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  <front>
    <journal-meta><journal-id journal-id-type="publisher">ESSD</journal-id><journal-title-group>
    <journal-title>Earth System Science Data</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ESSD</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Earth Syst. Sci. Data</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1866-3516</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/essd-11-1645-2019</article-id><title-group><article-title>The BernClim plant phenological data set from the canton of Bern
(Switzerland) 1970–2018</article-title><alt-title>BernClim plant phenological data set</alt-title>
      </title-group><?xmltex \runningtitle{BernClim plant phenological data set}?><?xmltex \runningauthor{T. Rutishauser et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff2">
          <name><surname>Rutishauser</surname><given-names>This</given-names></name>
          <email>this@kontextlabor.ch</email>
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Jeanneret</surname><given-names>François</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Brügger</surname><given-names>Robert</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Brugnara</surname><given-names>Yuri</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Röthlisberger</surname><given-names>Christian</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Bernasconi</surname><given-names>August</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>Bangerter</surname><given-names>Peter</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Portenier</surname><given-names>Céline</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Villiger</surname><given-names>Leonie</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff7">
          <name><surname>Lehmann</surname><given-names>Daria</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Meyer</surname><given-names>Lukas</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" deceased="yes" corresp="no" rid="aff2">
          <name><surname>Messerli</surname><given-names>Bruno</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Brönnimann</surname><given-names>Stefan</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Oeschger Centre for Climate Change Research, University of Bern,
Bern, 3012, Switzerland</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Institute of Geography, University of Bern, Bern, 3012, Switzerland</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Münchenstein, 4142, Switzerland</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Grossaffoltern, 3257, Switzerland</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Langnau, 3550, Switzerland</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>Einigen, 3646, Switzerland</institution>
        </aff>
        <aff id="aff7"><label>7</label><institution>GLOBE Switzerland, Bern, 3003, Switzerland</institution>
        </aff><author-comment content-type="deceased"><p/></author-comment>
      </contrib-group>
      <author-notes><corresp id="corr1">This Rutishauser (this@kontextlabor.ch)</corresp></author-notes><pub-date><day>11</day><month>November</month><year>2019</year></pub-date>
      
