyll-<inline-formula><mml:math id="M181" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration
and/or total suspended matter; and (3) a simulated data set where
reflectances were generated by a radiative transfer model. This work used
the match-up data set, which includes most of the in situ measurements, and
is available at <ext-link xlink:href="https://doi.org/10.1594/PANGAEA.841950" ext-link-type="DOI">10.1594/PANGAEA.841950</ext-link> (Nechad et al., 2015b). The match-up
data set provides optical, biogeochemical, and physical data collections at
17 sites across the globe. From this data set, observations of reflectance,
chlorophyll-<inline-formula><mml:math id="M182" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, total suspended matter, and IOPs were compiled. The remote
sensing reflectances were corrected for the bidirectional nature of the
light field (Morel and Gentili, 1996; Morel et al., 2002). The compiled
variables were “rrs”, “chla_hplc”, “chla_fluor”, “aph”, “adg”, “bbp”, and “tsm”.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS21">
  <label>2.2.21</label><title>European Station for Time series in the Ocean, Canary Islands (ESTOC)</title>
      <p id="d1e4020">ESTOC is an open-ocean monitoring site located in the eastern North Atlantic
subtropical gyre. ESTOC was initiated in 1991 with particle flux
measurements, and in 1994 began standard observations of the water column,
in addition to the deployment of a current meter mooring. The core
parameters measured at ESTOC include salinity, temperature, current speed,
nutrients, chlorophyll, inorganic carbon, particulate organic carbon and
nitrogen, and sinking particle flux (Neuer et al., 2007). For this work,
measurements of chlorophyll-<inline-formula><mml:math id="M183" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration from monthly cruises from 1994
to 2011 were used. These data were provided to CCI following a specific
request. The time of day was unavailable and was set to 12:00:00 (UTC).
These observations were flagged with “1” in column “flag_time”. The compiled variable was “chla_fluor”.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><?xmltex \currentcnt{4}?><?xmltex \def\figurename{Figure}?><label>Figure 4</label><caption><p id="d1e4032">Ranges of remote-sensing reflectance band ratios (<inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:mn mathvariant="normal">412</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">443</mml:mn></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:mn mathvariant="normal">490</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">555</mml:mn></mml:mrow></mml:math></inline-formula>) for all data. The points from the NOMAD data set are shown in blue
for reference. To maximize the number of ratios per data set, a search window
up to 12 nm was used when the four wavelengths (412, 443, 490, 555) were
not simultaneously available. The effect of different search windows was
negligible in the ratio distribution.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f04.png"/>

          </fig>

</sec>
<sec id="Ch1.S2.SS2.SSS22">
  <label>2.2.22</label><title>Australia's Integrated Marine Observing System (IMOS)</title>
      <p id="d1e4073">IMOS is enabled by Australia's National Collaborative Research
Infrastructure Strategy (NCRIS) funded by Australian Government. Since 2006,
IMOS is operating a wide range of observing equipment throughout the coastal
and open ocean around Australia, making all data openly available to the
scientific community, other stakeholders, and users. In this work, the IMOS
data contribution refers to two data sets. One is a data collection entitled
“IMOS National Reference Station (NRS) – Phytoplankton HPLC Pigment
Composition Analysis”, which was acquired from the Australian Ocean Data
Network portal (<uri>https://portal.aodn.org.au</uri>, last access: 18 December 2022). This data set comprises of
phytoplankton pigment composition measured by HPLC collected with small
vessels on monthly basis at nine National Reference Stations as part of the
IMOS National Mooring Network. The other chlorophyll-<inline-formula><mml:math id="M186" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> data set measured by
HPLC and fluorometry methods is a subset (2015–2021) of the IMOS
Bio-optical Database also available through the AODN portal. This database
comprises of a suite of bio-optical parameters from samples collected during
research voyages in Australian waters and is used by the IMOS Ocean Colour
Sub-Facility to assess the accuracy of satellite ocean colour products in
Australian coastal and open ocean waters (Schroeder et al., 2016). The
previous data compilations include an earlier subset of HPLC chlorophyll-<inline-formula><mml:math id="M187" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration from the IMOS Bio-optical Database that was acquired through
the SeaBASS archive. These data can be found under “dataset” string
“seabass” and Lesley Clementson as data contributor. The compiled
variables for IMOS were “chla_hplc” and
“chla_fluor”.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><?xmltex \def\figurename{Figure}?><label>Figure 5</label><caption><p id="d1e4095">Global distribution of remote-sensing reflectance per data set in
the final table. The data sources are identified with different colours.
Points show locations where at least one observation is available. Crosses
show sites from where time series data of remote-sensing reflectance are
available.</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f05.png"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><?xmltex \currentcnt{6}?><?xmltex \def\figurename{Figure}?><label>Figure 6</label><caption><p id="d1e4106">Comparison of coincident observations of chlorophyll-<inline-formula><mml:math id="M188" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration derived with different methods (“chla_fluor”
and “chla_hplc”). The data were transformed prior to
regression analysis to account for their log-normal distribution.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f06.png"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><?xmltex \currentcnt{7}?><?xmltex \def\figurename{Figure}?><label>Figure 7</label><caption><p id="d1e4125">Number of observations per chlorophyll-<inline-formula><mml:math id="M189" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration acquired
with different methods (“chla_fluor” and
“chla_hplc”).</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f07.png"/>

          </fig>

</sec>
<sec id="Ch1.S2.SS2.SSS23">
  <label>2.2.23</label><title>MARineEcosytem DATa (MAREDAT)</title>
      <p id="d1e4150">MAREDAT database is a global assemblage of pigments measured by HPLC
(Peloquin et al., 2013a) from combination of 136 independent field data sets,
solicited from investigators and databases. The database provides high
quality measurements of taxonomic pigments including chlorophyll <inline-formula><mml:math id="M190" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M191" display="inline"><mml:mi>b</mml:mi></mml:math></inline-formula>,
19'-butanoyloxyfucoxanthin, 19'-hexanoyloxyfucoxanthin, alloxanthin, divinyl
chlorophyll-<inline-formula><mml:math id="M192" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, fucoxanthin, lutein, peridinin, prasinoxanthin, violaxanthin,
and zeaxanthin. The database is available through PANGAEA
(<ext-link xlink:href="https://doi.org/10.1594/PANGAEA.793246" ext-link-type="DOI">10.1594/PANGAEA.793246</ext-link>, Peloquin et al., 2013b). For this work, only
measurements of total chlorophyll-<inline-formula><mml:math id="M193" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> flagged with high quality were used. The
time of day was unavailable and was set to 12:00:00 (UTC). These
observations were flagged with “1” in column “flag_time”.
The compiled variable was “chla_hplc”.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS24">
  <label>2.2.24</label><title>Palmer Station Long-term Ecological Research (PALMER)</title>
      <p id="d1e4192">PALMER is a monitoring station located in western Antarctic Peninsula. The
Palmer station investigates the marine ecology of the Southern Ocean with
focus on the pelagic marine ecosystem, including sea ice habitats, regional
oceanography, and nesting sites of seabird predators. The PALMER data include
measurements of meteorological, oceanographic, sea ice, predators, nutrients
and biogeochemistry, pigments, primary production, zooplankton, and microbes
parameters. This work used the measurements of chlorophyll analysed by HPLC
and fluorometry taken at the Palmer Station
(Palmer Station Antarctica LTER et al., 2020a, b) and from the annual
cruises off the coast of the Western Antarctica Peninsula
(Palmer Station Antarctica LTER et al., 2018, 2020c). The compiled variables
were “chla_hplc”, “chla_fluor”.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><?xmltex \currentcnt{8}?><?xmltex \def\figurename{Figure}?><label>Figure 8</label><caption><p id="d1e4197">Global distribution of chlorophyll-<inline-formula><mml:math id="M194" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration per interval of
the observed value. All chlorophyll data were considered, but for a given
station, HPLC data were selected if available.</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f08.png"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><?xmltex \currentcnt{9}?><?xmltex \def\figurename{Figure}?><label>Figure 9</label><caption><p id="d1e4215">Global distribution of chlorophyll-<inline-formula><mml:math id="M195" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration per data set in
the final table. All chlorophyll data were considered, but for a given
station, HPLC data were selected if available. Crosses show sites from where
data of chlorophyll are available in a specific geographic location.</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f09.png"/>

          </fig>

</sec>
<sec id="Ch1.S2.SS2.SSS25">
  <label>2.2.25</label><title>SeaDataNet archive (SEADATANET)</title>
      <p id="d1e4239">SeaDataNet is a Pan-European infrastructure for ocean and marine data
management. It aims to develop a standardized system for managing large and
diverse data sets collected by oceanographic cruises and automatic
observation systems. For this work, discrete chlorophyll-<inline-formula><mml:math id="M196" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration
observations with an “access restriction” set to “academic” and
“unrestricted” were acquired from the SeaDataNet platform with guidance from the
helpdesk. Only data from the “Institute of Marine Research – Norwegian
Marine Data Centre (NMD), Norway”, which comprised most of the acquired
data, were used. All chlorophyll observations were from discrete samples
measured by fluorometric, spectrophotometric, or HPLC methods, but the exact
method was not given. Thus, the observations were marked as
“chla_fluor”, although some were possibly from HPLC
measurements, and were flagged with “1” in a column “flag_chla_method”. The compiled variables were
“chla_fluor”.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS26">
  <label>2.2.26</label><title>Data provided by Trevor Platt and Shubha Sathyendranath (TPSS)</title>
      <p id="d1e4257">In this work, the TPSS data source refers to a group of observations that
were provided to this compilation by Trevor Platt and Shubha Sathyendranath.
This is a collection of bio-optical in situ data collected during cruises
predominantly in the Northwest Atlantic, but also from the Indian Ocean,
South Pacific, and Central Atlantic (see Sathyendranath et al., 2009 for
additional details regarding the cruises). It comprises measurements of
phytoplankton pigments and algal pigment absorption coefficients. The time
of day was unavailable and was set to 12:00:00 (UTC). These observations
were flagged with “1” in column “flag_time”. The compiled
variables were “chla_hplc”, “chla_fluor”, and
“aph”.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS27">
  <label>2.2.27</label><title>Bio-optical data from Tara expeditions (TARA)</title>
      <p id="d1e4268">The Tara expeditions consist of several cruises around the world, some with
durations of several years, designed to study and understand the
distribution of planktonic organisms in the world ocean. The discrete
observations of remote sensing reflectance and chlorophyll-<inline-formula><mml:math id="M197" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration
from HPLC measurements taken during the Tara “Oceans” (2009–2013) and
“Mediterranean” (2014) expeditions were considered in this work. These
data were provided to ESA OC-CCI project by Emmanuel Boss and were available
in the SeaBASS archive. The remote sensing reflectances were corrected for
the bidirectional nature of the light field (Morel and Gentili, 1996; Morel
et al., 2002). The compiled variables were “chla_hplc” and
“rrs”.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10" specific-use="star"><?xmltex \currentcnt{10}?><?xmltex \def\figurename{Figure}?><label>Figure 10</label><caption><p id="d1e4280">The chlorophyll-<inline-formula><mml:math id="M198" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> (mg m<inline-formula><mml:math id="M199" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) data partitioned into
<inline-formula><mml:math id="M200" display="inline"><mml:mrow><mml:mn mathvariant="normal">5</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> boxes showing <bold>(a)</bold> number of
observations, <bold>(b)</bold> average value, and <bold>(c)</bold> standard deviation in each box. All
chlorophyll data were considered, but for a given station, HPLC data were
selected if available. In the standard deviation plot, grey colour boxes
represent zero standard deviation (i.e. one observation).</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f10.png"/>

          </fig>

</sec>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Results</title>
      <p id="d1e4348">In this work, several sets of bio-optical in situ data were acquired,
homogenized, and merged into a single unified data set. The data set
comprises in situ observations between 1997 and 2021, with a global
distribution, and includes the following variables: “rrs”, “chla”, “aph”,
“adg”, “bbp”, “kd”, and “tsm”. All observations were processed in such a
way that they can be compared directly with satellite-derived ocean colour
data. The compiled data set corresponds to a table with a total of 151 673 rows and 3458 columns. Each row represents a unique station in space and
time, separated from the rest by at least 5 min and 200 m. For each
variable at a given station, three metadata strings are provided:
“dataset”, “subdataset”, and “contributor”. The columns of the table
take the form described in Table 1. The data contributors are indicated in
Table 2. Regarding spectral variables, all original wavelengths were
preserved, which required many unique wavelengths to be maintained in the
database. No band shifting was performed (though some archived data in some
data sources may have been merged with nearby wavelengths) and no minimum
number of wavelengths per observation was imposed. This allowed further
manipulation of the data set for different purposes. In the following
paragraphs, the final group of observations is described in terms of each
variable and the corresponding contributing data sets; however, it is
important to note that the numbers reported here do not reflect the original
numbers in each contributing data set, since observations close in time and
space were averaged and quality controls were applied. Furthermore,
duplicates across contributing data sets were removed (e.g. NOMAD and
others, such as MOBY, were removed from MERMAID; also, data of individual
projects, such as PALMER and AMT, can be listed under NOMAD). Nevertheless,
the reported numbers still give a general view of the contributions from
each data set and provide users with valuable information for analysing
each set of data separately.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11"><?xmltex \currentcnt{11}?><?xmltex \def\figurename{Figure}?><label>Figure 11</label><caption><p id="d1e4353">A remote-sensing reflectance maximum band ratio (as defined in
text) ([443,490,510]/555 or [443,490,510]/560 if 555 not available) as a
function of chlorophyll-<inline-formula><mml:math id="M201" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration. All chlorophyll data were
considered, but for a given station, HPLC data were selected if available.
Data within 2 nm of the wavelengths were used. For reference, the solid and
dotted lines show the NASA OC4 and OC4E v6 standard algorithms, respectively
(<uri>https://oceancolor.gsfc.nasa.gov/atbd/chlor_a/</uri>, last access: 18 December 2022). The total
number of points was 3645, of which 80 % were from NOMAD.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f11.png"/>

      </fig>

      <p id="d1e4372">Observations of remote-sensing reflectance are available at 948 unique
wavelengths (i.e. columns), between 313 and 1022.1 nm (Fig. 1). In total,
there are 68 641 observations (i.e. rows) of remote-sensing reflectance.
The total number of observations are partitioned per contributing data sets
as follows: AERONET-OC (34 551), BOUSSOLE (22 620), MOBY (6034), NOMAD
(3326), MERMAID (895), SeaBASS (730), AWI (71), COASTCOLOUR (307), and TARA
(107). Data from AERONET-OC, BOUSSOLE, and MOBY correspond to continuous time
series, and hence the higher number of observations. In comparison with
the previous version (Valente et al., 2019), which had reflectance data
until 2018, the number of stations increased by <inline-formula><mml:math id="M202" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">15</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula>
(i.e. from 59 781 to 68 641). The new data points are mainly from recent
years (2019–2021) and from updates of AERONET-OC, BOUSSOLE, MOBY, MERMAID,
and AWI. The new data extended the temporal coverage towards more recent
years, but the statistical distribution of values and the spatial coverages
(discussed below) have essentially remained the same when compared to the
previous version (Valente et al., 2019). This is explained by most of the
new observations coming from continuous time series at fixed the locations
(AERONET-OC, BOUSSOLE, MOBY).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F12" specific-use="star"><?xmltex \currentcnt{12}?><?xmltex \def\figurename{Figure}?><label>Figure 12</label><caption><p id="d1e4391">The distribution of: <bold>(a)</bold> “aph” at 44X nm; <bold>(b)</bold> “aph” at 55X;
<bold>(c)</bold> “adg” at 44X nm; <bold>(d)</bold> “adg” at 55X; <bold>(e)</bold> “bbp” at 44X nm; <bold>(f)</bold> “bbp” at 55X; <bold>(g)</bold> “kd” at 44X nm; <bold>(h)</bold> “kd” at 55X nm. Data were first
searched at 445 and 555 nm, and then with a search window up to 8 nm, to
include data at 547 nm. The graphical convention is identical to Fig. 2.</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f12.png"/>