      <volume>11</volume>
      <issue>4</issue>
      <fpage>1645</fpage><lpage>1654</lpage>
      <history>
        <date date-type="received"><day>12</day><month>June</month><year>2019</year></date>
           <date date-type="rev-request"><day>20</day><month>June</month><year>2019</year></date>
           <date date-type="rev-recd"><day>25</day><month>September</month><year>2019</year></date>
           <date date-type="accepted"><day>2</day><month>October</month><year>2019</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2019 This Rutishauser et al.</copyright-statement>
        <copyright-year>2019</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://essd.copernicus.org/articles/11/1645/2019/essd-11-1645-2019.html">This article is available from https://essd.copernicus.org/articles/11/1645/2019/essd-11-1645-2019.html</self-uri><self-uri xlink:href="https://essd.copernicus.org/articles/11/1645/2019/essd-11-1645-2019.pdf">The full text article is available as a PDF file from https://essd.copernicus.org/articles/11/1645/2019/essd-11-1645-2019.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e233">In 1970, the Institute of Geography of the University of
Bern initiated the phenological observation network BernClim. Seasonality
information from plants, fog and snow was originally available for applications in
urban and regional planning and agricultural and touristic suitability and is
now a valuable data set for climate change impact studies. Covering the
growing season, volunteer observers record the dates of key development
stages of hazel (<italic>Corylus avellana</italic>), dandelion (<italic>Taraxacum officinale</italic>), apple
tree (<italic>Pyrus malus</italic>) and beech (<italic>Fagus sylvatica</italic>). All observations consist of
detailed site information, including location, altitude, exposition (aspect)
and inclination, that makes BernClim unique in its richness in detail on decadal
timescales. Quality control (QC) by experts and statistical analyses of the
data have been performed to flag impossible dates, dates outside the
biologically plausible range, repeated dates in the same year, stretches of
consecutive identical dates and statistically inconsistent dates (outliers
in time or in space). Here, we report BernClim data of 7414 plant
phenological observations from 1970 to 2018 from 1304 sites at 110 stations, the QC procedure and selected applications (Rutishauser et al., 2019: <ext-link xlink:href="https://doi.org/10.1594/PANGAEA.900102" ext-link-type="DOI">10.1594/PANGAEA.900102</ext-link>). The QC points to very good
internal consistency (only 0.2 % were flagged as internally inconsistent) and likely high quality of the data. BernClim data indicate a trend towards an extended growing season. They also track the regime shift in the late 1980s well to pronounced earlier dates like numerous other phenological records across the Northern Hemisphere.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e260">The seasonality of plants has been observed for centuries for tracking and
documenting plant agricultural practices (Schnelle, 1955; Demarée and
Rutishauser, 2011; Rutishauser, 2009; Pfister and White, 2018; Jeanneret et al., 2018). Systematic documentations started with the famous Kyoto cherry series as early as 801 CE (Aono and Kazui, 2008). Phenological phases indicate
growth cycle stages of annual and perennial plant life. The stages are
closely linked to environmental drivers such as light, temperature and
precipitation and are, thus, used as climate change impact indicators
(Menzel et al., 2006; IPCC, 2013) or serve as proxy data in climate
reconstructions (Rutishauser et al., 2008; Anderson et al., 2013; Ge et al.,
2014). For instance, the inventory of climate monitoring series of the Swiss
GCOS Office (MeteoSwiss, 2018) lists phenological records. Peñuelas et<?pagebreak page1646?> al. (2008) stressed the importance of phenological observations for climate
feedback processes that can only be studied when ground observational data
are available in a reasonable quality (Rutishauser, 2009).</p>
      <p id="d1e263">In Switzerland, the longest continuous phenological series reach back to 1808
(horse-chestnut bud burst – Geneva) and 1894 (cherry flowering – Liestal;
Defila and Clot, 2001; Defila et al., 2016). In Europe, single observations
are documented from the High Middle Ages onwards (Pfister and White, 2018).
Systematic collections started in the 18th century, e.g. several decades
from 1760 onwards by the Ökonomische Gesellschaft Bern (Pfister,
1999) and from 1869 to 1882 by the forestry department of the canton of
Bern (Vassella, 1997). In 1951, the Swiss Phenology Network (SPN) was initiated (Primault et al., 1957; Defila and Clot, 2001; Studer et al., 2005;
MeteoSwiss, 2018). Today, SPN comprises 160 stations, distributed across
various regions and elevations of Switzerland. Each year, observers record
the dates of leaf unfolding (needle appearance), flowering, fruit ripening,
leaf colouring and leaf-fall for selected wild plants and crops. These
observations cover 26 plant species and 69 phenophases (MeteoSwiss, 2018;
Auchmann et al., 2018).</p>
      <p id="d1e266">In 1969 and complementing the SPN, the BernClim phenological network was
established by the late Bruno Messerli of the Institute of Geography,
University of Bern (Messerli et al., 1978; Jeanneret and Rutishauser, 2012).
The aim was to provide a scientific basis for complex climate studies and
spatial planning, specifically for determining agricultural and touristic
suitability and assessing natural hazards. At higher spatial resolution and
precision, the BernClim network systematically documented specific
coordinates of observation sites, exposition (aspect) and inclination. Observation sites were
aggregated to stations.</p>
      <p id="d1e269">Quality control and assurance of phenological series have become
increasingly important for newly generated data as well as archive
observations. In Switzerland, efforts have been undertaken in a recent Swiss
GCOS project (Auchmann et al., 2018). Data sets have been compiled for Europe
within the Pan European Phenology Project PEP725 (<uri>http://www.pep725.eu/</uri>, last access:6 November 2019; Menzel et al., 2006) and for the USA (e.g.
Rosemartin et al., 2015). In addition, comparative analyses from networks and
citizen science projects suggest that different data sources are
complementary, depending on the research question. The most recent analyses
showed that observations from citizen science projects PhaenoNet and
OpenNature complement the data from the professional network SPN quality-wise
(Lehmann et al., 2018). Differences can be explained by the extent and uneven
distribution of the spatial coverage. Near-real-time visualisations and
comparisons can now be combined with archived observations back to 1951.</p>
      <p id="d1e276">In this paper we describe the plant phenological observations and quality
control efforts of the BernClim data set for phenological and climatological
analyses publicly available from PANGAEA (Rutishauser et al., 2019) and from
the PEP725 database, which will soon span half a century of data. In Sect. 2, we
provide background on the observation network and give an overview of the
data. Section 3 describes the results of the quality control. In Sect. 4
we then present selected results and draw conclusions in Sect. 5.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><label>Figure 1</label><caption><p id="d1e281">Map of the BernClim stations as well as stations of the Swiss Phenological Network (SPN; adapted from Jeanneret and Rutishauser, 2012).</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://essd.copernicus.org/articles/11/1645/2019/essd-11-1645-2019-f01.png"/>