      </fig>

      <p id="d1e4425">The distribution of the remote sensing reflectances at 44X nm and 55X nm is
provided in Fig. 2a and b, respectively. Data were first searched at 445 and
555 nm, and then with a search window up to 8 nm, to include also data at
547 nm. Median values at 44X nm ranged from 0.003 m<inline-formula><mml:math id="M203" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (AERONET-OC) and
0.009 m<inline-formula><mml:math id="M204" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (MOBY), whereas at 55X nm the median values lie between 0.001 m<inline-formula><mml:math id="M205" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (AWI) and 0.007 m<inline-formula><mml:math id="M206" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (COASTCOLOUR). The observations remain
unevenly distributed between each month of the year in both hemispheres,
with the summer months having higher data representation (Fig. 3). The
Northern Hemisphere has also more data than the Southern Hemisphere (Fig. 3). As a quality control indicator, reflectance band ratios were plotted
against each other (<inline-formula><mml:math id="M207" display="inline"><mml:mrow><mml:mn mathvariant="normal">490</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">555</mml:mn></mml:mrow></mml:math></inline-formula> versus <inline-formula><mml:math id="M208" display="inline"><mml:mrow><mml:mn mathvariant="normal">412</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">443</mml:mn></mml:mrow></mml:math></inline-formula>, Fig. 4). Most points are within
the boundaries of the NOMAD data set, but some scattered points were found.
These points were retained to allow further manipulation with different
quality control criteria. The geographic distribution of the remote-sensing
reflectance stations (Fig. 5) still show a higher number of observations in
some coastal regions, such as those of North America and Northern Europe.
Away from continental margins, the Atlantic Ocean has the highest density of
observations. Best geographic coverage is provided by the NOMAD database.
Data from SeaBASS is also well dispersed in space but fewer in number. Data
from MERMAID are mainly located along the coasts of Europe, North America,
and the central region of the North Atlantic Ocean. The observations from
AERONET-OC, BOUSSOLE, COASTCOLOUR, and MOBY are concentrated in specific
sites around the world, while AWI data are available for the Atlantic and
Arctic Oceans. TARA data are spread across several regions, with highest
data density in the Mediterranean Sea.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F13"><?xmltex \currentcnt{13}?><?xmltex \def\figurename{Figure}?><label>Figure 13</label><caption><p id="d1e4503">The distribution of absorption coefficients band ratios:
adg(443) <inline-formula><mml:math id="M209" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> adg(490), adg(412) <inline-formula><mml:math id="M210" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> adg(443), aph(490) <inline-formula><mml:math id="M211" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> aph(443) and
aph(412) <inline-formula><mml:math id="M212" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> aph(443). Data within 2 nm of the wavelengths were used. The
graphical convention is identical to Fig. 2. The vertical dashed lines show
the lower and upper thresholds used for quality control in the IOCCG report
5. The total number of points for “adg” ratios are divided between NOMAD
(89 %), COASTCOLOUR (7 %), MERMAID (3 %), and Seabass (1 %). The
total number of points for “aph” ratios are divided between NOMAD
(28 %), TPSS (23 %), AWI (23 %), COASTCOLOUR (14 %), SeaBASS
(10 %), and MERMAID (2 %).</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f13.png"/>