      </fig>

</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Observation network and data</title>
      <p id="d1e298">The BernClim observation network focuses on the territory of the canton of
Bern (Switzerland; Fig. 1). The canton of Bern stretches across three
major Swiss landscapes, from the Jura Mountains across the Swiss Plateau to the
Alps, and spans an altitudinal range from 400 to 4000 m a.s.l. The climate in
the study region is determined by westerly, northwesterly and southwesterly
winds (i.e. from the Atlantic Ocean) and the passage of weather systems. In
summer, the Azores High is the dominant pressure system, alternating between
westerly and northerly flow situations. Regional wind systems such as
the föhn and the Bise may play an important role. Most areas receive an
adequate amount of precipitation throughout the year.</p>
      <p id="d1e301">BernClim was initiated as a 5-year research project funded by the canton
of Bern in 1969 and grew into an ongoing observation programme
coordinated by the University of Bern (Messerli et al., 1978; Jeanneret and
Rutishauser, 2012). Observations began in 1970. The main observation phase of
the project lasted from 1970 to 1974, with the final report compiled by
Messerli et al. (1978). A detailed overview, including how observers were
located and trained and details on observation guidelines and site selection,
is given in Jeanneret and Rutishauser (2012).</p>
      <p id="d1e304">Following the success of the first phase, the project was continued with
funding from diverse sources. Many observers continued, and the network has
been operated ever since by the Institute of Geography of the University of
Bern for the last 3 decades as a non-funded activity. Apart from serving as information for
spatial planning, the BernClim data have been used in education. While the
number of observers has steadily decreased, five have remained to the
present day. These long-term series are today also a valuable source of
information for science, particularly as there were only few observer
changes throughout the network.</p>
      <p id="d1e307">To cover all four seasons, observation periods were divided into growing and
resting periods. Plant phenology from early spring to late autumn documents
summers. During winter, fog presence and duration and snow cover were
observed daily from late autumn to early spring (Table 1).</p>

<?xmltex \floatpos{p}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e314">Complete BernClim observation programme. General flowering
(also defined as full flowering) refers to the development stage when 50 % of the blossoms are “open”.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="227.622047pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="128.037402pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Summer observations</oasis:entry>
         <oasis:entry colname="col2">Winter observations</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Plant phenology</oasis:entry>
         <oasis:entry colname="col2">Snow and fog</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Hazel (<italic>Corylus avellana</italic>, general flowering, pollen release) <?xmltex \hack{\hfill\break}?>Dandelion (<italic>Taraxacum officinale</italic>, general flowering) <?xmltex \hack{\hfill\break}?>Apple trees (<italic>Pyrus malus</italic>, general flowering) <?xmltex \hack{\hfill\break}?>Beech (<italic>Fagus sylvatica</italic>, leaf colouring)</oasis:entry>
         <oasis:entry colname="col2">Number of days with snow cover <?xmltex \hack{\hfill\break}?>Number of days with fog <?xmltex \hack{\hfill\break}?>(visibility 0–200 m or 200–1000 m) <?xmltex \hack{\hfill\break}?>Time of fog clearing</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Additional observations</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Date of wheat harvest (<italic>Triticum vulgare</italic>) <?xmltex \hack{\hfill\break}?>Larch (<italic>Larix decidua</italic>, needle colouring) <?xmltex \hack{\hfill\break}?>Coltsfoot (<italic>Tussilago farfara</italic>, general flowering) <?xmltex \hack{\hfill\break}?>Red elder (<italic>Sambucus racemosa</italic>, general flowering) <?xmltex \hack{\hfill\break}?>Rowan (<italic>Sorbus aucuparia</italic>, ripe fruits) <?xmltex \hack{\hfill\break}?>Potato (<italic>Solanum tuberosum</italic>, planting, general flowering, the end of harvest)</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e317">Note: winter observations daily at 07:00–08:00 LT.</p></table-wrap-foot></table-wrap>

      <?pagebreak page1648?><p id="d1e432">The definition of the plant phenological observations follows the official
instructions of MeteoSwiss (Jeanneret, 1971; Primault et al., 1957; Brügger and
Vassella, 2018). Overall, more than 200 volunteers were recruited for
observing in 1971 through the teacher training programme of the Institute of
Geography. A large number of observers have training in public-school
teaching or are family doctors, and they have a strong, intrinsic motivation for
observing natural phenomena and processes. Data were submitted from 180
stations in 1971, with station and site numbers decreasing since (Fig. 2).
The spatial representativity of stations strongly reflects population
density. All volunteers were asked to select a number of locally
representative sites (in the following “observation sites”) mostly in
cultivated systems. A comprehensive overview of the BernClim network was
published in Jeanneret and Rutishauser (2012).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><?xmltex \currentcnt{2}?><label>Figure 2</label><caption><p id="d1e437">Development of the number of stations in BernClim since
1970 (updated from Jeanneret and Rutishauser, 2012).</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://essd.copernicus.org/articles/11/1645/2019/essd-11-1645-2019-f02.png"/>

      </fig>

      <p id="d1e446">Phenological phases are defined by a morphological development phase of a
plant that has to be reached as well as a quantitative threshold. The
observation then is the date (day of year – DoY) when this threshold is
crossed. For instance, for the case of apple trees, general flowering is
reached when 50 % of the blossoms are “open”. The definition
of open is morphologically described in the observers'
instructions. Each plant and phenological phase was noted on a specific form
(Fig. 3).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><?xmltex \currentcnt{3}?><label>Figure 3</label><caption><p id="d1e451">Example of an observation sheet for plant phenological phases (Jeanneret and Rutishauser, 2012).</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://essd.copernicus.org/articles/11/1645/2019/essd-11-1645-2019-f03.png"/>