      </fig>

      <p id="d1e4540">Observations of chlorophyll-<inline-formula><mml:math id="M213" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration were divided into those measured
by fluorometric or spectrophotometric methods (“chla_fluor”), and HPLC methods (“chla_hplc”). A comparison of
the two types of measurements, when available at the same station (Fig. 6),
shows good agreement (Trees et al., 1985). No data were filtered for this
analysis and the good correlation can be explained in part by the quality
control measures implemented by the data providers and curators of
repositories such as NOMAD and SeaBASS (Werdell and Bailey, 2005). The total
number of stations with concurrent observations of “chla_fluor” and “chla_hplc” is 5953, with contributions from
SeaBASS (39 %), TPSS (16 %), PALMER (14 %), NOMAD (11 %), BATS
(5 %), COASTCOLOUR (4 %), MERMAID (4 %), HOT (4 %), and AMT <inline-formula><mml:math id="M214" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>
GeP&amp;CO <inline-formula><mml:math id="M215" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> BODC <inline-formula><mml:math id="M216" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CCELTER <inline-formula><mml:math id="M217" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CALCOFI (3 %). The
“chla_fluor” observations are available in 61 317 stations
(rows), with values limited to the range between 0.001 to 100 mg m<inline-formula><mml:math id="M218" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
(Fig. 7). They are from NOMAD (2350), SeaBASS (18 575), MERMAID (480), ICES
(5421), HOT (755), AMT (396), ARCSSPP (189), BARENTSSEA (7188), BATS
(356), BIOCHEM (4592), BODC (895), CALCOFI (5396), COASTCOLOUR (3322),
CCELTER (468), CIMT (204.), ESTOC (100), GEPCO (56), IMOS (1136), PALMER
(3237), SEADATANET (5403), and TPSS (1000). The total number of
“chla_hplc” observations is 27 215, ranging from 0.002 to
99.8 mg m<inline-formula><mml:math id="M219" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Fig. 7), with contributions from NOMAD (1309), SeaBASS
(10 257), MERMAID (707), ICES (2994), HOT (222), GeP&amp;CO (1536),
BOUSSOLE (577), AMT (1359), AWI (2343), BATS (334), BODC (735),
COASTCOLOUR (848), IMOS (340), MAREDAT (1024), PALMER (1525), TPSS (1002),
and TARA (161). Compared to the previous version (Valente et al., 2019), the
“chla_hplc” observations increased by <inline-formula><mml:math id="M220" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">16</mml:mn></mml:mrow></mml:math></inline-formula> % (23 550 to 27 215). As for the “chla_fluor”
observations, they have decreased (from 61 525 to 61 317), which is
explained by the added observations (<inline-formula><mml:math id="M221" display="inline"><mml:mrow><mml:mi>N</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">303</mml:mn></mml:mrow></mml:math></inline-formula>3) being less than the removed
stations due to quality control (<inline-formula><mml:math id="M222" display="inline"><mml:mrow><mml:mi>N</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3241</mml:mn></mml:mrow></mml:math></inline-formula>; see Sect. 2.2.6). The new data
points come from updates of BOUSSOLE, MERMAID, SeaBASS, HOT, AMT, PALMER,
CCELTER, CALCOFI, AWI, and IMOS.</p>
      <p id="d1e4637">The combined chlorophyll data set (all chlorophyll data considered, but for
a given station, HPLC data were selected if available), has a total of
82 543 observations, which represents an increase of <inline-formula><mml:math id="M223" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula>
(i.e. from 79 731 to 82 543) when compared to the previous version (Valente
et al., 2019). The present version represents a major increase in the number
of recent observations. For the combined chlorophyll data set, 533 stations
were available in previous version for the period 2016–2017 (previous
version had chlorophyll data until 2017). Now, there are 5140 stations for
the period 2016–2021, which represents an increase of <inline-formula><mml:math id="M224" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">964</mml:mn></mml:mrow></mml:math></inline-formula> % for the period of 2016 onwards. Overall, data distribution and spatial
coverage remain the same between present and previous versions.
Approximately 10 %, 50 %, and 40 % of observations are from
oligotrophic (<inline-formula><mml:math id="M225" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn></mml:mrow></mml:math></inline-formula> mg m<inline-formula><mml:math id="M226" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), mesotrophic (0.1–1 mg m<inline-formula><mml:math id="M227" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>),
and eutrophic (<inline-formula><mml:math id="M228" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> mg m<inline-formula><mml:math id="M229" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) waters, respectively. When
compared with the proportions of the world ocean in these trophic classes,
56 % oligotrophic, 42 % mesotrophic, and 2 % eutrophic (Antoine et al.,
1996), oligotrophic waters are still under-represented relative to eutrophic
waters in the compilation. The combined chlorophyll data set is also still
unevenly distributed geographically, with higher coverage in the Northern
Hemisphere (Fig. 3). The spatial distribution of the chlorophyll values for
the combined data set (Fig. 8) shows a good agreement with known
biogeographical features, such as lower chlorophyll values in the
subtropical gyres and higher values in temperate, coastal, and upwelling
regions. Many regions show a good spatial coverage (e.g. Atlantic and
Pacific Ocean), while others are less well sampled (e.g. Southern and
Indian oceans). Of the contributing data sets, SeaBASS provides the most
extensive global spatial coverage (Fig. 9). Other data sets also provide
broad coverage from several locations across the globe (NOMAD, GEPCO,
MAREDAT, TARA). The ICES, MERMAID, and BODC data are mainly located along the
coastal regions of Europe. The AMT and many AWI data mostly cover the
Atlantic Ocean. Other AWI data cover the Amundsen to Bellinghausen Sea of
the Southern Ocean, the North Sea, the Arctic Ocean, the Indian Ocean, and
the subtropical and tropical Pacific. Coverage for the Arctic region and
northern seas of the North Atlantic is provided by SEADATANET, ARCSSPP, and
BARENTSEA data sets. Observations from BIOCHEM and TPSS are mostly from the
Northwest Atlantic, whereas CALCOFI, CCELTER, and CIMT provide data for the
western coast of North America. The data from IMOS mainly covers the coastal
Australian waters. The remaining data sets provide observations for fixed
locations: PALMER (western Antarctic peninsula), COASTCOLOUR (17 coastal
sites across the world), BATS (Bermuda, North Atlantic), BOUSSOLE
(Mediterranean), HOT (Hawaii, North Pacific), and ESTOC (Canaries, North
Atlantic). Figure 9 shows all data sources that contribute with chlorophyll
observations, but many overlap each other, especially around Europe and
North America. For additional analysis and as an example of the applications
of the compiled dataset, the combined chlorophyll data
(“chla_fluor” and “chla_hplc”) were
partitioned into <inline-formula><mml:math id="M230" display="inline"><mml:mrow><mml:mn mathvariant="normal">5</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> boxes, and for each
box the number of observations, average value, and standard deviation were
computed (Fig. 10a, b, and c, respectively). The number of observations can
be very high (<inline-formula><mml:math id="M231" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1000</mml:mn></mml:mrow></mml:math></inline-formula>) in some boxes along the European and North
American coastlines and relatively low (<inline-formula><mml:math id="M232" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula>) in oceanic regions.
The well-known global biogeographical features, such as the lower
chlorophyll in the subtropical gyres and higher values in coastal and
upwelling areas, clearly emerge in the average value map (Fig. 10b). There
is a close correspondence between the spatial patterns of the average and
standard deviation maps (Fig. 10b and c), which may be an indicator of the
data quality.</p>
      <p id="d1e4761">Coincident observations of chlorophyll-<inline-formula><mml:math id="M233" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration and remote-sensing
reflectance are available at 3645 stations. These observations are mostly
from NOMAD (80 %), MERMAID (9 %), COASTCOLOUR (6 %), and SeaBASS (3 %). The maximum of three selected band ratios of remote-sensing
reflectance is plotted against chlorophyll-<inline-formula><mml:math id="M234" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration (Fig. 11). The
“chla” values used are the combined HPLC and fluorometric chlorophyll-<inline-formula><mml:math id="M235" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>,
and for the “rrs”, the closest spectral observation within 2 nm was used.
The maximum band ratios were calculated as the maximum of
[rrs(443) <inline-formula><mml:math id="M236" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> rrs(555), rrs(490) <inline-formula><mml:math id="M237" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> rrs(555), rrs(510) <inline-formula><mml:math id="M238" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> rrs(555)] or
[rrs(443) <inline-formula><mml:math id="M239" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> rrs(560), rrs(490) <inline-formula><mml:math id="M240" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> rrs(560), rrs(510) <inline-formula><mml:math id="M241" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> rrs(560)] if rrs(555) was
not available. The relationship between maximum band ratio and chlorophyll
is close to the NASA OC4 and OC4E v6 standard algorithm
(<uri>http://oceancolor.gsfc.nasa.gov/cms/atbd/chlor_a</uri>, last access: 18 December 2022) similarly
based on maximum band ratios, providing confidence in the quality of the
compiled data. Compared to the previous version (Valente et al., 2019), the
relations between maximum band ratio and chlorophyll are not altered by the
additional number of concurrent observations (<inline-formula><mml:math id="M242" display="inline"><mml:mrow><mml:mi>N</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">13</mml:mn></mml:mrow></mml:math></inline-formula>).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T6" specific-use="star"><?xmltex \currentcnt{3}?><label>Table 3</label><caption><p id="d1e4846">Summary of median values for “aph”, “adg”, and “bbp” at 44X
and 55X nm for each data set (as shown in Fig. 12a–f). Data were first
searched at 445 and 555 nm, and then with a search window up to 8 nm, to
include data at 547 nm.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="center" colsep="1"/>
     <oasis:colspec colnum="4" colname="col4" align="center"/>
     <oasis:colspec colnum="5" colname="col5" align="center" colsep="1"/>
     <oasis:colspec colnum="6" colname="col6" align="center"/>
     <oasis:colspec colnum="7" colname="col7" align="center"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" namest="col2" nameend="col3" colsep="1">Median “aph” </oasis:entry>
         <oasis:entry rowsep="1" namest="col4" nameend="col5" colsep="1">Median “adg” </oasis:entry>
         <oasis:entry rowsep="1" namest="col6" nameend="col7">Median “bbp” </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">44x nm</oasis:entry>
         <oasis:entry colname="col3">55x nm</oasis:entry>
         <oasis:entry colname="col4">44x nm</oasis:entry>
         <oasis:entry colname="col5">55x nm</oasis:entry>
         <oasis:entry colname="col6">44x nm</oasis:entry>
         <oasis:entry colname="col7">55x nm</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">SeaBASS</oasis:entry>
         <oasis:entry colname="col2">0.0712</oasis:entry>
         <oasis:entry colname="col3">0. 0117</oasis:entry>
         <oasis:entry colname="col4">0.0711</oasis:entry>
         <oasis:entry colname="col5">0.0222</oasis:entry>
         <oasis:entry colname="col6">0.0035</oasis:entry>
         <oasis:entry colname="col7">0.0025</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MERMAID</oasis:entry>
         <oasis:entry colname="col2">0.0282</oasis:entry>
         <oasis:entry colname="col3">0.0052</oasis:entry>
         <oasis:entry colname="col4">0.1149</oasis:entry>
         <oasis:entry colname="col5">0.0286</oasis:entry>
         <oasis:entry colname="col6">0.0080</oasis:entry>
         <oasis:entry colname="col7">0.0052</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">NOMAD</oasis:entry>
         <oasis:entry colname="col2">0.0353</oasis:entry>
         <oasis:entry colname="col3">0.0046</oasis:entry>
         <oasis:entry colname="col4">0.0515</oasis:entry>
         <oasis:entry colname="col5">0.0112</oasis:entry>
         <oasis:entry colname="col6">0.0030</oasis:entry>
         <oasis:entry colname="col7">0.0022</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">COASTCOLOUR</oasis:entry>
         <oasis:entry colname="col2">0.0665</oasis:entry>
         <oasis:entry colname="col3">0.0096</oasis:entry>
         <oasis:entry colname="col4">0.1259</oasis:entry>
         <oasis:entry colname="col5">0.0175</oasis:entry>
         <oasis:entry colname="col6">0.0047</oasis:entry>
         <oasis:entry colname="col7">0.0037</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">AWI</oasis:entry>
         <oasis:entry colname="col2">0.0239</oasis:entry>
         <oasis:entry colname="col3">0.0048</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
         <oasis:entry colname="col7">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">TPSS</oasis:entry>
         <oasis:entry colname="col2">0.0454</oasis:entry>
         <oasis:entry colname="col3">0.0071</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
         <oasis:entry colname="col7">–</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <?xmltex \floatpos{t}?><fig id="Ch1.F14" specific-use="star"><?xmltex \currentcnt{14}?><?xmltex \def\figurename{Figure}?><label>Figure 14</label><caption><p id="d1e5066">Global distribution of observations of inherent optical
properties (algal pigment absorption coefficient “aph”, detrital plus CDOM
absorption coefficient “adg”, and particle backscattering coefficient
“bbp”) in the final table.</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f14.png"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F15" specific-use="star"><?xmltex \currentcnt{15}?><?xmltex \def\figurename{Figure}?><label>Figure 15</label><caption><p id="d1e5077">Global distribution of diffuse attenuation coefficient for
downward irradiance (“kd”) and total suspended matter (“tsm”) per data
set in the final table. The “tsm” and “kd” points from MERMAID overlap
each other in west Black Sea (<inline-formula><mml:math id="M243" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M244" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 30<inline-formula><mml:math id="M245" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E) and Arctic (<inline-formula><mml:math id="M246" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">70</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M247" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 120<inline-formula><mml:math id="M248" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W).</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f15.png"/>

      </fig>

      <p id="d1e5141">The inherent optical properties (“aph”, “adg”, and “bbp”) are available
at 550 unique wavelengths between 300 and 850 nm. There is a total of 4265,
1654, and 792 observations, for “aph”, “adg”, and “bbp”, respectively.
For “aph”, the total number of observations is distributed among NOMAD
(1190), TPSS (966), COASTCOLOUR (593), AWI (991), SeaBASS (453), and MERMAID
(72). For “adg”, the contributions are as follows: NOMAD (1079),
COASTCOLOUR (531), SeaBASS (11), and MERMAID (33). The “bbp” observations
come from NOMAD (371), COASTCOLOUR (154), SeaBASS (32), and MERMAID (235).
Compared to the previous version (Valente et al., 2019), only “aph” was
updated, resulting in a <inline-formula><mml:math id="M249" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">30</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> increase (i.e. from 3293
to 4265). Most of the new observations fall within the period 2012–2020,
thus increasing the temporal coverage (previous version had “aph” until
2012). Data distribution of “aph”, “adg”, and “bbp” at 44X nm and 55X nm for each data set is provided in Fig. 12a–f. Median values of “aph”,
“adg”, and “bbp” at 44X and 55X nm for each data set are summarized in
Table 3. As a quality indicator, the following band ratios for the
absorption coefficients were calculated: aph(490) <inline-formula><mml:math id="M250" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> aph(443),
aph(412) <inline-formula><mml:math id="M251" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> aph(443), adg(443) <inline-formula><mml:math id="M252" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> adg(490), and adg(412) <inline-formula><mml:math id="M253" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> adg(443). Data within 2 nm
of the wavelengths were used to maximize the number of points. The
distribution of the ratios is shown in Fig. 13. Several observations were
found to be outside the thresholds used in the International Ocean-Colour
Coordinating Group (IOCCG) report 5 for quality control (IOCCG, 2006; see
dotted vertical black lines in Fig. 13). These points are highlighted here
for information but retained in the database, since these were mostly from
NOMAD and there was an interest to preserve this data set as a whole. Also,
not discarding these data allows further manipulation with different quality
control criteria. On the annual scale, the observations of the inherent
optical properties continue to be strongly underrepresented in the Southern
Hemisphere where there is a complete absence of data during the austral
winter (Fig. 3). The new “aph” data in the present version have only
increased the spatial coverage in the Arctic region. Overall, the geographic
coverage for observations of “aph”, “adg”, and “bbp” (Fig. 14) is poor,
with most open ocean regions not being sampled, except for the Atlantic
Ocean. Small clusters of data are in specific coastal regions, such as the
western coast of North America.</p>
      <p id="d1e5185">Finally, for the diffuse attenuation coefficient for downward irradiance
(“kd”, not updated in present version), there are 25 unique wavelengths
between 405 and 709 nm. The total of 2454 observations is divided between
NOMAD (2266), SeaBASS (118), and MERMAID (70). Data distribution of “kd”
at 44X nm and 55X nm for each data set is shown in Fig. 12g and h. No
“kd” data at these wavelengths were available for the SeaBASS data set
(only at 490 nm). Median values of “kd” at 44X nm span between 0.08 m<inline-formula><mml:math id="M254" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (NOMAD) and 0.1 m<inline-formula><mml:math id="M255" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (MERMAID), whereas at 55X nm the “kd”
values are approximately 0.1 m<inline-formula><mml:math id="M256" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (NOMAD and MERMAID). The best
geographical coverage is provided by NOMAD (Fig. 15), with a higher coverage
in the Atlantic, compared with other oceans. Except for the coastal regions
of North America and the Japan Sea, most coastal regions are not sampled. In
the Northern Hemisphere, “kd” is distributed evenly across all months of
the year, but in the Southern Hemisphere there are few data points during
the austral winter (Fig. 3). For total suspended matter (“tsm”; not
updated on present version), there is a total of 1546 observations divided
between COASTCOLOUR (1199) and MERMAID (347). The observations of “tsm”
are available in a greater number in the Northern Hemisphere (Fig. 3) and
are distributed across several coastal regions around Europe, Mediterranean
Sea, China Sea, Indonesia, and Australia (Fig. 15).</p>
      <p id="d1e5224">Although most of the stations with concurrent variables are from the NOMAD
data set, for completeness, an examination of bio-optical relationships is
provided (Fig. 16). The relation between “aph” at 443 nm and chlorophyll-<inline-formula><mml:math id="M257" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
(Fig. 16a) agrees with Bricaud et al. (2004). A total of 3387 points exist
with these two variables available (29 % from NOMAD, 28 % from TPSS,
22 % from AWI, 10 % from COASTCOLOUR, and remaining 11 % from MERMAID
and SeaBASS). The relation between the sum of “aph” and “adg” at 443 nm
and “rrs” at 443 nm (Fig. 16b) shows a dispersion similar, except for
some scattered points, to an equivalent analysis on the IOCCG report 5
(IOCCG, 2006; see their Fig. 2.3). Again, the scattered data were retained
in the final table to preserve the NOMAD data set. A total of 1112 points
exists for which these three variables are available (97 % from NOMAD).
The relation between the ratio rrs(490) <inline-formula><mml:math id="M258" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> rrs(555) and kd(490) (Fig. 16c)
shows a good agreement with the NASA KD2S standard algorithm
(<uri>https://oceancolor.gsfc.nasa.gov/atbd/kd/</uri>, last access: 18 December 2022). A total of
2280 points exists for which these three variables are available (93 %
from NOMAD). The relation between the ratio rrs(490) <inline-formula><mml:math id="M259" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> rrs(555) and “bbp” at
555 nm (Fig. 16c) shows a good agreement with the relation suggested by
Tiwari and Shanmugam (2013). A total of 365 points exists for which these
three variables are available (89 % from NOMAD).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F16" specific-use="star"><?xmltex \currentcnt{16}?><?xmltex \def\figurename{Figure}?><label>Figure 16</label><caption><p id="d1e5253">Examples of bio-optical relationships in the final merged table:
<bold>(a)</bold> aph(443) versus chlorophyll-<inline-formula><mml:math id="M260" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. Total number of points (3387) is divided
between AWI (753), COASTCOLOUR (335), MERMAID (214), NOMAD (991), SeaBASS
(139), and TPSS (955). For reference, the solid line shows the regression from
Bricaud et al. (2004). <bold>(b)</bold> [aph(443) <inline-formula><mml:math id="M261" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> adg(443)] versus rrs(443). Total
number of points (1112) is divided between MERMAID (33) and NOMAD (1079).
<bold>(c)</bold> [rrs(490) <inline-formula><mml:math id="M262" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> rrs(555)] versus kd(490). The total number of points (2280)
is divided between MERMAID (62), NOMAD (2117), and SeaBASS (101). For
reference, the solid line shows the NASA KD2S standard algorithm
(<uri>https://oceancolor.gsfc.nasa.gov/atbd/kd/</uri>, last access: 18 December 2022).
<bold>(d)</bold> [rrs(490) <inline-formula><mml:math id="M263" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> rrs(555)] versus bbp(555). The total number of points (365) is
divided between MERMAID (33), NOMAD (324), COASTCOLOUR (4), and SeaBASS (4).
For reference, the solid line shows the relation proposed by Tiwari and
Shanmugam (2013). A search window of 2 nm was used for <bold>(a)</bold> and <bold>(b)</bold>, and a
search window of 5 nm was used for <bold>(c)</bold> and <bold>(d)</bold> to include data at 560 nm
when not available at 555 nm.</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://essd.copernicus.org/articles/14/5737/2022/essd-14-5737-2022-f16.png"/>

      </fig>

</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Data availability</title>
      <p id="d1e5327">Information about the data availability can be found in Appendix B.</p>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Summary and conclusions</title>
      <p id="d1e5339">In this work, a compilation of bio-optical in situ data is presented,
resulting from the acquisition, homogenization, and unification of several
sets of data obtained from different sources. The compiled data have a
global coverage and span the period from 1997 to 2021, which corresponds to
the period of a continuous satellite ocean colour data record. Minimal
changes were made on the original data, other than conversion to standard
format, data reductions in time and space, and quality control. In situ
measurements of the following variables were compiled: remote-sensing
reflectance, chlorophyll-<inline-formula><mml:math id="M264" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration, algal pigment absorption
coefficient, detrital and coloured dissolved organic matter absorption
coefficient, particle backscattering coefficient, diffuse attenuation
coefficient for downward irradiance, and total suspended matter.</p>
      <p id="d1e5349">The final set of data consists of a substantial number of in situ
observations, available in a simple text format, and processed in a way that
is used directly for the evaluation of satellite-derived ocean colour data.
The major advantages of this compilation are that it merges six
commonly-used data sources in ocean colour validation (MOBY, BOUSSOLE,
AERONET-OC, SeaBASS, NOMAD, MERMAID), four data sources developed for
ocean colour applications (AWI, COASTCOLOUR, TPSS, and TARA), and 17
additional sets of chlorophyll-<inline-formula><mml:math id="M265" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration data (AMT, ICES, HOT,
GeP&amp;CO, ARCSSPP, BARENTSSEA, BATS, BIOCHEM, BODC, CALCOFI, CCELTER, CIMT,
ESTOC, IMOS, MAREDAT, PALMER, SEADATANET) free of duplicated observations.
This data set was initially created with the intention of evaluating the
quality of the satellite ocean colour products from the ESA OC-CCI project,
but it can also be used for other purposes, including the validation of
retrievals from recent satellite missions such as Landsat 8 and Sentinel 2.
It may also be useful in the preparation of future sensors like NASA PACE.
In addition, it is likely one of the largest collections of chlorophyll-<inline-formula><mml:math id="M266" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentrations ever assembled, making it useful for the climate and
biological scientific communities. The objective of publishing the
compilation is to make it easily accessible for the broader community.</p>
      <p id="d1e5366">In comparison with previous versions, the main advantage of the present version
(version 3) is that it includes more recent data (especially from 2016
onwards). These new data are key for the validation of the most recent
ocean colour missions (e.g. Sentinel 2B and Sentinel 3B) and for other
activities such as System Vicarious Calibration. Future improvements of this
data collection could be made by continuing to analyse the available data
from the projects, cruises, and archives described in the present work
(namely SeaBASS archive which hosts many bio-optical in situ data) and find
new data sources, while making sure that the already compiled data sets are
the most updated ones following scientific advances and improved quality
control measures.</p>
</sec>