      </fig>

<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Data</title>
      <p id="d1e468">In this paper we describe 7414 quality-controlled plant phenological
observations from 1970 to 2018 (Rutishauser et al., 2019). Data were
collected at sites between altitudes from 410 to 1700 m a.s.l. Reported
plant species and phenological phases include the flowering of hazel
(<italic>Corylus avellana</italic>), dandelion (<italic>Taraxacum officinale</italic>) and apple trees (<italic>Pyrus malus</italic>) and the leaf colouring of beech (<italic>Fagus sylvatica</italic>). Each
observation record contains the site information, including a popular site
name (toponym), coordinates, altitude, exposition and inclination. Several
sites are combined with stations that are labelled with codes.</p>
      <p id="d1e483">The different phases of the network yield quite different numbers of
observations. During the intensive initial phase of the network, around
123 500 data were collected. A large number of observations were single
observations and were not quality checked for this study. The number of
stations and observation sites gradually decreased from initial values of 76 and
448, respectively. Presently there are five stations and observers. Figure 2
shows the number of stations as time series. Although the number of stations
decreased rapidly, even the current, very sparse network still has each of
the three major landscapes represented.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><?xmltex \currentcnt{4}?><label>Figure 4</label><caption><p id="d1e488">Example of an observation sheet for snow (Jeanneret and Rutishauser, 2012).</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://essd.copernicus.org/articles/11/1645/2019/essd-11-1645-2019-f04.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><label>Figure 5</label><caption><p id="d1e500">Example of an observation sheet for fog (Jeanneret and Rutishauser, 2012).</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://essd.copernicus.org/articles/11/1645/2019/essd-11-1645-2019-f05.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Raw data and quality control</title>
      <p id="d1e518">The observers received standard forms to fill out and send back by regular
mail. Figure 3 shows an example of a data sheet for plant phenophases.
Figures 4 and 5 show the form used for snow and fog, respectively. All
original observation sheets of plant, snow and fog observations are archived
at the University of Bern. During ongoing data rescue a large fraction have
been photographed. To date, only plant observations have been digitised and
controlled for publication.</p>
      <p id="d1e521">The quality control (QC) process consisted of several steps. First, the raw
data were read into a GIS for coordinate checking. Only wrong coordinates,
altitudes or location names were corrected (see Kottmann, 2008, for details).
Except for very obvious errors, which were deleted, the observed dates were
not changed.</p>
      <p id="d1e524">The second step consisted of an operational baseline QC, which was done by
an expert in biology, plant physiology and phenology (Robert Brügger).
This step included filling data gaps from the original paper records and
station history descriptions. During this procedure, observer changes were
systematically recorded in station documentations, including interviews with
observers (unpublished data).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e531">Plant-specific, biological limits in days of year (DoY)
with respect to five altitude ranges (MeteoSwiss, personal communication, 2019).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="11">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right" colsep="1"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right" colsep="1"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right" colsep="1"/>
     <oasis:colspec colnum="8" colname="col8" align="right"/>
     <oasis:colspec colnum="9" colname="col9" align="right" colsep="1"/>
     <oasis:colspec colnum="10" colname="col10" align="right"/>
     <oasis:colspec colnum="11" colname="col11" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Altitude</oasis:entry>
         <oasis:entry rowsep="1" namest="col2" nameend="col3" align="center" colsep="1"><inline-formula><mml:math id="M1" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 500 m a.s.l. </oasis:entry>
         <oasis:entry rowsep="1" namest="col4" nameend="col5" align="center" colsep="1">500–799 m  </oasis:entry>
         <oasis:entry rowsep="1" namest="col6" nameend="col7" align="center" colsep="1">800–999 m  </oasis:entry>
         <oasis:entry rowsep="1" namest="col8" nameend="col9" align="center" colsep="1">1000–1199 m </oasis:entry>
         <oasis:entry rowsep="1" namest="col10" nameend="col11" align="center"><inline-formula><mml:math id="M2" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 1200 m </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Phases</oasis:entry>
         <oasis:entry colname="col2">Min</oasis:entry>
         <oasis:entry colname="col3">Max</oasis:entry>
         <oasis:entry colname="col4">Min</oasis:entry>
         <oasis:entry colname="col5">Max</oasis:entry>
         <oasis:entry colname="col6">Min</oasis:entry>
         <oasis:entry colname="col7">Max</oasis:entry>
         <oasis:entry colname="col8">Min</oasis:entry>
         <oasis:entry colname="col9">Max</oasis:entry>
         <oasis:entry colname="col10">Min</oasis:entry>
         <oasis:entry colname="col11">Max</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Hazel, flowering</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M3" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">110</oasis:entry>
         <oasis:entry colname="col4">0</oasis:entry>
         <oasis:entry colname="col5">120</oasis:entry>
         <oasis:entry colname="col6">0</oasis:entry>
         <oasis:entry colname="col7">120</oasis:entry>
         <oasis:entry colname="col8">20</oasis:entry>
         <oasis:entry colname="col9">120</oasis:entry>
         <oasis:entry colname="col10">30</oasis:entry>
         <oasis:entry colname="col11">130</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Dandelion, flowering</oasis:entry>
         <oasis:entry colname="col2">80</oasis:entry>
         <oasis:entry colname="col3">130</oasis:entry>
         <oasis:entry colname="col4">90</oasis:entry>
         <oasis:entry colname="col5">150</oasis:entry>
         <oasis:entry colname="col6">90</oasis:entry>
         <oasis:entry colname="col7">150</oasis:entry>
         <oasis:entry colname="col8">100</oasis:entry>
         <oasis:entry colname="col9">150</oasis:entry>
         <oasis:entry colname="col10">100</oasis:entry>
         <oasis:entry colname="col11">170</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Apple tree, flowering</oasis:entry>
         <oasis:entry colname="col2">90</oasis:entry>
         <oasis:entry colname="col3">140</oasis:entry>
         <oasis:entry colname="col4">90</oasis:entry>
         <oasis:entry colname="col5">160</oasis:entry>
         <oasis:entry colname="col6">100</oasis:entry>
         <oasis:entry colname="col7">160</oasis:entry>
         <oasis:entry colname="col8">110</oasis:entry>
         <oasis:entry colname="col9">160</oasis:entry>
         <oasis:entry colname="col10">120</oasis:entry>
         <oasis:entry colname="col11">160</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Beech, leaf colouring</oasis:entry>
         <oasis:entry colname="col2">250</oasis:entry>
         <oasis:entry colname="col3">310</oasis:entry>
         <oasis:entry colname="col4">250</oasis:entry>
         <oasis:entry colname="col5">310</oasis:entry>
         <oasis:entry colname="col6">240</oasis:entry>
         <oasis:entry colname="col7">310</oasis:entry>
         <oasis:entry colname="col8">240</oasis:entry>
         <oasis:entry colname="col9">300</oasis:entry>
         <oasis:entry colname="col10">230</oasis:entry>
         <oasis:entry colname="col11">300</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e796">The third step comprised an automated flagging routine similar to Auchmann
et al. (2018). This automatic quality control of the BernClim data consisted
of six checks. For this purpose we formed “series”, which
refers to all events of the same phenological phase at the same site (i.e.
the same coordinates). This means that there can be a large number of series per
station and code. The first four tests use absolute dates; test 5 is
based on standardised series, while for test 6, for a given year, the
standardised dates from all series were re-standardised. The following flags
were set.</p>
      <p id="d1e799"><list list-type="bullet">
          <list-item>

      <p id="d1e804">Test 1 included impossible dates (day of year above 366, below <inline-formula><mml:math id="M4" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">366</mml:mn></mml:mrow></mml:math></inline-formula> or at 0 is
considered impossible).</p>
          </list-item>
          <list-item>

      <p id="d1e820">Test 2 included dates outside of the range indicated by MeteoSwiss (personal
communication, 2019; Table 2).</p>
          </list-item>
          <list-item>

      <p id="d1e826">Test 3 included non-first dates (if several dates are found in the same year, all
except the first were flagged).</p>
          </list-item>
          <list-item>

      <p id="d1e832">Test 4 included four consecutive identical dates after removing non-first dates of
the same year.</p>
          </list-item>
          <list-item>

      <p id="d1e838">Test 5 included dates outside of standard deviations (SD) of <inline-formula><mml:math id="M5" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>3  for each series
after removing non-first dates of the same year and only for series with a
minimum length of 10 (41 % of all values tested).</p>
          </list-item>
          <list-item>

      <p id="d1e852">Test 6 included dates outside of standard deviations of <inline-formula><mml:math id="M6" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>3 for all series for a
given year after removing non-first dates of the same year and only for
series with a minimum length of 10 and years with a minimum of 10
observations (40 % of all values tested). For this test, the standardised
dates were re-standardised across all stations for each year.</p>
          </list-item>
        </list></p>
      <p id="d1e864">The quality control found no impossible dates and no consecutive identical
dates; 5 dates (0.07 %) were outside of a SD of 3 per series, and 10 dates
(0.13 %) were outside of a SD of 3 for all series in a given year. These are very
low rates, which points to good internal consistency and likely good
quality of the data.</p>
      <p id="d1e867">There are many “non-firsts” (2.47 %) for which the original
documents sometimes provide explanations. Since these are deviations from
the observation instructions, we flagged them nevertheless. Interestingly,
we found a relatively high rate of dates outside the range given by
MeteoSwiss, namely 3.56 %. Of these, most (60 %) concerned the leaf
colouring of beech, and 22.7 % concerned the flowering of apple. The range
given by MeteoSwiss refers to a range with a SD of 3
per phase and altitude region.
This means that for a normal distribution, 0.3 % outliers are expected;
however, we find 10 times this amount. At the same time, only six are
picked up by the other tests, which indicates that most of these outliers
are consistent with the other observations both in space and time.</p>
      <p id="d1e870">The QC methods test for outliers and exceptionally wide distributions but
not for the opposite (too narrow) distributions. Here, it is noteworthy that
the data set has only one hazel flowering event before the start of the
year, whereas we might expect this to occur more frequently.</p>
      <p id="d1e874">Long series (<inline-formula><mml:math id="M7" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> years) were checked for temporal
inhomogeneities (caused, e.g. by a change of observed plant)<?pagebreak page1650?> following the
method described in Auchmann et al. (2018). In short, three different
statistical tests are applied to each phenological series, and the agreement
between the tests determines the significance of an inhomogeneity
(significant when at least two tests agree on an inhomogeneity). At least three
correlated reference series are required to run the tests: this requirement
limits the number of tested series to 51 (out of 56 long series). Only one
series was found to be significantly inhomogeneous (Fig. 6).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><?xmltex \currentcnt{6}?><label>Figure 6</label><caption><p id="d1e889">Inhomogeneous series for the leaf colouring of the beech in Wyssachen – Oeseliwaeldli
(bold black line). The coloured lines represent five other series of the leaf colouring of beech (reference series) in other parts of the community of Wyssachen. The leaf colouring in the inhomogeneous series occurs on average about 3 d later than expected after the year 2000 (red vertical line).</p></caption>
        <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://essd.copernicus.org/articles/11/1645/2019/essd-11-1645-2019-f06.png"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><?xmltex \currentcnt{7}?><label>Figure 7</label><caption><p id="d1e900">General flowering of hazel in BernClim (diamonds) and SPN (circles) data in 1971 <bold>(a)</bold> and 2017 <bold>(b)</bold>. The right figure also shows data from two citizen science projects, PhaenoNet (triangles) and OpenNature (squares; updated from Lehmann et al., 2018).</p></caption>
        <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://essd.copernicus.org/articles/11/1645/2019/essd-11-1645-2019-f07.png"/>