      
      </body>
    <back><app-group>

<app id="App1.Ch1.S1">
  <?xmltex \currentcnt{A}?><label>Appendix A</label><title>Notation</title>

        <table-wrap id="Taba" position="anchor"><oasis:table><?xmltex \begin{scaleboxenv}{.70}[.70]?><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">ad</oasis:entry>
         <oasis:entry colname="col2">Detrital absorption coefficient (m<inline-formula><mml:math id="M267" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">adg</oasis:entry>
         <oasis:entry colname="col2">Detrital plus CDOM absorption coefficient (m<inline-formula><mml:math id="M268" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">AERONET-OC</oasis:entry>
         <oasis:entry colname="col2">AErosol RObotic NETwork-Ocean Color</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ag</oasis:entry>
         <oasis:entry colname="col2">CDOM absorption coefficient (m<inline-formula><mml:math id="M269" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">AMT</oasis:entry>
         <oasis:entry colname="col2">Atlantic Meridional Transect</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ap</oasis:entry>
         <oasis:entry colname="col2">Particle absorption coefficient (m<inline-formula><mml:math id="M270" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">aph</oasis:entry>
         <oasis:entry colname="col2">Algal pigment absorption coefficient (m<inline-formula><mml:math id="M271" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ARCSSPP</oasis:entry>
         <oasis:entry colname="col2">Arctic System Science Primary Production</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">AWI</oasis:entry>
         <oasis:entry colname="col2">Data collection from Astrid Bracher</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">aw</oasis:entry>
         <oasis:entry colname="col2">Pure water absorption coefficient (m<inline-formula><mml:math id="M272" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">BARENTSSEA</oasis:entry>
         <oasis:entry colname="col2">Data collection from Knut Yngve Børsheim</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">BATS</oasis:entry>
         <oasis:entry colname="col2">Bermuda Atlantic Time-series Study</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">bb</oasis:entry>
         <oasis:entry colname="col2">Total backscattering coefficient (m<inline-formula><mml:math id="M273" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">bbp</oasis:entry>
         <oasis:entry colname="col2">Particle backscattering coefficient (m<inline-formula><mml:math id="M274" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">bbw</oasis:entry>
         <oasis:entry colname="col2">Backscattering coefficient of seawater (m<inline-formula><mml:math id="M275" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">BIOCHEM</oasis:entry>
         <oasis:entry colname="col2">The Fisheries and Oceans Canada database for biological</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">and chemical data</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">BODC</oasis:entry>
         <oasis:entry colname="col2">British Oceanographic Data Centre</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">BOUSSOLE</oasis:entry>
         <oasis:entry colname="col2">Bouée pour l'acquisition d'une Série Optique à Long Terme</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CALCOFI</oasis:entry>
         <oasis:entry colname="col2">California Cooperative Oceanic Fisheries Investigations</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CCELTER</oasis:entry>
         <oasis:entry colname="col2">California Current Ecosystem Long-Term Ecological Research</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CDOM</oasis:entry>
         <oasis:entry colname="col2">Coloured dissolved organic matter</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">chla</oasis:entry>
         <oasis:entry colname="col2">Chlorophyll-<inline-formula><mml:math id="M276" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration (mg m<inline-formula><mml:math id="M277" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">chla_fluor</oasis:entry>
         <oasis:entry colname="col2">Chlorophyll-<inline-formula><mml:math id="M278" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration determined from fluorometric</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">or spectrophotometric methods (mg m<inline-formula><mml:math id="M279" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">chla_hplc</oasis:entry>
         <oasis:entry colname="col2">Total chlorophyll-<inline-formula><mml:math id="M280" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration determined from</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">HPLC method (mg m<inline-formula><mml:math id="M281" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CIMT</oasis:entry>
         <oasis:entry colname="col2">Center for Integrated Marine Technology</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">COASTCOLOUR</oasis:entry>
         <oasis:entry colname="col2">Compilation of data in several coastal sites</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Es</oasis:entry>
         <oasis:entry colname="col2">Surface irradiance (or above-water downwelling irradiance)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(mW cm<inline-formula><mml:math id="M282" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> <inline-formula><mml:math id="M283" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m<inline-formula><mml:math id="M284" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ESA</oasis:entry>
         <oasis:entry colname="col2">European Space Agency</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ESTOC</oasis:entry>
         <oasis:entry colname="col2">Estación Europea de Series Temporales del Oceano</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Fo</oasis:entry>
         <oasis:entry colname="col2">Top-of-the-atmosphere solar irradiance</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(mW cm<inline-formula><mml:math id="M285" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> <inline-formula><mml:math id="M286" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m<inline-formula><mml:math id="M287" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">GeP&amp;CO</oasis:entry>
         <oasis:entry colname="col2">Geochemistry, Phytoplankton, and Color of the Ocean</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">HOT</oasis:entry>
         <oasis:entry colname="col2">Hawaii Ocean Time-series</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">HPLC</oasis:entry>
         <oasis:entry colname="col2">High-performance liquid chromatography</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ICES</oasis:entry>
         <oasis:entry colname="col2">International Council for the Exploration of the Sea</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">IMOS</oasis:entry>
         <oasis:entry colname="col2">Integrated Marine Observing System</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">kd</oasis:entry>
         <oasis:entry colname="col2">Diffuse attenuation coefficient for downward irradiance (m<inline-formula><mml:math id="M288" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Lw</oasis:entry>
         <oasis:entry colname="col2">Water-leaving radiance (or above-water upwelling radiance)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(mW cm<inline-formula><mml:math id="M289" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> <inline-formula><mml:math id="M290" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m<inline-formula><mml:math id="M291" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> sr<inline-formula><mml:math id="M292" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MAREDAT</oasis:entry>
         <oasis:entry colname="col2">Compilation of data in several coastal sites</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MERIS</oasis:entry>
         <oasis:entry colname="col2">Medium Resolution Imaging Spectrometer</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MERMAID</oasis:entry>
         <oasis:entry colname="col2">MERIS Match-up In situ Database</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MOBY</oasis:entry>
         <oasis:entry colname="col2">Marine optical buoy</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MODIS</oasis:entry>
         <oasis:entry colname="col2">Moderate-resolution Imaging Spectroradiometer</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MVCO</oasis:entry>
         <oasis:entry colname="col2">Martha's Vineyard Coastal Observatory</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">NASA</oasis:entry>
         <oasis:entry colname="col2">National Aeronautics and Space Administration</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">nLw</oasis:entry>
         <oasis:entry colname="col2">Normalized water-leaving radiance (mW cm<inline-formula><mml:math id="M293" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> <inline-formula><mml:math id="M294" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m<inline-formula><mml:math id="M295" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> sr<inline-formula><mml:math id="M296" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">nLw_ex</oasis:entry>
         <oasis:entry colname="col2">nLw with a correction for bidirectional effects</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(mW cm<inline-formula><mml:math id="M297" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> <inline-formula><mml:math id="M298" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m<inline-formula><mml:math id="M299" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> sr<inline-formula><mml:math id="M300" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">NOMAD</oasis:entry>
         <oasis:entry colname="col2">NASA bio-Optical Marine Algorithm Data set</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">OC-CCI</oasis:entry>
         <oasis:entry colname="col2">Ocean Colour Climate Change Initiative</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">OLCI</oasis:entry>
         <oasis:entry colname="col2">Ocean and Land Colour Instrument</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">PALMER</oasis:entry>
         <oasis:entry colname="col2">Palmer station Long-term Ecological Research</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">rrs</oasis:entry>
         <oasis:entry colname="col2">Remote-sensing reflectance (sr<inline-formula><mml:math id="M301" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Rw</oasis:entry>
         <oasis:entry colname="col2">Irradiance reflectance (dimensionless)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SeaBASS</oasis:entry>
         <oasis:entry colname="col2">SeaWiFS Bio-optical Archive and Storage System</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SEADATANET</oasis:entry>
         <oasis:entry colname="col2">Archive of in situ marine data</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SeaWiFS</oasis:entry>
         <oasis:entry colname="col2">Sea-viewing Wide Field-of-view Sensor</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">TARA</oasis:entry>
         <oasis:entry colname="col2">Data collection from global transects</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">TPSS</oasis:entry>
         <oasis:entry colname="col2">Data collection from Trevor Platt and Shubha Sathyendranath</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">VIIRS</oasis:entry>
         <oasis:entry colname="col2">Visible Infrared Imaging Radiometer Suite</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <?xmltex \hack{\clearpage}?>
</app>