      </fig>

      <p id="d1e915">In summary, BernClim data are expert data and subject to uncertainties.
These depend on the observability of the phenomena and the speed of the
development. Spring phases are typically relatively clearly defined (<inline-formula><mml:math id="M8" display="inline"><mml:mo lspace="0mm">±</mml:mo></mml:math></inline-formula>1 d), whereas the autumn phases have larger uncertainties (typically
<inline-formula><mml:math id="M9" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>3.5 d; see Brügger, 1998).</p>
</sec>
<?pagebreak page1651?><sec id="Ch1.S4">
  <label>4</label><title>Analyses</title>
      <p id="d1e940">Figure 7 shows the day of year of hazel flowering in the BernClim network in
1971 (172 observations) and in 2017 (16 observations). The figure is
supplemented with data from the SPN as well as
from two citizen science projects, OpenNature and PhaenoNet, for 2017
(<uri>http://www.opennature.ch/</uri>, last access: 6 November 2019, <uri>https://www.phaenonet.ch/</uri>, last access: 6 November 2019). For the BernClim data, observations
from the same station are joined graphically. Contiguous diamonds thus show
the variation within one station across different observation sites, which
may be larger than that on a regional scale. Note that flowering occurred
ca. 40 d earlier in the year 2017 compared to 1971.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8"><?xmltex \currentcnt{8}?><label>Figure 8</label><caption><p id="d1e951">BernClim apple flowering dates from nine sites (grey lines) of Wyssachen station (710 to 760 m a.s.l.) Black lines and circles denote station mean dates.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://essd.copernicus.org/articles/11/1645/2019/essd-11-1645-2019-f08.png"/>

      </fig>

      <p id="d1e960">Several series cover more than 40 years. As an example for a long time
series, Fig. 8 shows the start of the blossom of the apple tree from nine sites
at Wyssachen. The series clearly shows a trend towards earlier flowering
dates over the observation period. The series also shows a shift in the late
1980s. This shift is well documented in many other series<?pagebreak page1652?> (see also Reid et
al., 2013). It is also found in European or even northern hemispheric spring
snow cover (Brönnimann, 2015). A change in late winter temperature around
the late 1980s, albeit smaller than in observations, is also found in forced
atmospheric model simulations, implying that part of this change was due to
an overlap of forcing factors such as greenhouse gases, sea-surface
temperatures (El Niño 1986–1987; La Niña 1988–1989), volcanic eruptions and other effects (Brönnimann et al., 2006). The BernClim data can thus
help to better analyse this stepwise climatic and ecological change.</p>
</sec>
<sec id="Ch1.S5">
  <label>5</label><title>Data availability</title>
      <p id="d1e972">The data presented and described in this paper are available in the data
repository PANGAEA: <ext-link xlink:href="https://doi.org/10.1594/PANGAEA.900103" ext-link-type="DOI">10.1594/PANGAEA.900103</ext-link> (Rutishauser et al., 2019).</p>
</sec>
<sec id="Ch1.S6" sec-type="conclusions">
  <label>6</label><title>Conclusions</title>
      <p id="d1e986">A plant phenological data set spanning almost 50 years is published as a
data set in PANGAEA. Subsequently the data will be added to the PEP725 data
and will also be available from the geoportal of the canton of Bern. The series
were quality controlled. It should be noted that BernClim data are expert
data and subject to uncertainties. Quality control procedures were performed
to flag uncertain observations.</p>
      <p id="d1e989">Although the number of stations decreased rapidly after the initial phase of
the network, five long-term series remained which allow a 50-year view with
almost no observer changes. Despite the sparseness, they still cover<?pagebreak page1653?> spatial
variability in climatically relevant plant development stages of four
species in three typical climate zones of Switzerland. Inhomogeneity tests
suggest that stepwise changes are rarely driven by observational artefacts
such as changes in observers, definitions or station changes, revealing
strong consistency within long time series that underlines the quality of the
data. In the future, the data series could be continued and merged with
citizen science data and platforms such as PhaenoNet and OpenNature (Lehmann
et al., 2018). As methodologies evolved, the integration of high-resolution
data sets in space is more easily combined with long-term data as the
BernClim observations.</p>
      <p id="d1e992">This paper only describes the phenological data. The rich (daily) winter
data remain to be explored further. BernClim data may help in constraining
further relevant indices such as the leaf area index or NDVI on a small scale. As
indicated by Rutishauser et al. (2007) and Stöckli et al. (2008), the data
have the potential to locally extend satellite data back to 1970, and they
have the potential to allow biological processes to be studied on the local level with
continuous evidence over 5 decades.</p>
</sec>

      
      </body>
    <back><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e999">TR, FJ and SB conceived the idea of the study. CR, AB, PB
and numerous observers collected the data. TR, YB, CP, LV, DL, LM and SB
processed and analysed the data. TR and SB prepared the paper, with
contributions from all co-authors.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e1005">The authors declare that they have no conflict of interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e1011">We would like to thank all observers of BernClim,
who devoted a lot of time and effort to collecting data for our network.
The paper is dedicated
to Bruno Messerli, who passed away in February 2019.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e1016">This research has been supported by the Swiss GCOS Office (project PhenoClass) and the Swiss National Science Foundation (project 139945).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e1022">This paper was edited by David Carlson and reviewed by two anonymous referees.</p>
  </notes><ref-list>
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seasons, J. Geophys. Res., 112, G04016, <ext-link xlink:href="https://doi.org/10.1029/2006JG000382" ext-link-type="DOI">10.1029/2006JG000382</ext-link>, 2007.</mixed-citation></ref>
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    <!--<article-title-html>The BernClim plant phenological data set from the canton of Bern (Switzerland) 1970–2018</article-title-html>
<abstract-html><p>In 1970, the Institute of Geography of the University of
Bern initiated the phenological observation network BernClim. Seasonality
information from plants, fog and snow was originally available for applications in
urban and regional planning and agricultural and touristic suitability and is
now a valuable data set for climate change impact studies. Covering the
growing season, volunteer observers record the dates of key development
stages of hazel (<i>Corylus avellana</i>), dandelion (<i>Taraxacum officinale</i>), apple
tree (<i>Pyrus malus</i>) and beech (<i>Fagus sylvatica</i>). All observations consist of
detailed site information, including location, altitude, exposition (aspect)
and inclination, that makes BernClim unique in its richness in detail on decadal
timescales. Quality control (QC) by experts and statistical analyses of the
data have been performed to flag impossible dates, dates outside the
biologically plausible range, repeated dates in the same year, stretches of
consecutive identical dates and statistically inconsistent dates (outliers
in time or in space). Here, we report BernClim data of 7414 plant
phenological observations from 1970 to 2018 from 1304 sites at 110 stations, the QC procedure and selected applications (Rutishauser et al., 2019: <a href="https://doi.org/10.1594/PANGAEA.900102" target="_blank">https://doi.org/10.1594/PANGAEA.900102</a>). The QC points to very good
internal consistency (only 0.2&thinsp;% were flagged as internally inconsistent) and likely high quality of the data. BernClim data indicate a trend towards an extended growing season. They also track the regime shift in the late 1980s well to pronounced earlier dates like numerous other phenological records across the Northern Hemisphere.</p></abstract-html>
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Rosemartin, A. H., Denny, E. G.,Weltzin, J. F., Marsh, L., Wilson, B. E., Mehdipoor, H., Zurita-Milla, Z., and Schwartz, M. D.: Lilac and
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Messerli, B., and Brönnimann, S: The BernClim plant phenological data set
from the Canton of Bern (Switzerland) 1970–2018, PANGAEA,
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prognostic phenology model, J. Geophys. Res.-Biogeo., 113, G04021,
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Studer, S., Appenzeller, C., and Defila, C.: Inter-annual variability and
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Clim. Change, 73, 395–414, <a href="https://doi.org/10.1007/s10584-005-6886-z" target="_blank">https://doi.org/10.1007/s10584-005-6886-z</a>, 2005.
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Vassella, A.: Phänologische Beobachtungen des Bernischen
Forstdienstes von 1869 bis 1882, Witterungseinflüsse und
Vergleich mit heutigen Beobachtungen, Buwal Umweltmaterialien 73, 9–75,
1997.
</mixed-citation></ref-html>--></article>