<app id="App1.Ch1.S2">
  <?xmltex \currentcnt{B}?><label>Appendix B</label><title>Data availability</title>
      <p id="d1e6384">The compiled data are available at
<ext-link xlink:href="https://doi.org/10.1594/PANGAEA.941318" ext-link-type="DOI">10.1594/PANGAEA.941318</ext-link> (Valente et al., 2022). The
database is composed of three main tables: table “insitudb_chla.csv” with the observations of “chla_fluor” and
“chla_hplc”; table “insitudb_rrs.csv” with
observations of “rrs”; and table “insitudb_iopskdtsm.csv”
with remaining observations (“aph”, “adg”, “bbp”, “kd”, and “tsm”). The rows
within the three tables relate to each other via a unique key (column
“idx”). The three tables can be viewed conceptually as one table with all
data. To help with data manipulation, six auxiliary tables derived from the
previous three main tables are provided. The table “insitudb_metadata.csv” contains all available metadata and helps, for example, to
find rows (i.e. “idx”) with multiple variables (e.g. “rrs” and
“chla_fluor”). The table “auxiliary_table_contributors.csv” contains the number of observations
per data contributor, variable, and dataset. The remaining four tables
(“insitudb_rrs_satbands2.csv”,
“insitudb_rrs_satbands6.csv”,
“insitudb_iopskdtsm_satbands2.csv”, and
“insitudb_iopskdtsm_satbands6.csv”) contain
the spectral data of the main tables (i.e. “insitudb_rrs.csv” and “insitudb_iopskdtsm.csv”) aggregated within
<inline-formula><mml:math id="M302" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M303" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:math></inline-formula> nm, respectively, of SeaWiFS, MODIS AQUA, MERIS,
VIIRS-SNPP, VIIRS-JPSS, OLCI-S3A, and OLCI-S3B sensor bands. The tables are
generated by assigning, in each row of the main tables (i.e.
“insitudb_rrs.csv” and “insitudb_iopskdtsm.csv”), the closest spectral observation within 2 nm (or 6 nm) of a
sensor band. The centre wavelengths of each band and sensor used in the
generation of the files are the following: SeaWiFS bands 1–8 were centred at
[412, 443, 490, 510, 555, 670, 765, 865] nm, respectively; MODIS-AQUA bands
1–9 were centred at [412, 443, 488, 531, 547, 667, 678, 748, 869] nm,
respectively; MERIS bands 1–13 were centred at [412, 442, 490, 510, 560,
620, 665, 681, 709, 753, 779, 865, 885] nm, respectively; VIIRS-SNPP bands
1-6 were centred at [410, 443, 486, 551, 671, 746] nm, respectively;
VIIRS-JPSS bands 1–6 were centred at [411, 445, 489, 556, 667, 746] nm,
respectively; and OLCI-S3A and OLCI-S3B bands 1–15 were centred at [400, 412,
443, 490, 510, 560, 620, 665, 674, 681, 709, 754, 779, 865, 885] nm. An
exception to this procedure was made to confirm that the correct MOBY data
are stored in the files (see Sect. 2.2.1. for discussion on how MOBY
wavelengths are stored in the main file). Finally, a “readme” file is
provided to help the user. Table 1 shows what the compiled data looks like.
An example of a query for available chlorophyll data from
subdataset “seabass_car81” is given.
<?xmltex \hack{\clearpage}?></p>

<?xmltex \floatpos{h!}?><table-wrap id="App1.Ch1.S2.T7"><?xmltex \hack{\hsize\textwidth}?><?xmltex \currentcnt{B1}?><label>Table B1</label><caption><p id="d1e6415">Example of what the compiled data looks like. It shows the
result when the compilation is queried for chlorophyll data from
subdataset “seabass_car81”.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.80}[.80]?><oasis:tgroup cols="8">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:colspec colnum="7" colname="col7" align="left"/>
     <oasis:colspec colnum="8" colname="col8" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">idx</oasis:entry>
         <oasis:entry colname="col2">time</oasis:entry>
         <oasis:entry colname="col3">lat</oasis:entry>
         <oasis:entry colname="col4">lon</oasis:entry>
         <oasis:entry colname="col5">chla_fluor</oasis:entry>
         <oasis:entry colname="col6">chla_fluor_dataset</oasis:entry>
         <oasis:entry colname="col7">chla_fluor_subdataset</oasis:entry>
         <oasis:entry colname="col8">chla_fluor_contributor</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">30266</oasis:entry>
         <oasis:entry colname="col2">2002-08-06 T09:02:00Z</oasis:entry>
         <oasis:entry colname="col3">10.5</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M304" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">64.67</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.185</oasis:entry>
         <oasis:entry colname="col6">seabass</oasis:entry>
         <oasis:entry colname="col7">seabass_car81</oasis:entry>
         <oasis:entry colname="col8">Frank_Muller-Karger</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

</app>
  </app-group><notes notes-type="specialsection"><title>Note on former version</title>
    

      <p id="d1e6516">A former version of this article was published on 15 July 2019 and is available at <ext-link xlink:href="https://doi.org/10.5194/essd-11-1037-2019" ext-link-type="DOI">10.5194/essd-11-1037-2019</ext-link>.</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d1e6522">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/essd-14-5737-2022-supplement" xlink:title="pdf">https://doi.org/10.5194/essd-14-5737-2022-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e6531">AV complied the database, carried out the integration and quality checking,
and drafted the paper. The first eight authors are part of the ESA
OC-CCI team and contributed to the design of the compilation, to the
quality checking, and contributed data. The remaining authors are
listed alphabetically and are data contributors (see their respective data
set on Table 2) or individuals responsible for the development of a
particular data set (e.g. JW for NOMAD and KB for
MERMAID). All data contributors (listed in Table 2) were contacted for
authorization of data publishing and offered co-authorship. In the case of
the ICES data set, the permission for publishing was given by the ICES team.
All the authors have critically reviewed the paper.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e6537">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d1e6543">Publisher’s note: Copernicus Publications remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e6549">This paper acknowledges funding from the ESA OC-CCI project (grant number
4000101437/10/I-LG), the EUMETSAT “Multi-mission Ocean Colour Algorithm
Prototyping” (OMAPS), and the European Union's Horizon 2020 research and
innovation programme under grant agreement 810139: Project Portugal Twinning
for Innovation and Excellence in Marine Science and Earth Observation –
PORTWIMS. This work is also a contribution to project
PEst-OE/MAR/UI0199/2014. We would like to thank the efforts of the teams
responsible for collection of the data in the field and of the teams
responsible for processing and storing the data in archives, without which
this work would not be possible. We thank Tamoghna Acharyya at Plymouth
Marine Laboratory for his initial contribution to this work. We thank the
NOAA (US) for making available the MOBY data and Yong Sung Kim for the help
in questions about MOBY data. BOUSSOLE is supported and funded by the
European Space Agency (ESA), the Centre National d'Etudes Spatiales (CNES),
the Centre National de la Recherche <?xmltex \hack{\newpage}?><?xmltex \hack{\vspace*{30mm}}?><?xmltex \hack{\noindent}?>Scientifique (CNRS), the Institut
National des Sciences de l'Univers (INSU), the Sorbonne Université (SU),
and the Institut de la Mer de Villefranche (IMEV). We thank ACRI-ST, ARGANS,
and ESA for access to the MERMAID Database (<uri>http://hermes.acri.fr/mermaid</uri>, last access: 18 December 2022).
We thank Annelies Hommersom, Pierre Yves Deschamps, and David Siegel for
allowing the use of MERMAID data for which they are Principal Investigators.
The AMT is funded by the UK Natural Environment Research Council through its
National Capability Long-term Single Centre Science Programme, Climate
Linked Atlantic Sector Science (grant number NE/R015953/1). This study
contributes to the international IMBeR project and is contribution number
375 of the AMT programme. We thank the British Oceanographic Data Centre
(BODC) for access to AMT data and in particular to Polly Hadziabdic and Rob
Thomas for their help in questions about the AMT data set. We thank Arwen
Bargery, Denise Cummings, Giorgio Dall'Olmo, Ella Darlington, Victoria Hill, Patrick Holligan, Gerald Moore, Emilio Suarez, and Glen Tarran for the
use of AMT data for which they are the data contributors. We thank Sam
Ahmed, Hui Feng, Alex Gilerson, Brent Holben, and Sherwin Ladner for allowing
the use of the AERONET-OC data for which they are Principal Investigators.
We also thank the Principal Investigators and site managers and site support
for AERONET-OC for sustaining the measurements, and the respective national
and international funding bodies for financial support. We also thank
Giuseppe Zibordi for data quality control and Brent Holben and his team from
NASA Goddard Space Flight Centre for making the data available online. The
AWI data set was supported by the captain, crew, and other scientists at the
specific German RVs (<italic>Meteor</italic>, <italic>Heincke</italic>, <italic>Maria S. Merian</italic>, <italic>Polarstern</italic>, and <italic>Sonne</italic>)
expeditions and funding by the Helmholtz Association (HGF Innovative Network
Funds Phytooptics, Helmholtz Infrastructure Initiative FRAM), the European
Union (Seventh Framework Programme SHIVA-226224FP7-ENV-2008- 1020 1), the
BMBF (OASIS FK03G0235A and ASTRA FK03G0243A), the DFG (#268020496–TRR
172 project C03 within the Transregional Collaborative Research Center
ArctiC Amplication: Climate Relevant Atmospheric 1023 and SurfaCe Processes,
and Feedback Mechanisms (AC)3), the collaborative project OLCI-PFT (ACRI-AWI
Offer #209-180104), and the ESA 656 S5P<inline-formula><mml:math id="M305" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>Innovation Theme 7 Ocean Colour
(S5POC) project (no. 4000127533/19/I-NS). The Australian Integrated Marine
Observing System (IMOS) and CSIRO are acknowledged for funding the Lucinda
AERONET-OC site. Data from IMOS were sourced from Australia's Integrated
Marine Observing System (IMOS) – IMOS is enabled by the National
Collaborative Research Infrastructure Strategy (NCRIS). We thank Janet
Anstee, Joey Crosswell, Britta Schaffelke, Bernadette Sloyan, Paul Thomson,
and Tom Trull for the use of the IMOS data for which they are Principle
Investigators. We thank Bob Bidigare, Matthew Church, Ricardo Letelier, and
Jasmine Nahorniak for making the HOT data available, and the National
Science Foundation for support of the HOT research (grant OCE 09-26766). We
thank Yves Dandonneau for allowing the use of GeP&amp;CO data. We thank ICES
database on the marine environment (Copenhagen, Denmark, 2014) for allowing
the use of their archived data, and Marilynn Sørensen for the help with
questions about the ICES data set. We thank all ICES contributors for their
data. We thank Eric Zettler and SEA Education Association. This study
includes data collected by the US Marine Biodiversity Observation Network
(MBON) funded under the US National Ocean Partnership Program through NASA
grant NNX14AP62A “National Marine Sanctuaries as Sentinel Sites for a
Demonstration Marine Biodiversity Observation Network (MBON)”. The CARIACO
Ocean Time-Series program also provided significant decade-long bio-optical
information used in this study. These data were obtained from NOMAD and
SeaBASS. We thank NASA, SeaBASS, and the Ocean Biology Processing Group
(OBPG) for access to SeaBASS and NOMAD data. We thank NASA for project
funding for data collection. We thank Chris Proctor from SeaBASS for his
valuable and prompt help in a variety of questions. We are deeply thankful
to the data contributors of NOMAD and SeaBASS: James Allen, Kevin Arrigo,
Dirk Aurin, Mike Behrenfeld, Kelsey Bisson, Emmanuel Boss, Chris Brown,
Dylan Catlett, Mary Luz Canon, Douglas Capone, Ken Carder, Carlos Del
Castillo, Alex Chekalyuk, Jay-Chung Chen, Dennis Clark, Javier Concha, Jorge
Corredor, Glenn Cota, Yves Dandonneau, Heidi Dierssen, David Eslinger, Piotr Flatau, Alex Gilerson, Joaquim Goes, Gwo-Ching Gong, Adriana Gonzalez-Silvera, Jason Graff, Nils Haentjens, Larry Harding, Jon Hare,
Sung-Ho Kang, Grace Kim, Gary Kirkpatrick, Oleg Kopelevich, Sasha Kramer,
Sam Laney, Pierre Larouche, Zhongping Lee, Ricardo Letelier, Marlon Lewis,
Stephane Maritorena, John Marra, Chuck McClain, Christophe Menkes, Mark
Miller, Allen Milligan, Ru Morrison, James Mueller, Ruben Negri, James Nelson, Norman Nelson, Mary Jane Perry, David Phinney, John Porter, Collin
Roesler, Joe Salisbury, David Siegel, Mike Sieracki, Jeffrey Smart, Raymond
Smith, James Spinhirne, Dariusz Stramski, Rick Stumpf, Ajit Subramaniam,
Lynne Talley, Chuck Trees, Ryan Vandermeulen, Toby Westberry, Ronald
Zaneveld, Eric Zettler and Richard Zimmerman. For the BIOCHEM data we thank
the Fisheries and Oceans Canada and the following data contributors: Diane
Archambault, Hughes Benoit, Esther Bonneau, Eugene Colbourne, Alain Gagne,
Yves Gagnon, Tom Hurlbut, Catherine Johnson, Pierre Joly, Maurice Levasseur,
Jean-Francois Lussier, Sonia Michaud, Patrick Ouellet, Jacques Plourde,
Stephane Plourde, Luc Savoie, Michael Scarratt, Philippe Schwab, Michel
Starr, and François Villeneuve. We also thank Laure Devine for the help
in processing the BIOCHEM data set. CalCOFI research is supported by
contributions from the participating agencies: The California State
Department of Fish and Wildlife, NOAA, National Marine Fisheries Service,
Southwest Fisheries Science Center, and the University of California,
Integrative Oceanography Division at the Scripps Institution of
Oceanography, UCSD. The authors would like to thank the Oceanic Platform of
the Canary Islands (PLOCAN) and its staff for making freely available the
use of this ESTOC data set. We thank the following MAREDAT data providers:
Robert Bidigare, Denise Cummings, Giacomo DiTullio, Chris Gallienne, Ralf Goericke, Patrick Holligan, David Karl, Michael Landry, Michael Lomas,
Michael Lucas, Jean-Claude Marty, Walker Smith, Rick Stumpf, Emilio Suarez,
Koji Suzuki, Maria Vernet, and Simon Wright. We thank Oscar Schofield,
Raymond Smith, and Maria Vernet for allowing the use of the PALMER data. Data
from the Palmer LTER data repository were supported by Office of Polar
Programs, NSF grants OPP-9011927, OPP-9632763, and OPP-0217282. We thank the
SeaDataNet Pan-European infrastructure for ocean and marine data management
(<uri>http://www.seadatanet.org</uri>, last access: 18 December 2022). We thank Emmanuel Boss for the TARA data.
Funding for the collection and processing of the TARA data set was provided
by NASA Ocean Biology and Biogeochemistry program under grants NNX11AQ14G,
NNX09AU43G, NNX13AE58G, and NNX15AC08G to the University of Maine. We would
like to honour the memory of Marcel Wernand, Tiffany Moisan, and Trevor Platt, authors who contributed to the previous versions.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e6587">This paper received funding from the
ESA OC-CCI project (grant number 4000101437/10/I-LG), the EUMETSAT “Multi-mission Ocean Colour Algorithm Prototyping”
(OMAPS), and the European Union's Horizon 2020 research and
innovation programme under grant agreement 810139: Project Portugal Twinning for Innovation and Excellence in Marine Science
and Earth Observation – PORTWIMS.</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e6593">This paper was edited by François G. Schmitt and reviewed by Andre Belo-Couto and two anonymous referees.</p>
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